Hub : Traits : Epididymis fat weight : ← : →

chr3:129,261,795-132,075,398

Trait: Epididymis fat weight

Best TWAS P=4.98e-09 · Best GWAS P=9.32e-09 conditioned to 1.00e+00

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Kif16b	isoform ratio	XM_006235108.4	0.07	2158	0.03	1.7e-04	5.68	1.33e-08	0.2	FALSE
BLA	Otor	gene expression	Otor	0.06	1963	0.01	1.2e-01	-5.71	1.15e-08	0.22	FALSE
BLA	Snrpb2	gene expression	Snrpb2	0.06	1954	0.01	5.2e-02	5.21	1.85e-07	0.4	FALSE
BLA	Pcsk2	mRNA stability	Pcsk2	0.27	1	0.09	1.5e-05	5.41	6.21e-08	0.36	FALSE
Brain	Rrbp1	alternative TSS	XM_039106605.1	0.03	1	0.02	3.5e-03	-5.4	6.56e-08	0.09	FALSE
Brain	Rrbp1	alternative TSS	XM_230637.10	0.03	1	0.03	1.7e-03	5.4	6.56e-08	0.13	FALSE
Brain	Otor	gene expression	Otor	0.1	1990	0.11	4.9e-10	-5.76	8.20e-09	0.48	FALSE
Brain	LOC120101719	intron excision ratio	chr3_130525654_130567132	0.13	39	0.2	2.1e-18	5.43	5.56e-08	0.44	FALSE
Brain	Snrpb2	intron excision ratio	chr3_130399307_130400989	0.04	1981	0.04	2.9e-04	5.85	4.98e-09	0.49	TRUE
IL	LOC120101719	alternative polyA	XR_005502515.1	0.24	1	0.29	1.1e-07	-5.38	7.50e-08	0.16	FALSE
IL	Pcsk2	gene expression	Pcsk2	0.5	1455	0.15	2.4e-04	5.25	1.52e-07	0.52	FALSE
IL	LOC120101719	isoform ratio	XR_005502514.1	0.26	1	0.34	5.5e-09	5.38	7.50e-08	0.19	FALSE
IL	LOC120101719	isoform ratio	XR_005502515.1	0.26	1	0.34	5.4e-09	-5.38	7.50e-08	0.19	FALSE
IL	LOC120101719	intron excision ratio	chr3_130525654_130567132	0.32	1	0.13	5.8e-04	5.52	3.40e-08	0.06	FALSE
IL	Dstn	mRNA stability	Dstn	0.58	237	0.36	1.8e-09	-5.19	2.14e-07	0.5	FALSE
LHb	Otor	gene expression	Otor	0.24	1990	0.01	1.8e-01	-5.77	7.83e-09	0.32	FALSE
LHb	Snrpb2	gene expression	Snrpb2	0.3	1981	0.14	3.6e-04	5.78	7.54e-09	0.42	FALSE
Liver	Kif16b	alternative polyA	XM_039105041.1	0.16	2158	0.13	6.2e-14	5.27	1.36e-07	0.54	FALSE
Liver	LOC120101717	gene expression	LOC120101717	0.05	2365	0.01	1.9e-02	-5.38	7.41e-08	0.2	FALSE
NAcc	Kif16b	alternative polyA	XM_039105041.1	0.06	2158	0.04	5.5e-06	5.8	6.69e-09	0.48	FALSE
NAcc	LOC120101719	alternative polyA	XR_005502514.1	0.11	1	0.15	1.4e-16	5.69	1.31e-08	0.73	FALSE
NAcc	Otor	gene expression	Otor	0.03	1	0.04	9.3e-06	5.42	5.86e-08	0.23	FALSE
NAcc	Pcsk2	gene expression	Pcsk2	0.09	1455	0.12	1.6e-13	5.43	5.50e-08	0.41	FALSE
NAcc	Snrpb2	gene expression	Snrpb2	0.04	1981	0.03	1.2e-04	5.8	6.68e-09	0.45	FALSE
NAcc	Kif16b	isoform ratio	XM_006235108.4	0.02	2158	0.02	1.9e-03	5.77	7.71e-09	0.36	FALSE
NAcc	LOC120101719	isoform ratio	XR_005502514.1	0.12	1	0.13	3.4e-15	5.69	1.31e-08	0.73	FALSE
NAcc	Snrpb2	intron excision ratio	chr3_130399307_130400989	0.08	1981	0.07	2.0e-08	5.72	1.10e-08	0.34	FALSE
NAcc	Snrpb2	intron excision ratio	chr3_130399832_130400989	0.08	1981	0.09	1.6e-10	-5.7	1.19e-08	0.4	FALSE
OFC	LOC120101719	alternative polyA	XR_005502514.1	0.35	43	0.3	7.6e-08	5.44	5.32e-08	0.47	FALSE
OFC	LOC120101719	alternative polyA	XR_005502515.1	0.35	86	0.29	1.6e-07	-5.5	3.83e-08	0.47	FALSE
OFC	LOC120101719	gene expression	LOC120101719	0.18	1	0.22	7.2e-06	-5.31	1.07e-07	0.06	FALSE
OFC	Pcsk2	gene expression	Pcsk2	0.56	1	0.36	1.7e-09	-5.38	7.50e-08	0.38	FALSE
OFC	LOC120101719	isoform ratio	XR_005502514.1	0.38	1	0.26	5.6e-07	5.25	1.53e-07	0.1	FALSE
PL	Kif16b	alternative polyA	XM_039105041.1	0.03	2158	0.03	3.3e-04	5.84	5.20e-09	0.46	FALSE
PL	LOC120101719	alternative polyA	XR_005502514.1	0.3	1	0.35	2.0e-39	5.3	1.16e-07	0.25	FALSE
PL	LOC120101719	alternative polyA	XR_005502515.1	0.34	1	0.37	4.9e-42	-5.44	5.18e-08	0.42	FALSE
PL	Otor	gene expression	Otor	0.04	1	0.06	5.0e-07	5.23	1.66e-07	0.18	FALSE
PL	Pcsk2	gene expression	Pcsk2	0.09	1455	0.15	2.6e-16	5.2	1.97e-07	0.36	FALSE
PL	LOC120101719	isoform ratio	XR_005502514.1	0.43	25	0.41	5.9e-48	5.29	1.22e-07	0.46	FALSE
PL	LOC120101719	intron excision ratio	chr3_130525654_130567132	0.26	1	0.4	3.9e-47	5.53	3.22e-08	0.53	FALSE
PL	LOC120101719	intron excision ratio	chr3_130529471_130567132	0.13	1	0.22	1.2e-23	-5.44	5.18e-08	0.42	FALSE
PL	Snrpb2	intron excision ratio	chr3_130399832_130400989	0.06	1981	0.06	2.7e-07	-5.79	7.13e-09	0.5	FALSE
PL	Pcsk2	mRNA stability	Pcsk2	0.04	1	0.03	1.1e-04	5.4	6.56e-08	0.27	FALSE
pVTA	Otor	gene expression	Otor	0.11	1	0.13	3.8e-06	5.3	1.15e-07	0.12	FALSE
pVTA	Pcsk2	gene expression	Pcsk2	0.46	29	0.38	2.6e-17	5.34	9.21e-08	0.5	FALSE
pVTA	Snrpb2	gene expression	Snrpb2	0.07	1954	0.06	1.9e-03	5.84	5.19e-09	0.39	FALSE
pVTA	Pcsk2	mRNA stability	Pcsk2	0.11	1	0.15	5.3e-07	5.21	1.84e-07	0.17	FALSE