Hub : Traits : Length with tail : ←

chr20:8,909-7,565,756

Trait: Length with tail

Best TWAS P = 9.69e-15 · Best GWAS P= 3.15e-11 conditioned to NaN

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Dhx16	alternative polyA	XM_039098480.2	0.1	1	0.07	1.4e-08	-5.71	1.14e-08	0.53	FALSE
Adipose	Dhx16	alternative polyA	XM_039098480.2	0.11	1	0.09	1.1e-09	-5.91	3.44e-09	0.78	FALSE
Adipose	Rpp21	alternative polyA	XM_063279381.1	0.02	1	0.02	2.3e-03	-5.38	7.44e-08	0.04	FALSE
Adipose	RT1-CE16	alternative polyA	XM_063279421.1	0.93	64	0.76	6.1e-129	-5.59	2.30e-08	0	FALSE
Adipose	RT1-CE16	alternative polyA	XM_063279423.1	0.93	53	0.75	1.1e-126	5.62	1.91e-08	0	FALSE
Adipose	RT1-N2	alternative polyA	XM_063279192.1	0.53	250	0.3	2.0e-33	6.19	6.07e-10	0.68	FALSE
Adipose	RT1-O1l1	alternative polyA	XM_039099255.2	0.35	13	0.3	9.7e-34	5.92	3.27e-09	0.68	FALSE
Adipose	RT1-O1l1	alternative polyA	XM_039099256.2	0.21	1	0.15	3.1e-16	5.56	2.63e-08	0.38	FALSE
Adipose	RT1-O1l1	alternative polyA	XM_039099257.2	0.4	14	0.55	3.0e-72	-5.79	7.06e-09	0.72	FALSE
Adipose	Bltp3a	alternative TSS	XM_039099274.2	0.25	2417	0.02	1.2e-03	-5.9	3.73e-09	0.64	FALSE
Adipose	Bltp3a	alternative TSS	XM_039099274.2	0.25	177	0.02	1.0e-03	-5.74	9.30e-09	0.74	FALSE
Adipose	Dhx16	alternative TSS	XM_039098481.2	0.06	1	0.02	3.2e-03	5.91	3.51e-09	0.64	FALSE
Adipose	Flot1	alternative TSS	NM_022701.2	0.03	8	0.02	5.9e-03	-6.7	2.02e-11	0.52	FALSE
Adipose	Flot1	alternative TSS	XM_063279497.1	0.05	3	0.04	3.7e-05	5.75	9.02e-09	0.59	FALSE
Adipose	Flot1	alternative TSS	NM_022701.2	0.03	1	0.02	5.5e-03	-5.76	8.35e-09	0.03	FALSE
Adipose	Flot1	alternative TSS	XM_063279499.1	0.08	5	0.04	4.3e-05	6.89	5.40e-12	0.62	FALSE
Adipose	RT1-M1-2	alternative TSS	XM_063279399.1	0.05	1799	0.05	2.8e-06	-5.87	4.32e-09	0.02	FALSE
Adipose	RT1-N2	alternative TSS	XM_039098781.2	0.44	4	0.42	8.8e-50	5.76	8.57e-09	0.69	FALSE
Adipose	RT1-N2	alternative TSS	NM_001008854.2	0.13	6	0.14	6.5e-15	-5.91	3.51e-09	0.66	FALSE
Adipose	RT1-N2	alternative TSS	XM_039098784.2	0.12	9	0.09	1.6e-10	5.76	8.65e-09	0.69	FALSE
Adipose	Abcf1	gene expression	Abcf1	0.04	1500	0.02	1.8e-03	5.59	2.28e-08	0.3	FALSE
Adipose	Atat1	gene expression	Atat1	0.08	1	0.07	6.0e-08	-5.23	1.73e-07	0.07	FALSE
Adipose	C20h6orf136	gene expression	C20h6orf136	0.06	1527	0.04	1.5e-05	5.82	6.01e-09	0.57	FALSE
Adipose	Cchcr1	gene expression	Cchcr1	0.43	2454	0.47	1.0e-58	-5.29	1.24e-07	0.66	FALSE
Adipose	Dhx16	gene expression	Dhx16	0.19	1524	0.18	8.5e-20	-6.61	3.92e-11	0.66	FALSE
Adipose	Gnl1	gene expression	Gnl1	0.07	9	0.06	6.2e-07	6.22	5.11e-10	0.61	FALSE
Adipose	Gtf2h4	gene expression	Gtf2h4	0.18	29	0.14	8.4e-16	6.54	6.01e-11	0.64	FALSE
Adipose	H2-M10.6l	gene expression	H2-M10.6l	0.39	14	0.28	2.0e-31	6.43	1.29e-10	0.42	FALSE
Adipose	H2-Q7-ps1	gene expression	H2-Q7-ps1	0.39	260	0.49	4.1e-62	-5.82	5.89e-09	0.71	FALSE
Adipose	Ilrun	gene expression	Ilrun	0.75	109	0.54	6.8e-72	-5.32	1.05e-07	0.85	FALSE
Adipose	LOC134483840	gene expression	LOC134483840	0.51	36	0.46	2.7e-56	6.76	1.37e-11	0.54	FALSE
Adipose	LOC134483849	gene expression	LOC134483849	0.42	27	0.44	2.1e-53	6.07	1.25e-09	0.64	FALSE
Adipose	Or12d14c	gene expression	Or12d14c	0.36	25	0.31	2.7e-35	6.57	4.95e-11	0.55	FALSE
Adipose	Or12d2c	gene expression	Or12d2c	0.21	1	0.16	4.1e-17	6.43	1.32e-10	0.6	FALSE
Adipose	Or1o2e	gene expression	Or1o2e	0.37	3464	0.32	3.6e-36	6.71	1.97e-11	0.55	FALSE
Adipose	Rnf39	gene expression	Rnf39	0.04	2800	0.01	8.8e-03	5.24	1.59e-07	0.04	FALSE
Adipose	Rps10	gene expression	Rps10	0.06	1	0.03	3.6e-04	5.84	5.14e-09	0.06	FALSE
Adipose	RT1-M1-2	gene expression	RT1-M1-2	0.61	205	0.64	8.3e-92	5.74	9.55e-09	0.02	FALSE
Adipose	RT1-M1-4	gene expression	RT1-M1-4	0.1	1913	0.04	8.3e-06	5.28	1.30e-07	0.03	FALSE
Adipose	RT1-M2	gene expression	RT1-M2	0.31	3851	0.21	1.3e-22	-6.61	3.80e-11	0.54	FALSE
Adipose	RT1-M6-2	gene expression	RT1-M6-2	0.45	257	0.54	1.0e-71	5.94	2.77e-09	0	FALSE
Adipose	RT1-N2	gene expression	RT1-N2	0.69	258	0.69	1.3e-106	5.22	1.81e-07	0.7	FALSE
Adipose	RT1-N3	gene expression	RT1-N3	0.35	26	0.33	1.1e-37	5.85	4.85e-09	0.68	FALSE
Adipose	RT1-O1l1	gene expression	RT1-O1l1	0.54	13	0.68	2.0e-103	-5.78	7.46e-09	0.72	FALSE
Adipose	Spdef	gene expression	Spdef	0.12	78	0.04	8.1e-06	-6.33	2.51e-10	0.9	FALSE
Adipose	Ubd	gene expression	Ubd	0.42	387	0.48	1.3e-60	-5.29	1.20e-07	0	FALSE
Adipose	Abcf1	isoform ratio	XM_017601783.3	0.04	6	0.03	2.1e-04	-5.27	1.33e-07	0.55	FALSE
Adipose	Dhx16	isoform ratio	XM_039098480.2	0.1	1524	0.08	2.2e-09	-5.94	2.91e-09	0.6	FALSE
Adipose	Nrm	isoform ratio	NM_212508.2	0.09	1524	0.08	5.4e-09	-5.46	4.73e-08	0.58	FALSE
Adipose	Nrm	isoform ratio	XM_039098800.2	0.09	1524	0.08	6.5e-09	5.63	1.84e-08	0.6	FALSE
Adipose	Rpp21	isoform ratio	XM_063279377.1	0.06	7	0.06	1.1e-07	5.66	1.55e-08	0.12	FALSE
Adipose	Rps10	isoform ratio	NM_031109.2	0.74	31	0.59	4.5e-81	5.67	1.47e-08	0.11	FALSE
Adipose	Rps10	isoform ratio	XM_063279576.1	0.69	24	0.54	7.1e-71	-5.68	1.38e-08	0.11	FALSE
Adipose	RT1-N2	isoform ratio	XM_017601671.3	0.32	1	0.33	1.1e-37	5.78	7.56e-09	0.66	FALSE
Adipose	RT1-N2	isoform ratio	XM_039098785.2	0.56	5	0.5	1.4e-63	-5.81	6.33e-09	0.69	FALSE
Adipose	RT1-O1l1	isoform ratio	XM_039099255.2	0.43	223	0.55	7.6e-73	5.88	4.21e-09	0.72	FALSE
Adipose	RT1-O1l1	isoform ratio	XM_039099257.2	0.45	252	0.56	7.8e-75	-5.89	3.96e-09	0.72	FALSE
Adipose	RT1-S2	isoform ratio	XM_063278970.1	0.26	1208	0.26	2.0e-28	-5.4	6.65e-08	0.69	FALSE
Adipose	RT1-T24-3	isoform ratio	XM_063279402.1	0.04	1390	0.03	8.2e-04	6.48	9.02e-11	0.39	FALSE
Adipose	Tmlhe	isoform ratio	XM_006255855.3	0.4	1	0.3	3.6e-33	-5.49	4.05e-08	0.36	FALSE
Adipose	H2-Q7-ps1	intron excision ratio	chr20_2629035_2629238	0.35	1164	0.05	3.8e-06	-6.85	7.58e-12	0.55	FALSE
Adipose	H2-Q7-ps1	intron excision ratio	chr20_2631404_2640514	0.23	7	0.04	1.2e-05	-6.69	2.29e-11	0.44	FALSE
Adipose	H2-Q7-ps1	intron excision ratio	chr20_2631404_2662623	0.2	1164	0.03	2.3e-04	-6.27	3.59e-10	0.44	FALSE
Adipose	H2-Q7-ps1	intron excision ratio	chr20_2637860_2638063	0.35	1164	0.05	3.8e-06	-6.85	7.58e-12	0.55	FALSE
Adipose	H2-Q7-ps1	intron excision ratio	chr20_2675633_2675825	0.27	1164	0.06	3.3e-07	6.4	1.52e-10	0.41	FALSE
Adipose	RT1-CE10	intron excision ratio	chr20_3302480_3382202	0.66	58	0.24	9.6e-27	-6.08	1.20e-09	0.35	FALSE
Adipose	RT1-CE10	intron excision ratio	chr20_3344457_3344635	0.36	89	0.11	3.3e-12	5.25	1.49e-07	0.34	FALSE
Adipose	RT1-CE11	intron excision ratio	chr20_3302480_3382202	0.66	58	0.24	9.6e-27	-6.08	1.20e-09	0.35	FALSE
Adipose	RT1-CE11	intron excision ratio	chr20_3344457_3344635	0.36	89	0.11	3.3e-12	5.25	1.49e-07	0.34	FALSE
Adipose	RT1-CE12	intron excision ratio	chr20_3302480_3382202	0.63	68	0.24	9.5e-27	-6.06	1.38e-09	0.35	TRUE
Adipose	RT1-CE13	intron excision ratio	chr20_3302480_3382202	0.61	69	0.24	1.2e-26	-6	2.03e-09	0.34	FALSE
Adipose	RT1-CE14	intron excision ratio	chr20_3302480_3382202	0.59	66	0.24	9.7e-27	-5.99	2.12e-09	0.36	FALSE
Adipose	RT1-CE15	intron excision ratio	chr20_3302480_3382202	0.57	57	0.24	8.4e-27	-6.01	1.84e-09	0.36	FALSE
Adipose	RT1-CE16	intron excision ratio	chr20_3302480_3382202	0.56	62	0.24	1.5e-26	-6.07	1.28e-09	0.36	FALSE
Adipose	RT1-M3-1	intron excision ratio	chr20_1332603_1332806	0.22	3466	0.14	1.4e-15	6.65	2.92e-11	0.56	FALSE
Adipose	RT1-M3-1	intron excision ratio	chr20_1332603_1347578	0.22	3466	0.15	7.7e-16	-6.65	2.85e-11	0.56	FALSE
Adipose	RT1-O1l1	intron excision ratio	chr20_2629035_2629238	0.35	1156	0.05	3.9e-06	-6.85	7.60e-12	0.55	FALSE
Adipose	RT1-O1l1	intron excision ratio	chr20_2631404_2640514	0.23	7	0.04	1.2e-05	-6.69	2.30e-11	0.44	FALSE
Adipose	RT1-O1l1	intron excision ratio	chr20_2631404_2662623	0.2	1156	0.03	2.3e-04	-6.28	3.38e-10	0.44	FALSE
Adipose	RT1-O1l1	intron excision ratio	chr20_2637860_2638063	0.35	1156	0.05	3.9e-06	-6.85	7.60e-12	0.55	FALSE
Adipose	RT1-O1l1	intron excision ratio	chr20_2675633_2675825	0.27	1156	0.06	3.4e-07	6.41	1.49e-10	0.41	FALSE
Adipose	RT1-S2	intron excision ratio	chr20_2622575_2622726	0.05	1	0.02	5.8e-03	5.38	7.44e-08	0.03	FALSE
Adipose	RT1-S2	intron excision ratio	chr20_2622575_2631555	0.05	1	0.02	5.8e-03	5.21	1.88e-07	0.03	FALSE
Adipose	RT1-S2	intron excision ratio	chr20_2631404_2640514	0.22	19	0.04	1.2e-05	-6.28	3.39e-10	0.44	FALSE
Adipose	RT1-S2	intron excision ratio	chr20_2631404_2662623	0.2	1208	0.03	2.2e-04	-6.27	3.54e-10	0.44	FALSE
Adipose	RT1-S3	intron excision ratio	chr20_2629035_2629238	0.34	1303	0.05	3.9e-06	-6.86	6.88e-12	0.52	FALSE
Adipose	RT1-S3	intron excision ratio	chr20_2637860_2638063	0.34	1303	0.05	3.9e-06	-6.86	6.88e-12	0.52	FALSE
Adipose	RT1-S3	intron excision ratio	chr20_2675633_2675825	0.25	1303	0.06	4.3e-07	6.43	1.27e-10	0.43	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2696283_2696461	0.76	33	0.13	1.4e-14	5.83	5.58e-09	0.46	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2696490_2696699	0.59	1357	0.15	1.4e-16	6.47	1.00e-10	0.47	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2746614_2746750	0.72	1	0.07	1.9e-08	-5.73	9.86e-09	0.56	FALSE
Adipose	Taf11	intron excision ratio	chr20_5958143_5958781	0.13	1	0	9.6e-02	-5.86	4.64e-09	0.03	FALSE
Adipose	Tmlhe	intron excision ratio	chr20_107697_113298	0.38	1	0.22	6.5e-24	-5.49	4.05e-08	0.36	FALSE
Adipose	Atat1	mRNA stability	Atat1	0.03	1531	0.03	7.8e-04	-6.46	1.07e-10	0.33	FALSE
Adipose	H2-M10.6l	mRNA stability	H2-M10.6l	0.4	36	0.43	6.5e-52	5.86	4.76e-09	0.11	FALSE
Adipose	LOC108353253	mRNA stability	LOC108353253	0.53	42	0.59	7.4e-81	5.78	7.37e-09	0	FALSE
Adipose	Ppp1r10	mRNA stability	Ppp1r10	0.03	1532	0.01	7.0e-03	6.71	1.91e-11	0.48	FALSE
Adipose	Rps10	mRNA stability	Rps10	0.06	42	0.02	6.6e-03	5.73	1.03e-08	0.17	FALSE
Adipose	RT1-T24-3	mRNA stability	RT1-T24-3	0.5	2	0.1	1.6e-11	-5.38	7.42e-08	0.46	FALSE
Adipose	Tmlhe	mRNA stability	Tmlhe	0.49	2589	0.38	3.5e-45	-5.77	7.87e-09	0.54	FALSE
BLA	Dhx16	alternative polyA	XM_039098480.2	0.39	1524	0.13	1.8e-07	-5.71	1.13e-08	0.6	FALSE
BLA	Dhx16	alternative polyA	XM_039098481.2	0.07	1	0.02	2.1e-02	5.52	3.33e-08	0.04	FALSE
BLA	RT1-M6-2	alternative polyA	NM_001008853.1	0.06	3124	0.01	6.2e-02	6.77	1.25e-11	0.12	FALSE
BLA	RT1-M6-2	alternative polyA	XM_017601696.2	0.06	3124	0.03	1.7e-02	-6.78	1.16e-11	0.16	FALSE
BLA	RT1-N2	alternative polyA	XM_039098782.2	0.3	4	0.16	5.7e-09	5.64	1.69e-08	0.68	FALSE
BLA	RT1-N2	alternative polyA	XM_039098782.2	0.22	1195	0.13	2.9e-07	6.61	3.74e-11	0.66	FALSE
BLA	RT1-O1l1	alternative polyA	XM_039099255.2	0.35	20	0.24	6.2e-13	5.33	9.77e-08	0.7	FALSE
BLA	RT1-O1l1	alternative polyA	XM_039099257.2	0.45	32	0.33	3.5e-18	-5.72	1.06e-08	0.71	FALSE
BLA	Cchcr1	alternative TSS	NM_001002822.2	0.14	1	0.07	1.6e-04	5.79	7.05e-09	0.18	FALSE
BLA	Cchcr1	alternative TSS	NM_001002822.2	0.13	1	0.06	2.4e-04	5.79	7.05e-09	0.16	FALSE
BLA	RT1-N2	alternative TSS	XM_039098781.2	0.19	1195	0.12	9.5e-07	5.9	3.65e-09	0.62	FALSE
BLA	RT1-T18	alternative TSS	XM_063279363.1	0.49	9	0.09	1.4e-05	-6.95	3.54e-12	0.67	FALSE
BLA	RT1-T18	alternative TSS	XM_063279365.1	0.86	11	0.12	5.5e-07	-5.55	2.78e-08	0.66	FALSE
BLA	Abcf1	gene expression	Abcf1	0.46	1500	0.31	9.8e-17	-6.37	1.87e-10	0.67	FALSE
BLA	Cchcr1	gene expression	Cchcr1	0.86	64	0.66	4.0e-46	6.02	1.70e-09	0.69	FALSE
BLA	Cdsn	gene expression	Cdsn	0.18	1	0.14	9.3e-08	5.79	6.97e-09	0.65	FALSE
BLA	Clic2	gene expression	Clic2	0.15	2656	0.08	3.8e-05	-6.19	5.88e-10	0.23	FALSE
BLA	Ddr1	gene expression	Ddr1	0.34	5	0.26	3.4e-14	6.5	8.15e-11	0.61	FALSE
BLA	Gabbr1	gene expression	Gabbr1	0.08	3649	0.05	1.5e-03	-6.72	1.88e-11	0.3	FALSE
BLA	Gtf2h4	gene expression	Gtf2h4	0.19	14	0.15	3.5e-08	6.16	7.23e-10	0.63	FALSE
BLA	H2-Q7-ps1	gene expression	H2-Q7-ps1	0.68	1164	0.52	5.3e-32	-5.85	5.06e-09	0.7	FALSE
BLA	Ilrun	gene expression	Ilrun	0.95	234	0.55	1.0e-34	-5.67	1.44e-08	0.89	FALSE
BLA	LOC120098827	gene expression	LOC120098827	0.37	1	0.24	3.4e-13	5.62	1.96e-08	0.42	FALSE
BLA	LOC134483840	gene expression	LOC134483840	0.33	3533	0.26	2.9e-14	6.79	1.14e-11	0.57	FALSE
BLA	LOC134483841	gene expression	LOC134483841	0.41	15	0.31	7.1e-17	5.21	1.88e-07	0.04	FALSE
BLA	LOC134483844	gene expression	LOC134483844	0.85	28	0.4	2.7e-22	-5.53	3.15e-08	0.51	FALSE
BLA	LOC134483846	gene expression	LOC134483846	0.79	43	0.71	4.3e-52	6.53	6.53e-11	0.67	FALSE
BLA	Mog	gene expression	Mog	0.32	17	0.19	1.9e-10	6.13	8.92e-10	0.01	FALSE
BLA	Or12d14c	gene expression	Or12d14c	0.07	3504	0.05	1.3e-03	-5.56	2.67e-08	0.04	FALSE
BLA	Pacsin1	gene expression	Pacsin1	0.78	13	0.42	3.4e-24	-5.5	3.73e-08	0.74	FALSE
BLA	Rps10	gene expression	Rps10	0.75	2410	0.57	9.5e-36	-5.49	4.13e-08	0.09	FALSE
BLA	RT1-M3-1	gene expression	RT1-M3-1	0.79	3466	0.57	4.1e-36	-6.5	7.90e-11	0.58	FALSE
BLA	RT1-M6-2	gene expression	RT1-M6-2	0.4	3124	0.44	1.6e-25	-5.47	4.45e-08	0	FALSE
BLA	RT1-N2	gene expression	RT1-N2	0.68	1195	0.63	1.4e-42	5.33	9.85e-08	0.71	FALSE
BLA	RT1-O1l1	gene expression	RT1-O1l1	0.73	1156	0.59	6.2e-38	-5.77	7.95e-09	0.72	FALSE
BLA	RT1-S2	gene expression	RT1-S2	0.65	65	0.62	6.6e-41	6.4	1.56e-10	0.69	FALSE
BLA	RT1-T18	gene expression	RT1-T18	0.62	1123	0.6	3.6e-39	-5.57	2.56e-08	0.72	FALSE
BLA	RT1-T24-2	gene expression	RT1-T24-2	0.08	1416	0.05	1.4e-03	5.9	3.62e-09	0.52	FALSE
BLA	Tcf19	gene expression	Tcf19	0.23	2456	0.18	7.0e-10	6.4	1.55e-10	0.63	FALSE
BLA	Trim15	gene expression	Trim15	0.06	1	0.03	8.1e-03	5.87	4.28e-09	0.04	FALSE
BLA	Vars2	gene expression	Vars2	0.17	4	0.08	7.1e-05	-5.31	1.09e-07	0.55	FALSE
BLA	Znrd1as1	gene expression	Znrd1as1	0.3	39	0.14	7.1e-08	6.31	2.88e-10	0.01	FALSE
BLA	Abcf1	isoform ratio	NM_001109883.2	0.22	7	0.19	2.4e-10	5.44	5.32e-08	0.62	FALSE
BLA	Abcf1	isoform ratio	XM_017601783.3	0.21	7	0.18	5.5e-10	-5.46	4.64e-08	0.62	FALSE
BLA	Cchcr1	isoform ratio	XM_063279369.1	0.06	48	0.04	3.6e-03	5.28	1.28e-07	0.45	FALSE
BLA	Dhx16	isoform ratio	NM_212496.2	0.13	1524	0.09	2.3e-05	5.22	1.80e-07	0.53	FALSE
BLA	Dhx16	isoform ratio	XM_039098481.2	0.08	1524	0.03	1.3e-02	-5.61	1.98e-08	0.43	FALSE
BLA	RT1-M6-2	isoform ratio	XM_017601696.2	0.1	3124	0.07	9.5e-05	-6.78	1.16e-11	0.34	FALSE
BLA	RT1-N2	isoform ratio	XM_017601671.3	0.3	1195	0.13	2.3e-07	6.09	1.14e-09	0.66	FALSE
BLA	RT1-N2	isoform ratio	XM_039098783.2	0.19	1195	0.14	8.4e-08	5.89	3.82e-09	0.67	FALSE
BLA	RT1-N2	isoform ratio	XM_039098785.2	0.49	1195	0.42	9.2e-24	-5.83	5.62e-09	0.71	FALSE
BLA	RT1-O1l1	isoform ratio	XM_039099255.2	0.52	1156	0.46	1.1e-26	6.32	2.60e-10	0.69	FALSE
BLA	RT1-O1l1	isoform ratio	XM_039099257.2	0.5	1156	0.44	2.7e-25	-6.22	5.12e-10	0.69	FALSE
BLA	RT1-S2	isoform ratio	NM_001008857.1	0.12	2	0.07	8.6e-05	5.7	1.18e-08	0.64	FALSE
BLA	RT1-S2	isoform ratio	XM_063278970.1	0.12	1	0.07	1.1e-04	-5.7	1.18e-08	0.2	FALSE
BLA	RT1-T18	isoform ratio	XR_010060736.1	0.14	29	0.09	1.7e-05	-5.3	1.18e-07	0.66	FALSE
BLA	RT1-T24-4	isoform ratio	NM_001008826.3	0.2	3	0.14	1.2e-07	5.82	5.89e-09	0.48	FALSE
BLA	Tmlhe	isoform ratio	XM_006255855.3	0.3	1	0.14	8.5e-08	-5.41	6.31e-08	0.23	FALSE
BLA	Abcf1	intron excision ratio	chr20_2807464_2811704	0.08	1500	0.03	6.9e-03	6.48	9.24e-11	0.31	FALSE
BLA	Dhx16	intron excision ratio	chr20_2868362_2869501	0.1	8	0.02	2.5e-02	-6.45	1.15e-10	0.29	FALSE
BLA	Dhx16	intron excision ratio	chr20_2868393_2869501	0.16	1524	0.06	4.2e-04	5.45	5.02e-08	0.47	FALSE
BLA	Flot1	intron excision ratio	chr20_2932310_2932607	0.12	1	0.05	1.2e-03	5.66	1.50e-08	0.05	FALSE
BLA	LOC134483846	intron excision ratio	chr20_2651165_2659663	0.73	51	0.4	8.8e-23	5.56	2.62e-08	0.66	FALSE
BLA	LOC134483846	intron excision ratio	chr20_2671263_2712862	0.38	38	0.23	1.4e-12	5.85	4.98e-09	0.43	FALSE
BLA	LOC134483846	intron excision ratio	chr20_2671263_2735001	0.38	22	0.24	6.1e-13	5.86	4.67e-09	0.43	FALSE
BLA	RT1-CE10	intron excision ratio	chr20_3280797_3281038	0.27	3056	0.04	3.7e-03	5.88	4.01e-09	0.43	FALSE
BLA	RT1-CE11	intron excision ratio	chr20_3280797_3281038	0.27	3055	0.04	3.7e-03	5.88	4.01e-09	0.43	FALSE
BLA	RT1-CE14	intron excision ratio	chr20_3280797_3281038	0.25	2648	0.04	4.0e-03	6.11	9.70e-10	0.42	FALSE
BLA	RT1-CE15	intron excision ratio	chr20_3280797_3281038	0.25	154	0.04	2.7e-03	6.95	3.78e-12	0.41	FALSE
BLA	RT1-CE16	intron excision ratio	chr20_3280797_3281038	0.26	2619	0.04	4.7e-03	6.28	3.42e-10	0.41	FALSE
BLA	RT1-M3-1	intron excision ratio	chr20_1332603_1332806	0.09	1	0.04	6.1e-03	6.54	6.18e-11	0.05	FALSE
BLA	RT1-M3-1	intron excision ratio	chr20_1333075_1333267	0.17	3466	0.07	1.3e-04	-6.32	2.70e-10	0.57	FALSE
BLA	RT1-M6-1	intron excision ratio	chr20_1573380_1573502	0.08	3304	0.01	1.1e-01	6.38	1.75e-10	0.07	FALSE
BLA	RT1-M6-1	intron excision ratio	chr20_1590453_1590575	0.13	3304	0.03	6.4e-03	-6.29	3.24e-10	0.04	FALSE
BLA	RT1-M6-2	intron excision ratio	chr20_1573380_1573502	0.08	3124	0.01	1.1e-01	6.41	1.44e-10	0.08	FALSE
BLA	RT1-M6-2	intron excision ratio	chr20_1590453_1590575	0.13	3124	0.03	6.7e-03	-6.31	2.76e-10	0.04	FALSE
BLA	RT1-T24-3	intron excision ratio	chr20_2693808_2695162	0.09	1	0.05	1.1e-03	5.41	6.39e-08	0.04	FALSE
BLA	RT1-T24-3	intron excision ratio	chr20_2695434_2695740	0.18	1	0.09	2.1e-05	-5.41	6.39e-08	0.06	FALSE
BLA	RT1-T24-3	intron excision ratio	chr20_2698887_2698993	0.11	1390	0.04	4.3e-03	5.3	1.14e-07	0.37	FALSE
BLA	RT1-T24-4	intron excision ratio	chr20_2693808_2695162	0.09	1	0.01	5.2e-02	5.54	3.03e-08	0.04	FALSE
BLA	RT1-T24-4	intron excision ratio	chr20_2695434_2695740	0.17	10	0.06	6.8e-04	-5.38	7.60e-08	0.52	FALSE
BLA	Tmlhe	intron excision ratio	chr20_113474_122979	0.79	150	0.47	5.2e-28	-5.34	9.31e-08	0.53	FALSE
BLA	Dhx16	mRNA stability	Dhx16	0.25	13	0.25	2.1e-13	5.79	6.85e-09	0.65	FALSE
BLA	H2-M10.6l	mRNA stability	H2-M10.6l	0.35	1	0.22	4.1e-12	5.33	9.95e-08	0.32	FALSE
BLA	LOC134483846	mRNA stability	LOC134483846	0.81	1390	0.64	2.6e-43	5.79	6.90e-09	0.66	FALSE
BLA	Rps10	mRNA stability	Rps10	0.38	1	0.27	2.3e-14	5.34	9.14e-08	0.07	FALSE
BLA	RT1-M6-2	mRNA stability	RT1-M6-2	0.31	30	0.32	1.1e-17	-5.89	3.96e-09	0	FALSE
BLA	Tmlhe	mRNA stability	Tmlhe	0.2	21	0.11	2.5e-06	-5.67	1.43e-08	0.48	FALSE
BLA	Znrd1as1	mRNA stability	Znrd1as1	0.19	28	0.13	2.2e-07	6.27	3.67e-10	0.02	FALSE
Brain	Dhx16	alternative polyA	XM_039098480.2	0.45	46	0.4	2.0e-39	-5.92	3.25e-09	0.64	FALSE
Brain	Dhx16	alternative polyA	XM_039098480.2	0.46	57	0.41	4.3e-41	-5.91	3.52e-09	0.65	FALSE
Brain	Dhx16	alternative polyA	XM_039098481.2	0.23	1524	0.15	6.3e-14	7.04	1.96e-12	0.63	FALSE
Brain	RT1-M6-2	alternative polyA	NM_001008853.1	0.14	281	0.1	3.0e-09	5.66	1.52e-08	0	FALSE
Brain	RT1-M6-2	alternative polyA	XM_017601696.2	0.14	143	0.09	1.5e-08	-5.44	5.23e-08	0	FALSE
Brain	RT1-N2	alternative polyA	XM_039098782.2	0.36	30	0.32	7.5e-31	7	2.61e-12	0.7	FALSE
Brain	RT1-N2	alternative polyA	XM_039098782.2	0.36	29	0.33	8.7e-32	6.87	6.53e-12	0.7	FALSE
Brain	RT1-O1l1	alternative polyA	XM_039099255.2	0.45	79	0.47	3.3e-48	5.35	8.77e-08	0.71	FALSE
Brain	RT1-O1l1	alternative polyA	XM_039099257.2	0.54	163	0.54	1.7e-59	-5.49	3.96e-08	0.71	FALSE
Brain	RT1-S2	alternative polyA	NM_001008857.1	0.1	12	0.06	4.4e-06	5.57	2.58e-08	0.66	FALSE
Brain	RT1-S2	alternative polyA	XM_063278970.1	0.1	13	0.06	4.8e-06	-5.54	3.04e-08	0.66	FALSE
Brain	RT1-T24-3	alternative polyA	XM_063279403.1	0.16	4	0.12	2.8e-11	-5.31	1.09e-07	0.62	FALSE
Brain	RT1-T24-3	alternative polyA	XM_063279403.1	0.16	1390	0.13	2.5e-12	-5.32	1.06e-07	0.61	FALSE
Brain	Trim15	alternative polyA	NM_001291382.2	0.08	2465	0.05	2.9e-05	-6.02	1.70e-09	0.01	FALSE
Brain	Trim15	alternative polyA	XM_008772685.4	0.07	2465	0.05	2.9e-05	6.17	6.96e-10	0.03	FALSE
Brain	Zfp57	alternative polyA	NM_213565.4	0.08	3517	0.04	2.1e-04	6.14	8.12e-10	0.26	FALSE
Brain	Zfp57	alternative polyA	XM_063279194.1	0.08	3517	0.04	2.3e-04	-6.13	8.72e-10	0.25	FALSE
Brain	Dhx16	alternative TSS	XM_039098484.2	0.06	1524	0.03	6.8e-04	6.53	6.64e-11	0.42	FALSE
Brain	RT1-T18	alternative TSS	XM_063279365.1	0.21	1	0.22	9.7e-21	-5.25	1.51e-07	0.1	FALSE
Brain	RT1-T24-3	alternative TSS	NM_001166403.1	0.07	1	0.06	1.2e-06	-5.64	1.71e-08	0.4	FALSE
Brain	RT1-T24-3	alternative TSS	XM_063279401.1	0.07	1	0.07	7.2e-07	5.69	1.28e-08	0.48	FALSE
Brain	Cchcr1	gene expression	Cchcr1	0.74	97	0.65	3.7e-79	5.92	3.13e-09	0.68	FALSE
Brain	Ddr1	gene expression	Ddr1	0.14	1	0.11	1.3e-10	5.86	4.54e-09	0.74	FALSE
Brain	Dhx16	gene expression	Dhx16	0.53	119	0.43	6.9e-43	-5.35	8.94e-08	0.65	FALSE
Brain	Fkbp5	gene expression	Fkbp5	0.13	6	0.03	1.9e-03	5.86	4.76e-09	0.53	FALSE
Brain	Gtf2h4	gene expression	Gtf2h4	0.14	1	0.11	5.3e-10	5.85	5.04e-09	0.72	FALSE
Brain	H2-M10.6l	gene expression	H2-M10.6l	0.63	32	0.47	3.5e-49	-5.23	1.68e-07	0	FALSE
Brain	Ilrun	gene expression	Ilrun	0.91	21	0.71	4.0e-92	-5.72	1.07e-08	0.88	FALSE
Brain	LOC120098968	gene expression	LOC120098968	0.2	14	0.15	9.7e-14	5.5	3.75e-08	0.44	FALSE
Brain	LOC134483840	gene expression	LOC134483840	0.35	3533	0.32	3.9e-30	6.23	4.80e-10	0.57	FALSE
Brain	LOC134483844	gene expression	LOC134483844	0.57	1	0.19	1.5e-17	-5.56	2.65e-08	0.64	FALSE
Brain	Nudt3	gene expression	Nudt3	0.24	26	0.2	3.5e-18	5.62	1.86e-08	0.56	FALSE
Brain	Pacsin1	gene expression	Pacsin1	0.42	1	0.17	3.1e-15	-5.38	7.48e-08	0.08	FALSE
Brain	RT1-M3-1	gene expression	RT1-M3-1	0.65	3466	0.57	6.5e-65	-5.39	7.07e-08	0.56	FALSE
Brain	RT1-M6-1	gene expression	RT1-M6-1	0.18	30	0.17	4.4e-16	-6.1	1.09e-09	0	FALSE
Brain	RT1-O1l1	gene expression	RT1-O1l1	0.56	73	0.62	1.6e-72	-5.9	3.75e-09	0.71	FALSE
Brain	RT1-T18	gene expression	RT1-T18	0.48	30	0.58	7.2e-67	-5.7	1.22e-08	0.72	FALSE
Brain	Spdef	gene expression	Spdef	0.32	95	0.19	2.3e-17	-5.26	1.46e-07	0.03	FALSE
Brain	Tcf19	gene expression	Tcf19	0.26	2456	0.21	1.4e-19	5.94	2.88e-09	0.49	FALSE
Brain	Trim10	gene expression	Trim10	0.04	1	0.04	2.9e-04	5.5	3.89e-08	0.03	FALSE
Brain	Trim15	gene expression	Trim15	0.07	2465	0.06	3.4e-06	6.45	1.15e-10	0.15	FALSE
Brain	Ubd	gene expression	Ubd	0.21	3671	0.16	1.3e-14	6.66	2.81e-11	0.45	FALSE
Brain	Zfp57	gene expression	Zfp57	0.05	3517	0.02	1.0e-02	5.51	3.68e-08	0.05	FALSE
Brain	Znrd1as1	gene expression	Znrd1as1	0.35	1	0.28	9.7e-26	5.63	1.75e-08	0.02	FALSE
Brain	Abcf1	isoform ratio	NM_001109883.2	0.43	28	0.44	1.1e-44	5.32	1.03e-07	0.65	FALSE
Brain	Abcf1	isoform ratio	XM_017601783.3	0.44	1500	0.44	1.8e-44	-5.86	4.63e-09	0.65	FALSE
Brain	Dhx16	isoform ratio	NM_212496.2	0.27	1	0.23	2.3e-21	5.56	2.69e-08	0.33	FALSE
Brain	Dhx16	isoform ratio	XM_039098480.2	0.45	53	0.46	1.5e-47	-5.78	7.43e-09	0.64	FALSE
Brain	Gabbr1	isoform ratio	NM_031028.3	0.05	3649	0.04	1.3e-04	-6.91	4.90e-12	0.52	FALSE
Brain	Rpp21	isoform ratio	NM_001002831.1	0.05	3	0.03	8.1e-04	-5.21	1.86e-07	0.34	FALSE
Brain	RT1-CE16	isoform ratio	XM_063279422.1	0.06	2619	0.05	2.8e-05	-5.28	1.30e-07	0.27	FALSE
Brain	RT1-M6-2	isoform ratio	XM_017601696.2	0.23	19	0.24	3.7e-22	-6.36	1.98e-10	0	FALSE
Brain	RT1-M6-2	isoform ratio	XM_063279325.1	0.15	170	0.16	7.2e-15	6.85	7.14e-12	0	FALSE
Brain	RT1-N2	isoform ratio	XM_039098785.2	0.74	40	0.54	6.2e-60	-5.47	4.61e-08	0.71	FALSE
Brain	RT1-O1l1	isoform ratio	XM_039099255.2	0.54	61	0.66	6.0e-82	5.43	5.74e-08	0.72	FALSE
Brain	RT1-O1l1	isoform ratio	XM_039099257.2	0.55	101	0.65	2.7e-79	-5.56	2.66e-08	0.71	FALSE
Brain	RT1-S2	isoform ratio	NM_001008857.1	0.26	1	0.24	3.9e-22	5.41	6.25e-08	0.2	FALSE
Brain	RT1-S2	isoform ratio	XM_063278970.1	0.26	28	0.23	2.6e-21	-5.91	3.52e-09	0.68	FALSE
Brain	RT1-T18	isoform ratio	XR_010060737.1	0.47	1	0.1	1.5e-09	5.81	6.10e-09	0.71	FALSE
Brain	RT1-T24-3	isoform ratio	XM_063279402.1	0.06	1	0.06	7.1e-06	5.33	9.95e-08	0.08	FALSE
Brain	RT1-T24-4	isoform ratio	NM_001008826.3	0.27	1357	0.2	2.6e-18	6.37	1.92e-10	0.42	FALSE
Brain	Tmlhe	isoform ratio	XM_039098401.2	0.1	2589	0.06	2.8e-06	-5.86	4.73e-09	0	FALSE
Brain	Zfp57	isoform ratio	NM_213565.4	0.07	1	0.06	3.9e-06	5.87	4.32e-09	0.05	FALSE
Brain	Zfp57	isoform ratio	XM_039098787.2	0.07	3517	0.04	1.2e-04	-6.86	7.05e-12	0.57	FALSE
Brain	Abcf1	intron excision ratio	chr20_2807464_2812594	0.38	1500	0.17	1.1e-15	-6.18	6.52e-10	0.65	FALSE
Brain	Abcf1	intron excision ratio	chr20_2811750_2812594	0.21	21	0.1	2.4e-09	5.32	1.03e-07	0.63	FALSE
Brain	Dhx16	intron excision ratio	chr20_2868393_2869501	0.21	1524	0.09	2.7e-08	6.02	1.79e-09	0.61	FALSE
Brain	Gabbr1	intron excision ratio	chr20_1491246_1494180	0.07	3649	0.02	6.1e-03	6.01	1.83e-09	0.22	FALSE
Brain	Prr3	intron excision ratio	chr20_2798224_2798492	0.04	1496	0.02	1.2e-02	-6.34	2.29e-10	0.24	FALSE
Brain	RT1-M6-1	intron excision ratio	chr20_1590682_1591952	0.06	3304	0.02	8.9e-03	-5.53	3.29e-08	0.02	FALSE
Brain	RT1-M6-2	intron excision ratio	chr20_1590682_1591952	0.06	3124	0.02	8.5e-03	-5.53	3.17e-08	0.02	FALSE
Brain	RT1-S3	intron excision ratio	chr20_2676612_2677147	0.05	4	0.03	8.0e-04	5.36	8.39e-08	0.15	FALSE
Brain	RT1-T24-4	intron excision ratio	chr20_2746380_2746567	0.06	1357	0.03	1.9e-03	5.85	4.80e-09	0.41	FALSE
Brain	Slc26a8	intron excision ratio	chr20_6733387_6749436	0.04	45	0.03	1.3e-03	-5.98	2.26e-09	0.19	TRUE
Brain	Tmlhe	intron excision ratio	chr20_107697_110960	0.13	1	0.07	1.6e-07	-5.68	1.38e-08	0.6	FALSE
Brain	Tmlhe	intron excision ratio	chr20_107697_113298	0.17	2589	0.13	3.5e-12	-5.65	1.61e-08	0.53	FALSE
Brain	Tmlhe	intron excision ratio	chr20_111063_113298	0.12	1	0.1	8.5e-10	5.41	6.31e-08	0.26	FALSE
Brain	Tmlhe	intron excision ratio	chr20_113474_122979	0.21	19	0.16	2.2e-14	-5.5	3.84e-08	0.53	FALSE
Brain	Znrd1as1	intron excision ratio	chr20_1592067_1595158	0.03	2915	0.01	1.7e-02	6.89	5.77e-12	0.38	FALSE
Brain	Znrd1as1	intron excision ratio	chr20_1595233_1599935	0.05	17	0.04	1.3e-04	5.63	1.75e-08	0.01	FALSE
Brain	Atat1	mRNA stability	Atat1	0.06	1531	0.04	6.6e-05	-5.28	1.28e-07	0.55	FALSE
Brain	Cchcr1	mRNA stability	Cchcr1	0.34	1	0.37	1.4e-35	-5.78	7.34e-09	0.66	FALSE
Brain	Dhx16	mRNA stability	Dhx16	0.46	46	0.63	4.8e-75	5.77	8.13e-09	0.65	FALSE
Brain	Nudt3	mRNA stability	Nudt3	0.09	4	0.08	3.4e-08	5.53	3.23e-08	0.12	FALSE
Brain	RT1-M6-2	mRNA stability	RT1-M6-2	0.76	51	0.54	5.4e-60	-6.39	1.65e-10	0	FALSE
Brain	Tmlhe	mRNA stability	Tmlhe	0.5	182	0.47	1.6e-49	-5.67	1.44e-08	0.53	FALSE
Brain	Trim15	mRNA stability	Trim15	0.06	32	0.04	1.2e-04	6.45	1.13e-10	0.04	FALSE
Brain	Znrd1as1	mRNA stability	Znrd1as1	0.22	1	0.17	4.6e-16	5.49	4.04e-08	0.01	FALSE
Eye	Mrps18b	alternative polyA	NM_212534.2	0.43	1532	0.05	5.8e-02	6.55	5.84e-11	0.2	FALSE
Eye	Mrps18b	alternative polyA	XM_039098476.2	0.44	1532	0.06	5.1e-02	-6.56	5.27e-11	0.2	FALSE
Eye	RT1-CE4	alternative polyA	XM_039098960.2	0.44	24	0.1	1.3e-02	-5.22	1.78e-07	0.16	FALSE
Eye	RT1-O1l1	alternative polyA	XM_039099255.2	0.65	1156	0.15	3.1e-03	6.13	8.94e-10	0.34	FALSE
Eye	LOC134483846	gene expression	LOC134483846	0.67	1390	0.24	1.5e-04	5.57	2.57e-08	0.4	FALSE
Eye	Rps10	gene expression	Rps10	0.78	42	0.08	2.2e-02	-5.51	3.64e-08	0.31	FALSE
Eye	RT1-M6-2	gene expression	RT1-M6-2	0.67	3124	0.09	1.8e-02	6.67	2.61e-11	0.21	FALSE
Eye	Znrd1as1	gene expression	Znrd1as1	0.61	1	0.14	3.8e-03	5.63	1.75e-08	0.05	FALSE
Eye	RT1-O1l1	isoform ratio	XM_039099255.2	0.69	1156	0.29	2.4e-05	5.99	2.05e-09	0.54	FALSE
Eye	H2-Q7-ps1	intron excision ratio	chr20_2631404_2662623	0.76	1164	0.19	7.7e-04	-6.88	5.95e-12	0.27	FALSE
Eye	RT1-O1l1	intron excision ratio	chr20_2631404_2662623	0.76	1156	0.19	7.7e-04	-6.88	6.03e-12	0.27	FALSE
Eye	RT1-S2	intron excision ratio	chr20_2631404_2662623	0.77	1208	0.19	7.6e-04	-6.88	5.98e-12	0.27	FALSE
Eye	RT1-CE4	mRNA stability	RT1-CE4	0.39	3147	0.07	3.2e-02	5.39	6.98e-08	0.13	FALSE
IC	RT1-N2	alternative polyA	XM_039098782.2	0.72	71	0.11	3.7e-05	5.22	1.80e-07	0.52	FALSE
IC	RT1-O1l1	alternative polyA	XM_039099257.2	0.5	1156	0.28	5.4e-12	-6	2.01e-09	0.7	FALSE
IC	Trim26	alternative polyA	NM_001011665.3	0.39	1	0.24	1.9e-10	-5.33	9.95e-08	0.01	FALSE
IC	Trim26	alternative polyA	XM_039098637.2	0.38	1	0.24	1.5e-10	5.33	9.95e-08	0.01	FALSE
IC	Abcf1	gene expression	Abcf1	0.54	1500	0.37	2.9e-16	-5.3	1.19e-07	0.6	FALSE
IC	Cchcr1	gene expression	Cchcr1	0.82	100	0.46	2.0e-21	5.81	6.09e-09	0.65	FALSE
IC	LOC120098827	gene expression	LOC120098827	0.23	1	0.14	2.2e-06	5.56	2.64e-08	0.12	FALSE
IC	LOC120098968	gene expression	LOC120098968	0.17	1	0.1	6.2e-05	5.73	9.86e-09	0.11	FALSE
IC	LOC134483840	gene expression	LOC134483840	0.47	3533	0.31	1.2e-13	6.36	2.04e-10	0.58	FALSE
IC	LOC134483844	gene expression	LOC134483844	0.89	1	0.28	4.1e-12	-5.84	5.28e-09	0.9	FALSE
IC	LOC134483846	gene expression	LOC134483846	0.85	46	0.51	1.1e-24	6.32	2.67e-10	0.65	FALSE
IC	Mog	gene expression	Mog	0.25	1	0.13	4.2e-06	5.62	1.93e-08	0.03	FALSE
IC	Nudt3	gene expression	Nudt3	0.5	2415	0.29	1.4e-12	5.52	3.43e-08	0.84	FALSE
IC	Pacsin1	gene expression	Pacsin1	0.18	1	0.12	1.0e-05	-5.66	1.47e-08	0.07	FALSE
IC	Rps10	gene expression	Rps10	0.68	1	0.41	1.2e-18	-5.3	1.17e-07	0.06	FALSE
IC	RT1-M1-4	gene expression	RT1-M1-4	0.19	20	0.07	4.5e-04	5.5	3.76e-08	0.1	FALSE
IC	RT1-M3-1	gene expression	RT1-M3-1	0.76	3466	0.52	2.5e-25	-6.14	8.28e-10	0.57	FALSE
IC	RT1-M4	gene expression	RT1-M4	0.48	35	0.28	3.4e-12	-5.54	3.01e-08	0	FALSE
IC	RT1-O1l1	gene expression	RT1-O1l1	0.6	30	0.44	2.2e-20	-5.34	9.37e-08	0.7	FALSE
IC	RT1-T18	gene expression	RT1-T18	0.75	29	0.44	1.7e-20	-5.67	1.41e-08	0.71	FALSE
IC	Tcf19	gene expression	Tcf19	0.37	2456	0.24	2.0e-10	6.07	1.27e-09	0.14	FALSE
IC	Znrd1as1	gene expression	Znrd1as1	0.22	80	0.13	3.0e-06	6.69	2.28e-11	0.15	FALSE
IC	Abcf1	isoform ratio	NM_001109883.2	0.31	1500	0.2	9.2e-09	5.25	1.53e-07	0.52	FALSE
IC	Abcf1	isoform ratio	XM_017601783.3	0.32	1500	0.2	8.4e-09	-5.28	1.28e-07	0.53	FALSE
IC	LOC120098832	isoform ratio	XR_010060950.1	0.16	3003	0.12	1.5e-05	-5.25	1.56e-07	0.02	FALSE
IC	RT1-O1l1	isoform ratio	XM_039099255.2	0.57	34	0.42	4.1e-19	5.57	2.53e-08	0.71	FALSE
IC	RT1-O1l1	isoform ratio	XM_039099257.2	0.57	21	0.42	7.9e-19	-5.67	1.40e-08	0.71	FALSE
IC	RT1-T24-4	isoform ratio	NM_001008826.3	0.1	21	0.06	2.3e-03	5.33	9.90e-08	0.29	FALSE
IC	Tmlhe	isoform ratio	XM_006255855.3	0.15	16	0.09	1.2e-04	-5.49	4.05e-08	0.51	FALSE
IC	Trim26	isoform ratio	NM_001011665.3	0.36	1	0.27	1.1e-11	-5.33	9.95e-08	0.01	FALSE
IC	Abcf1	intron excision ratio	chr20_2807464_2811704	0.3	1500	0.07	5.3e-04	5.72	1.06e-08	0.51	FALSE
IC	Abcf1	intron excision ratio	chr20_2807464_2812594	0.35	7	0.1	7.6e-05	-5.49	4.00e-08	0.57	FALSE
IC	Dhx16	intron excision ratio	chr20_2868393_2869501	0.14	1524	0.01	1.4e-01	7.29	3.16e-13	0.24	FALSE
IC	LOC134483846	intron excision ratio	chr20_2651165_2659663	0.65	9	0.33	2.5e-14	5.22	1.75e-07	0.64	FALSE
IC	RT1-T24-1	intron excision ratio	chr20_2696283_2696461	0.23	12	0.09	1.4e-04	5.33	1.01e-07	0.58	FALSE
IC	RT1-T24-3	intron excision ratio	chr20_2693808_2695740	0.32	4	0.12	1.3e-05	-5.44	5.20e-08	0.57	FALSE
IC	RT1-T24-3	intron excision ratio	chr20_2729559_2730008	0.13	1390	0.04	1.3e-02	-5.94	2.93e-09	0.3	FALSE
IC	RT1-T24-4	intron excision ratio	chr20_2693808_2695740	0.32	4	0.12	1.3e-05	-5.44	5.20e-08	0.58	FALSE
IC	RT1-T24-4	intron excision ratio	chr20_2696283_2696461	0.27	1	0.09	1.5e-04	5.26	1.43e-07	0.05	FALSE
IC	Tmlhe	intron excision ratio	chr20_107697_110960	0.22	2589	0.08	3.8e-04	-6.2	5.63e-10	0.15	TRUE
IC	Dhx16	mRNA stability	Dhx16	0.17	1	0.09	1.9e-04	5.41	6.25e-08	0.05	FALSE
IC	RT1-M6-2	mRNA stability	RT1-M6-2	0.25	10	0.13	5.6e-06	-6.49	8.44e-11	0.01	FALSE
IC	Tmlhe	mRNA stability	Tmlhe	0.4	2589	0.02	3.4e-02	-6.41	1.44e-10	0.26	FALSE
IL	RT1-CE15	alternative polyA	NM_001008838.2	0.22	2609	0.05	2.9e-02	-6.22	5.04e-10	0.26	FALSE
IL	RT1-CE4	alternative polyA	XM_039098961.2	0.25	3147	0.13	4.2e-04	5.22	1.80e-07	0.1	FALSE
IL	RT1-M1-2	alternative polyA	NM_001008849.2	0.19	1799	0.06	1.8e-02	-5.23	1.71e-07	0.08	FALSE
IL	RT1-M1-2	alternative polyA	XM_063279399.1	0.2	12	0.06	1.4e-02	5.45	5.17e-08	0.08	FALSE
IL	RT1-N2	alternative polyA	XM_039098781.2	0.53	1	0.24	1.5e-06	5.91	3.44e-09	0.23	FALSE
IL	RT1-N2	alternative polyA	XM_039098782.2	0.32	1195	0.17	8.5e-05	6.81	9.79e-12	0.62	FALSE
IL	RT1-N2	alternative polyA	XM_039098782.2	0.41	1195	0.2	1.2e-05	7.04	1.87e-12	0.65	FALSE
IL	RT1-O1l1	alternative polyA	XM_039099255.2	0.26	1156	0.13	5.4e-04	6.93	4.10e-12	0.56	FALSE
IL	RT1-S2	alternative polyA	NM_001008857.1	0.21	18	0.07	9.7e-03	5.22	1.79e-07	0.44	FALSE
IL	RT1-S2	alternative polyA	XM_063278970.1	0.2	18	0.07	9.6e-03	-5.3	1.15e-07	0.44	FALSE
IL	RT1-T24-4	alternative polyA	XM_063279390.1	0.27	1357	0.12	7.5e-04	-5.52	3.41e-08	0.39	FALSE
IL	RT1-T24-4	alternative polyA	XM_063279395.1	0.23	1357	0.11	1.7e-03	5.52	3.33e-08	0.36	FALSE
IL	Brpf3	alternative TSS	NM_001107615.1	0.18	19	0.09	3.7e-03	-5.89	3.97e-09	0.31	FALSE
IL	Cchcr1	alternative TSS	XM_063279375.1	0.17	2454	0.04	4.1e-02	5.53	3.16e-08	0.21	FALSE
IL	RT1-M1-4	alternative TSS	XM_063278995.1	0.38	1913	0.19	2.0e-05	-6.13	8.77e-10	0.03	FALSE
IL	Abcf1	gene expression	Abcf1	0.3	1500	0.13	4.9e-04	-5.96	2.55e-09	0.5	FALSE
IL	Cchcr1	gene expression	Cchcr1	0.76	28	0.47	4.9e-13	6.07	1.27e-09	0.67	FALSE
IL	Cdsn	gene expression	Cdsn	0.28	1	0.14	2.7e-04	5.87	4.30e-09	0.09	FALSE
IL	Clic2	gene expression	Clic2	0.25	2656	0.04	3.2e-02	-6.55	5.67e-11	0.24	FALSE
IL	Dhx16	gene expression	Dhx16	0.35	1524	0.17	7.2e-05	-5.24	1.64e-07	0.49	FALSE
IL	H2-Q7-ps1	gene expression	H2-Q7-ps1	0.61	17	0.42	2.1e-11	-5.86	4.68e-09	0.7	FALSE
IL	Ilrun	gene expression	Ilrun	0.84	30	0.4	1.4e-10	-5.95	2.76e-09	0.75	FALSE
IL	LOC134483846	gene expression	LOC134483846	0.89	14	0.55	1.2e-15	5.87	4.37e-09	0.64	FALSE
IL	Pacsin1	gene expression	Pacsin1	0.47	1	0.16	9.7e-05	-5.46	4.71e-08	0.06	FALSE
IL	RT1-M1-2	gene expression	RT1-M1-2	0.78	1799	0.45	2.3e-12	5.87	4.45e-09	0.02	FALSE
IL	RT1-M1-4	gene expression	RT1-M1-4	0.8	1913	0.38	3.2e-10	5.59	2.26e-08	0.01	FALSE
IL	RT1-M3-1	gene expression	RT1-M3-1	0.69	5	0.56	4.8e-16	-6.27	3.54e-10	0.58	FALSE
IL	RT1-O1l1	gene expression	RT1-O1l1	0.78	1156	0.46	1.1e-12	-6.66	2.67e-11	0.7	FALSE
IL	RT1-S2	gene expression	RT1-S2	0.74	1208	0.46	2.2e-12	5.97	2.32e-09	0.65	FALSE
IL	RT1-T18	gene expression	RT1-T18	0.64	1123	0.38	4.5e-10	-6.26	3.77e-10	0.69	FALSE
IL	Tcf19	gene expression	Tcf19	0.36	1	0.26	4.6e-07	5.39	7.20e-08	0.06	FALSE
IL	Abcf1	isoform ratio	NM_001109883.2	0.23	1500	0.14	3.8e-04	6.78	1.24e-11	0.43	FALSE
IL	Abcf1	isoform ratio	XM_017601783.3	0.22	1500	0.13	5.6e-04	-6.77	1.27e-11	0.41	FALSE
IL	Rps10	isoform ratio	NM_031109.2	0.72	39	0.45	3.5e-12	5.84	5.34e-09	0.31	FALSE
IL	Rps10	isoform ratio	XM_063279576.1	0.74	15	0.46	1.1e-12	-5.81	6.21e-09	0.38	FALSE
IL	RT1-CE4	isoform ratio	XM_039098961.2	0.46	291	0.19	2.0e-05	5.33	1.01e-07	0.48	FALSE
IL	RT1-N2	isoform ratio	XM_039098785.2	0.74	1195	0.39	1.6e-10	-5.44	5.47e-08	0.61	FALSE
IL	RT1-O1l1	isoform ratio	XM_039099255.2	0.42	1	0.26	6.9e-07	5.91	3.40e-09	0.41	FALSE
IL	RT1-S2	isoform ratio	NM_001008857.1	0.15	1	0.1	2.4e-03	5.55	2.87e-08	0.36	FALSE
IL	RT1-T24-4	isoform ratio	NM_001008826.3	0.31	1357	0.15	1.7e-04	6.91	4.80e-12	0.45	FALSE
IL	RT1-T24-4	isoform ratio	XM_063279395.1	0.25	71	0.13	6.4e-04	-5.83	5.44e-09	0.32	FALSE
IL	Trim26	isoform ratio	NM_001011665.3	0.42	133	0.27	2.6e-07	-5.21	1.88e-07	0.01	FALSE
IL	Abcf1	intron excision ratio	chr20_2807464_2812594	0.27	1500	0.12	9.7e-04	-6.7	2.04e-11	0.46	FALSE
IL	LOC134483846	intron excision ratio	chr20_2630996_2650951	0.41	1390	0.19	2.5e-05	-6.94	3.85e-12	0.52	FALSE
IL	LOC134483846	intron excision ratio	chr20_2639816_2650951	0.41	1390	0.19	2.5e-05	-6.94	3.85e-12	0.52	FALSE
IL	LOC134483846	intron excision ratio	chr20_2651165_2659663	0.76	19	0.44	4.8e-12	5.84	5.11e-09	0.63	FALSE
IL	Dhx16	mRNA stability	Dhx16	0.52	3	0.33	1.1e-08	5.5	3.77e-08	0.6	FALSE
IL	H2-M10.6l	mRNA stability	H2-M10.6l	0.73	1	0.44	6.9e-12	5.26	1.41e-07	0.24	FALSE
IL	LOC134483846	mRNA stability	LOC134483846	0.9	23	0.69	3.0e-22	5.49	4.08e-08	0.57	FALSE
IL	Tmlhe	mRNA stability	Tmlhe	0.19	32	0.08	4.9e-03	-5.37	8.02e-08	0.11	FALSE
LHb	RT1-CE4	alternative polyA	XM_039098960.2	0.25	17	0.03	6.8e-02	-5.65	1.65e-08	0.28	FALSE
LHb	RT1-CE5	alternative polyA	XM_039098673.2	0.48	3165	0.43	1.4e-11	5.52	3.40e-08	0.01	FALSE
LHb	RT1-N2	alternative polyA	XM_039098781.2	0.26	1	0.23	4.4e-06	5.54	3.08e-08	0.08	FALSE
LHb	RT1-N2	alternative polyA	XM_039098782.2	0.53	1195	0.31	5.4e-08	5.58	2.39e-08	0.58	FALSE
LHb	RT1-N2	alternative polyA	XM_039098782.2	0.41	12	0.32	2.8e-08	5.85	4.79e-09	0.64	FALSE
LHb	RT1-S2	alternative polyA	NM_001008857.1	0.39	8	0.25	1.1e-06	5.8	6.52e-09	0.65	FALSE
LHb	RT1-S2	alternative polyA	XM_063278970.1	0.38	10	0.24	1.8e-06	-5.8	6.50e-09	0.65	FALSE
LHb	RT1-CE12	alternative TSS	XM_063279098.1	0.15	2959	0.13	5.5e-04	-5.34	9.05e-08	0.07	FALSE
LHb	Cchcr1	gene expression	Cchcr1	0.64	1	0.44	7.6e-12	5.54	3.08e-08	0.29	FALSE
LHb	Clic2	gene expression	Clic2	0.51	2656	0.24	2.1e-06	-5.72	1.05e-08	0.06	FALSE
LHb	Ilrun	gene expression	Ilrun	0.79	1	0.27	5.2e-07	-5.61	2.03e-08	0.08	FALSE
LHb	LOC134483840	gene expression	LOC134483840	0.53	17	0.2	1.6e-05	6.48	9.05e-11	0.56	FALSE
LHb	Mdc1	gene expression	Mdc1	0.17	19	0.15	2.0e-04	-5.55	2.93e-08	0.38	FALSE
LHb	Mog	gene expression	Mog	0.25	3552	0.06	1.6e-02	6.56	5.51e-11	0.11	FALSE
LHb	RT1-CE4	gene expression	RT1-CE4	0.43	1	0.1	1.9e-03	5.66	1.48e-08	0.06	FALSE
LHb	RT1-M3-1	gene expression	RT1-M3-1	0.56	3466	0.29	1.1e-07	-6.34	2.25e-10	0.57	FALSE
LHb	RT1-O1l1	gene expression	RT1-O1l1	0.72	1156	0.45	4.7e-12	-5.84	5.28e-09	0.63	FALSE
LHb	Ubd	gene expression	Ubd	0.5	15	0.35	4.1e-09	5.84	5.26e-09	0.4	FALSE
LHb	Znrd1as1	gene expression	Znrd1as1	0.24	2915	0.03	7.9e-02	6.72	1.87e-11	0.15	FALSE
LHb	Dhx16	isoform ratio	XM_039098480.2	0.32	6	0.18	5.1e-05	-5.4	6.76e-08	0.56	FALSE
LHb	Rps10	isoform ratio	NM_031109.2	0.78	143	0.52	1.9e-14	5.66	1.48e-08	0.11	FALSE
LHb	Rps10	isoform ratio	XM_063279576.1	0.8	142	0.49	2.2e-13	-5.67	1.44e-08	0.11	FALSE
LHb	RT1-N2	isoform ratio	XM_039098785.2	0.56	1195	0.3	8.8e-08	-5.4	6.59e-08	0.59	FALSE
LHb	RT1-S2	isoform ratio	XM_063278970.1	0.44	12	0.28	2.0e-07	-5.68	1.37e-08	0.64	FALSE
LHb	RT1-T24-4	isoform ratio	NM_001008826.3	0.42	21	0.21	1.0e-05	6.57	5.18e-11	0.6	FALSE
LHb	RT1-T24-4	isoform ratio	XM_063279395.1	0.3	12	0.07	8.7e-03	-6.13	9.06e-10	0.34	FALSE
LHb	Trim26	isoform ratio	NM_001011665.3	0.45	2328	0.32	1.8e-08	-5.91	3.46e-09	0.02	FALSE
LHb	Abcf1	intron excision ratio	chr20_2807464_2812594	0.18	1500	0.04	4.2e-02	-5.84	5.08e-09	0.29	FALSE
LHb	LOC134483846	intron excision ratio	chr20_2651165_2659663	0.52	1390	0.22	6.3e-06	5.28	1.29e-07	0.51	FALSE
LHb	RT1-CE10	intron excision ratio	chr20_3302480_3382202	0.48	13	0.18	5.9e-05	-5.76	8.36e-09	0.63	FALSE
LHb	RT1-CE10	intron excision ratio	chr20_3382009_3382202	0.62	16	0.29	1.6e-07	5.63	1.85e-08	0.51	FALSE
LHb	RT1-CE11	intron excision ratio	chr20_3302480_3382202	0.48	14	0.18	5.7e-05	-5.76	8.31e-09	0.64	FALSE
LHb	RT1-CE11	intron excision ratio	chr20_3382009_3382202	0.62	17	0.29	1.5e-07	5.62	1.86e-08	0.51	FALSE
LHb	RT1-CE14	intron excision ratio	chr20_3302480_3382202	0.42	14	0.18	5.6e-05	-5.76	8.52e-09	0.6	FALSE
LHb	RT1-CE14	intron excision ratio	chr20_3382009_3382202	0.58	16	0.29	1.5e-07	5.64	1.66e-08	0.5	FALSE
LHb	Dhx16	mRNA stability	Dhx16	0.64	24	0.41	9.4e-11	5.55	2.81e-08	0.62	FALSE
LHb	Tmlhe	mRNA stability	Tmlhe	0.28	2589	0.06	1.6e-02	-5.45	5.12e-08	0.16	FALSE
Liver	Dhx16	alternative polyA	NM_212496.2	0.07	1524	0.03	2.2e-04	5.34	9.32e-08	0.56	FALSE
Liver	RT1-N2	alternative polyA	XM_039098782.2	0.34	15	0.34	3.7e-39	6.63	3.29e-11	0.72	FALSE
Liver	RT1-N2	alternative polyA	XM_039098782.2	0.36	15	0.35	7.9e-40	6.88	5.85e-12	0.72	FALSE
Liver	RT1-O1l1	alternative polyA	XM_039099255.2	0.28	4	0.19	1.6e-20	7.06	1.63e-12	0.72	FALSE
Liver	RT1-O1l1	alternative polyA	XM_039099257.2	0.37	21	0.34	3.3e-39	-6.23	4.60e-10	0.72	FALSE
Liver	RT1-S2	alternative polyA	NM_001008857.1	0.27	1208	0.24	1.2e-26	-6.59	4.50e-11	0.68	FALSE
Liver	Dhx16	alternative TSS	XM_039098484.2	0.06	1	0.06	6.2e-07	5.54	3.08e-08	0.29	FALSE
Liver	RT1-N2	alternative TSS	NM_001008854.2	0.31	16	0.3	1.6e-33	-5.4	6.70e-08	0.69	FALSE
Liver	Abcf1	gene expression	Abcf1	0.14	1500	0.12	1.0e-12	6.83	8.78e-12	0.64	FALSE
Liver	Dhx16	gene expression	Dhx16	0.16	1524	0.13	1.4e-14	-6.81	9.93e-12	0.64	FALSE
Liver	Gtf2h4	gene expression	Gtf2h4	0.3	224	0.29	4.9e-33	6.48	9.20e-11	0.65	FALSE
Liver	H2-Q7-ps1	gene expression	H2-Q7-ps1	0.52	12	0.6	3.1e-84	-5.78	7.40e-09	0.71	FALSE
Liver	Ilrun	gene expression	Ilrun	0.81	2400	0.32	5.3e-36	-6.42	1.32e-10	0.85	FALSE
Liver	LOC134483845	gene expression	LOC134483845	0.51	13	0.56	1.4e-75	-5.57	2.50e-08	0.64	FALSE
Liver	LOC134483848	gene expression	LOC134483848	0.04	1489	0.03	2.8e-04	-5.56	2.69e-08	0.52	FALSE
Liver	LOC134483850	gene expression	LOC134483850	0.11	28	0.06	1.1e-07	5.27	1.36e-07	0.55	FALSE
Liver	Olfr94-ps1	gene expression	Olfr94-ps1	0.83	63	0.45	2.0e-55	-5.28	1.28e-07	0	FALSE
Liver	RT1-M2	gene expression	RT1-M2	0.43	11	0.22	3.0e-24	-6.33	2.47e-10	0.57	FALSE
Liver	Taf11	gene expression	Taf11	0.06	1	0.01	5.0e-02	5.87	4.49e-09	0.03	FALSE
Liver	Tmlhe	gene expression	Tmlhe	0.18	2589	0.11	5.9e-12	-6.09	1.12e-09	0.54	FALSE
Liver	Abcf1	isoform ratio	NM_001109883.2	0.05	1500	0.04	3.2e-05	6.76	1.42e-11	0.59	FALSE
Liver	Abcf1	isoform ratio	XM_017601783.3	0.06	1500	0.04	1.1e-05	-6.72	1.78e-11	0.59	FALSE
Liver	Prr3	isoform ratio	XM_006255943.4	0.03	1496	0.02	1.0e-03	6.3	2.90e-10	0.53	FALSE
Liver	RT1-CE16	isoform ratio	NM_001008839.2	0.18	25	0.29	6.6e-33	5.21	1.85e-07	0.02	FALSE
Liver	RT1-N2	isoform ratio	XM_017601671.3	0.45	17	0.34	6.4e-39	5.41	6.22e-08	0.69	FALSE
Liver	RT1-N2	isoform ratio	XM_039098783.2	0.41	19	0.4	1.4e-47	6.46	1.01e-10	0.71	FALSE
Liver	RT1-N2	isoform ratio	XM_039098785.2	0.63	15	0.51	5.8e-65	-6.11	1.01e-09	0.72	FALSE
Liver	RT1-O1l1	isoform ratio	XM_039099255.2	0.29	7	0.29	2.1e-32	6.8	1.02e-11	0.72	FALSE
Liver	RT1-O1l1	isoform ratio	XM_039099257.2	0.42	13	0.39	3.0e-46	-6.46	1.05e-10	0.72	FALSE
Liver	Snrpc	isoform ratio	NM_001271040.1	0.28	38	0.11	4.0e-12	-6.11	1.01e-09	0.86	FALSE
Liver	Snrpc	isoform ratio	XM_039098816.2	0.37	113	0.22	9.3e-24	5.35	8.96e-08	0.86	FALSE
Liver	Tmlhe	isoform ratio	XM_006255855.3	0.4	18	0.27	9.9e-30	-5.85	4.81e-09	0.54	FALSE
Liver	LOC102553505	intron excision ratio	chr20_2954360_2955331	0.05	1511	0.02	1.2e-03	5.47	4.56e-08	0.32	FALSE
Liver	LOC102553505	intron excision ratio	chr20_2958693_2958849	0.22	1511	0.03	1.2e-04	-6.03	1.63e-09	0.54	FALSE
Liver	LOC134483846	intron excision ratio	chr20_2687789_2696130	0.31	29	0.06	6.1e-07	-5.51	3.62e-08	0.63	FALSE
Liver	LOC134483846	intron excision ratio	chr20_2709656_2712862	0.53	1	0.04	2.7e-05	5.91	3.40e-09	0.67	FALSE
Liver	LOC134483846	intron excision ratio	chr20_2709656_2735001	0.54	1	0.04	2.2e-05	5.91	3.40e-09	0.69	FALSE
Liver	LOC134483846	intron excision ratio	chr20_2727582_2729544	0.46	4	0.09	2.7e-10	-6.7	2.10e-11	0.64	FALSE
Liver	RT1-CE10	intron excision ratio	chr20_3362457_3384434	0.58	447	0.19	1.4e-20	-6.65	2.88e-11	0	FALSE
Liver	RT1-CE10	intron excision ratio	chr20_3384252_3384434	0.56	426	0.19	5.1e-21	6.7	2.10e-11	0	FALSE
Liver	RT1-CE11	intron excision ratio	chr20_3362457_3384434	0.58	435	0.19	1.4e-20	-6.7	2.05e-11	0	FALSE
Liver	RT1-CE11	intron excision ratio	chr20_3384252_3384434	0.56	388	0.19	4.9e-21	6.84	7.75e-12	0	FALSE
Liver	RT1-M3-1	intron excision ratio	chr20_1329478_1329640	0.04	3466	0.01	7.0e-02	6.01	1.89e-09	0.11	FALSE
Liver	RT1-S3	intron excision ratio	chr20_2677422_2677524	0.23	1303	0.09	6.1e-10	5.84	5.09e-09	0.44	FALSE
Liver	RT1-S3	intron excision ratio	chr20_2677658_2677835	0.61	1303	0.07	4.0e-08	5.49	4.09e-08	0.44	FALSE
Liver	RT1-S3	intron excision ratio	chr20_2746380_2746567	0.71	45	0.07	3.2e-08	-5.5	3.82e-08	0.1	FALSE
Liver	RT1-T24-4	intron excision ratio	chr20_2677422_2677524	0.22	1357	0.09	6.1e-10	5.84	5.14e-09	0.44	FALSE
Liver	RT1-T24-4	intron excision ratio	chr20_2677658_2677835	0.61	1357	0.07	4.3e-08	5.51	3.61e-08	0.44	FALSE
Liver	RT1-T24-4	intron excision ratio	chr20_2696283_2696461	0.76	21	0.18	3.2e-19	5.91	3.35e-09	0.16	FALSE
Liver	RT1-T24-4	intron excision ratio	chr20_2746380_2746567	0.71	45	0.07	3.8e-08	-5.5	3.81e-08	0.1	FALSE
Liver	Snrpc	intron excision ratio	chr20_5897866_5898164	0.39	137	0.21	2.5e-23	-5.8	6.70e-09	0.85	FALSE
Liver	Snrpc	intron excision ratio	chr20_5897976_5898164	0.52	188	0.36	3.8e-42	5.56	2.63e-08	0.85	FALSE
Liver	Znrd1as1	intron excision ratio	chr20_1592067_1595158	0.16	2915	0.05	1.7e-06	6.64	3.06e-11	0.03	FALSE
Liver	Atat1	mRNA stability	Atat1	0.07	25	0.05	7.8e-06	-5.79	7.13e-09	0.4	FALSE
Liver	Dhx16	mRNA stability	Dhx16	0.3	29	0.27	7.1e-30	5.39	6.92e-08	0.63	FALSE
Liver	Tmlhe	mRNA stability	Tmlhe	0.4	25	0.36	3.9e-42	-5.74	9.48e-09	0	FALSE
NAcc	Dhx16	alternative polyA	XM_039098480.2	0.08	4	0.11	2.5e-16	-5.67	1.46e-08	0.64	FALSE
NAcc	Dhx16	alternative polyA	XM_039098480.2	0.09	10	0.13	2.2e-19	-5.76	8.54e-09	0.65	FALSE
NAcc	Dhx16	alternative polyA	XM_039098481.2	0.08	9	0.08	1.6e-12	6.9	5.21e-12	0.62	FALSE
NAcc	RT1-N2	alternative polyA	XM_039098782.2	0.34	22	0.22	1.5e-32	5.78	7.38e-09	0.74	FALSE
NAcc	RT1-N2	alternative polyA	XM_039098782.2	0.45	24	0.28	8.7e-42	5.87	4.31e-09	0.79	FALSE
NAcc	RT1-O1l1	alternative polyA	XM_039099255.2	0.29	15	0.43	8.8e-71	5.21	1.84e-07	0.73	FALSE
NAcc	RT1-O1l1	alternative polyA	XM_039099257.2	0.37	102	0.52	2.7e-92	-5.81	6.38e-09	0.73	FALSE
NAcc	RT1-S2	alternative polyA	NM_001008857.1	0.08	1	0.07	5.7e-11	5.41	6.32e-08	0.2	FALSE
NAcc	RT1-S2	alternative polyA	XM_063278970.1	0.08	1	0.07	2.0e-10	-5.41	6.32e-08	0.2	FALSE
NAcc	Zfp57	alternative polyA	NM_213565.4	0.05	1	0.02	3.0e-04	5.61	2.05e-08	0.02	FALSE
NAcc	Prr3	alternative TSS	XM_063279198.1	0.04	1496	0.03	8.7e-06	-6.92	4.50e-12	0.62	FALSE
NAcc	Prr3	alternative TSS	XM_063279199.1	0.03	1496	0.02	4.4e-04	6.57	5.19e-11	0.6	FALSE
NAcc	Prr3	alternative TSS	XM_063279198.1	0.04	1496	0.03	1.7e-05	-6.95	3.53e-12	0.63	FALSE
NAcc	Prr3	alternative TSS	XM_063279199.1	0.04	1496	0.03	9.5e-06	6.93	4.10e-12	0.62	FALSE
NAcc	RT1-M1-2	alternative TSS	NM_001008849.2	0.02	1799	0	6.1e-02	6.18	6.26e-10	0.04	FALSE
NAcc	RT1-M6-2	alternative TSS	XM_017601696.2	0.03	3124	0.04	4.2e-06	6.82	9.32e-12	0.12	FALSE
NAcc	RT1-M6-2	alternative TSS	XM_017601696.2	0.04	3124	0.04	6.1e-07	6.78	1.24e-11	0.05	FALSE
NAcc	RT1-N2	alternative TSS	NM_001008854.2	0.15	66	0.11	4.7e-16	-5.89	3.90e-09	0.62	FALSE
NAcc	RT1-N2	alternative TSS	XM_039098781.2	0.11	1195	0.1	1.9e-15	6.01	1.84e-09	0.66	FALSE
NAcc	RT1-T18	alternative TSS	XM_063279363.1	0.11	1	0.14	6.3e-21	-5.75	8.96e-09	0.63	FALSE
NAcc	RT1-T18	alternative TSS	XM_063279365.1	0.11	1	0.15	7.5e-22	-5.75	8.96e-09	0.63	FALSE
NAcc	Cchcr1	gene expression	Cchcr1	0.55	53	0.61	2.1e-119	5.92	3.22e-09	0.69	FALSE
NAcc	Clic2	gene expression	Clic2	0.07	2656	0.06	4.2e-09	-6.29	3.22e-10	0.04	FALSE
NAcc	Ddr1	gene expression	Ddr1	0.13	13	0.16	1.5e-23	6.23	4.55e-10	0.61	FALSE
NAcc	Dhx16	gene expression	Dhx16	0.08	1524	0.06	4.8e-10	-6.83	8.21e-12	0.62	FALSE
NAcc	Flot1	gene expression	Flot1	0.05	1513	0.03	4.0e-05	-5.26	1.48e-07	0.44	FALSE
NAcc	Gtf2h4	gene expression	Gtf2h4	0.62	1	0.11	1.3e-16	5.8	6.47e-09	0.66	FALSE
NAcc	H2-Q7-ps1	gene expression	H2-Q7-ps1	0.29	23	0.37	1.3e-58	-5.74	9.62e-09	0.72	FALSE
NAcc	Ilrun	gene expression	Ilrun	0.85	161	0.74	2.0e-170	-6.14	8.35e-10	0.9	FALSE
NAcc	LOC120098827	gene expression	LOC120098827	0.24	40	0.24	1.4e-35	5.33	9.86e-08	0.46	FALSE
NAcc	LOC134483840	gene expression	LOC134483840	0.23	3533	0.2	4.5e-29	6.67	2.50e-11	0.56	FALSE
NAcc	LOC134483844	gene expression	LOC134483844	0.46	1	0.23	2.1e-34	-5.3	1.17e-07	0.3	FALSE
NAcc	LOC134483846	gene expression	LOC134483846	0.67	86	0.78	1.0e-189	5.93	3.04e-09	0.69	FALSE
NAcc	Mog	gene expression	Mog	0.35	32	0.17	1.5e-25	5.41	6.31e-08	0.01	FALSE
NAcc	Pacsin1	gene expression	Pacsin1	0.09	1	0.06	2.0e-09	-5.97	2.31e-09	0.72	FALSE
NAcc	Rps10	gene expression	Rps10	0.28	1	0.28	2.1e-42	-5.34	9.04e-08	0.07	FALSE
NAcc	RT1-CE13	gene expression	RT1-CE13	0.06	2740	0.05	7.0e-08	-5.42	5.84e-08	0.15	FALSE
NAcc	RT1-M3-1	gene expression	RT1-M3-1	0.41	31	0.48	2.0e-83	-6.68	2.32e-11	0.57	FALSE
NAcc	RT1-M6-2	gene expression	RT1-M6-2	0.15	23	0.18	3.0e-27	6.03	1.64e-09	0	FALSE
NAcc	RT1-O1l1	gene expression	RT1-O1l1	0.64	66	0.71	1.2e-153	-5.92	3.21e-09	0.72	FALSE
NAcc	RT1-S2	gene expression	RT1-S2	0.52	95	0.66	6.9e-135	5.31	1.08e-07	0.72	FALSE
NAcc	RT1-S3	gene expression	RT1-S3	0.3	114	0.27	1.7e-40	5.22	1.79e-07	0.69	FALSE
NAcc	RT1-T18	gene expression	RT1-T18	0.46	77	0.65	9.9e-133	-6	1.94e-09	0.74	FALSE
NAcc	RT1-T24-2	gene expression	RT1-T24-2	0.04	1416	0.03	7.6e-05	6.9	5.23e-12	0.58	FALSE
NAcc	RT1-T24-4	gene expression	RT1-T24-4	0.05	1357	0.04	9.0e-07	5.89	3.91e-09	0.63	FALSE
NAcc	Spdef	gene expression	Spdef	0.15	46	0.09	6.2e-14	-5.62	1.88e-08	0.6	FALSE
NAcc	Tcf19	gene expression	Tcf19	0.06	2456	0.04	8.7e-07	5.68	1.33e-08	0.55	FALSE
NAcc	Zfp57	gene expression	Zfp57	0.07	1	0.04	1.7e-06	5.61	2.05e-08	0.02	FALSE
NAcc	Znrd1as1	gene expression	Znrd1as1	0.31	23	0.29	6.5e-45	5.77	7.74e-09	0.01	FALSE
NAcc	Dhx16	isoform ratio	NM_212496.2	0.06	1524	0.05	2.0e-08	6.81	9.90e-12	0.56	FALSE
NAcc	Dhx16	isoform ratio	XM_039098480.2	0.08	1524	0.1	4.9e-15	-6.15	7.70e-10	0.66	FALSE
NAcc	Prr3	isoform ratio	NM_212544.2	0.03	1496	0.02	3.0e-04	6.81	1.00e-11	0.52	FALSE
NAcc	RT1-N2	isoform ratio	XM_039098785.2	0.37	28	0.4	2.4e-65	-5.56	2.74e-08	0.7	FALSE
NAcc	RT1-O1l1	isoform ratio	XM_039099255.2	0.34	55	0.49	5.8e-85	5.92	3.29e-09	0.72	FALSE
NAcc	RT1-O1l1	isoform ratio	XM_039099257.2	0.34	100	0.5	1.3e-86	-5.89	3.88e-09	0.73	FALSE
NAcc	RT1-S2	isoform ratio	NM_001008857.1	0.16	1208	0.15	2.2e-22	6.26	3.82e-10	0.66	FALSE
NAcc	RT1-S2	isoform ratio	XM_063278970.1	0.15	1208	0.14	1.9e-20	-6.22	4.99e-10	0.64	FALSE
NAcc	RT1-T24-4	isoform ratio	NM_001008826.3	0.35	90	0.15	1.5e-22	7.36	1.83e-13	0.41	FALSE
NAcc	Trim26	isoform ratio	XM_039098635.2	0.03	2328	0.02	9.8e-04	5.21	1.92e-07	0.34	FALSE
NAcc	Abcf1	intron excision ratio	chr20_2807464_2811704	0.08	1500	0.09	1.4e-13	6.27	3.52e-10	0.64	FALSE
NAcc	Clic2	intron excision ratio	chr20_143441_143993	0.05	4	0.01	7.6e-03	6.44	1.20e-10	0.68	FALSE
NAcc	Ilrun	intron excision ratio	chr20_5814339_5827328	0.04	1	0.01	2.8e-03	-6.04	1.57e-09	0.16	FALSE
NAcc	LOC108349039	intron excision ratio	chr20_6210978_6236208	0.12	1	0.01	2.5e-02	-6.23	4.57e-10	0.12	FALSE
NAcc	LOC134483846	intron excision ratio	chr20_2651165_2659663	0.61	58	0.6	5.7e-114	5.6	2.14e-08	0.7	FALSE
NAcc	LOC134483846	intron excision ratio	chr20_2696253_2699116	0.3	34	0.44	2.3e-74	-5.79	7.10e-09	0.69	FALSE
NAcc	Prr3	intron excision ratio	chr20_2798224_2798492	0.02	1496	0.02	1.5e-03	-6.58	4.64e-11	0.49	FALSE
NAcc	RT1-CE10	intron excision ratio	chr20_3382009_3382202	0.16	3056	0.1	4.0e-15	5.31	1.07e-07	0.74	FALSE
NAcc	RT1-CE11	intron excision ratio	chr20_3382009_3382202	0.16	3055	0.1	4.1e-15	5.31	1.07e-07	0.74	FALSE
NAcc	RT1-CE12	intron excision ratio	chr20_3382009_3382202	0.15	2959	0.1	3.5e-15	5.31	1.10e-07	0.72	FALSE
NAcc	RT1-CE14	intron excision ratio	chr20_3382009_3382202	0.13	2648	0.1	2.8e-15	5.27	1.39e-07	0.7	FALSE
NAcc	RT1-M3-1	intron excision ratio	chr20_1332603_1332806	0.04	1	0.03	3.4e-05	6.45	1.12e-10	0.37	FALSE
NAcc	RT1-M3-1	intron excision ratio	chr20_1332983_1333267	0.02	1	0.02	2.1e-04	-6.52	7.25e-11	0.08	FALSE
NAcc	RT1-M3-1	intron excision ratio	chr20_1333075_1333267	0.05	3466	0.05	5.8e-08	-6.69	2.26e-11	0.57	FALSE
NAcc	RT1-T24-3	intron excision ratio	chr20_2693808_2695740	0.06	11	0.04	5.4e-07	-5.55	2.84e-08	0.6	FALSE
NAcc	RT1-T24-4	intron excision ratio	chr20_2693808_2695740	0.06	11	0.04	5.3e-07	-5.56	2.70e-08	0.6	FALSE
NAcc	RT1-T24-4	intron excision ratio	chr20_2696490_2696699	0.05	1	0.06	7.6e-09	5.28	1.29e-07	0.1	FALSE
NAcc	RT1-T24-4	intron excision ratio	chr20_2746170_2746348	0.04	1357	0.02	1.1e-04	7.04	1.92e-12	0.64	FALSE
NAcc	RT1-T24-4	intron excision ratio	chr20_2746380_2746567	0.07	1357	0.06	1.4e-09	6.18	6.43e-10	0.67	FALSE
NAcc	Tmlhe	intron excision ratio	chr20_107697_110960	0.1	46	0.06	1.7e-09	-5.82	6.03e-09	0.48	FALSE
NAcc	Tmlhe	intron excision ratio	chr20_113474_122979	0.09	2589	0.07	1.3e-10	-5.75	8.91e-09	0.53	FALSE
NAcc	Tmlhe	intron excision ratio	chr20_143441_143993	0.05	3	0.01	7.4e-03	6.66	2.83e-11	0.65	FALSE
NAcc	Znrd1as1	intron excision ratio	chr20_1594708_1595158	0.03	1	0.01	3.7e-03	5.51	3.54e-08	0.02	FALSE
NAcc	Znrd1as1	intron excision ratio	chr20_1595233_1599935	0.03	2	0.01	8.0e-03	6.18	6.46e-10	0.03	FALSE
NAcc	Znrd1as1	intron excision ratio	chr20_1599314_1599608	0.03	1	0.02	1.1e-04	-5.51	3.54e-08	0.02	FALSE
NAcc	Dhx16	mRNA stability	Dhx16	0.19	6	0.26	3.9e-39	5.6	2.20e-08	0.6	FALSE
NAcc	LOC134483846	mRNA stability	LOC134483846	0.65	50	0.66	2.6e-134	5.23	1.67e-07	0.68	FALSE
NAcc	Nudt3	mRNA stability	Nudt3	0.07	2415	0.03	6.5e-05	6.72	1.85e-11	0.86	FALSE
NAcc	Tmlhe	mRNA stability	Tmlhe	0.17	2589	0.17	1.3e-24	-6.39	1.71e-10	0.53	FALSE
NAcc	Trim26	mRNA stability	Trim26	0.1	1	0.03	1.0e-04	6.38	1.73e-10	0.56	FALSE
NAcc	Znrd1as1	mRNA stability	Znrd1as1	0.1	2915	0.07	3.3e-10	5.48	4.31e-08	0.01	FALSE
OFC	Dhx16	alternative polyA	NM_212496.2	0.2	6	0.14	3.3e-04	5.73	1.03e-08	0.5	FALSE
OFC	Dhx16	alternative polyA	XM_039098480.2	0.29	1	0.25	1.4e-06	-5.39	7.20e-08	0.06	FALSE
OFC	Dhx16	alternative polyA	XM_039098480.2	0.32	1	0.26	6.3e-07	-5.39	7.20e-08	0.06	FALSE
OFC	RT1-N2	alternative polyA	XM_039098782.2	0.43	1195	0.32	2.6e-08	6.95	3.56e-12	0.68	FALSE
OFC	RT1-N2	alternative polyA	XM_039098782.2	0.46	1	0.36	2.5e-09	5.64	1.68e-08	0.38	FALSE
OFC	RT1-O1l1	alternative polyA	XM_039099255.2	0.42	1	0.4	1.6e-10	5.39	7.20e-08	0.15	FALSE
OFC	RT1-T24-3	alternative polyA	XM_063279403.1	0.38	3	0.3	8.0e-08	-5.26	1.44e-07	0.26	FALSE
OFC	Abcf1	gene expression	Abcf1	0.66	1	0.47	1.4e-12	-5.41	6.32e-08	0.17	FALSE
OFC	Cchcr1	gene expression	Cchcr1	0.88	33	0.51	3.5e-14	5.78	7.69e-09	0.66	FALSE
OFC	Clic2	gene expression	Clic2	0.21	2656	0.13	4.8e-04	-5.51	3.54e-08	0.07	FALSE
OFC	H2-Q7-ps1	gene expression	H2-Q7-ps1	0.61	31	0.41	8.2e-11	-5.62	1.88e-08	0.67	FALSE
OFC	Ilrun	gene expression	Ilrun	0.92	205	0.52	2.5e-14	-5.65	1.63e-08	0.87	FALSE
OFC	LOC134483840	gene expression	LOC134483840	0.48	22	0.29	1.4e-07	6.5	7.88e-11	0.57	FALSE
OFC	LOC134483844	gene expression	LOC134483844	0.69	1	0.23	4.4e-06	-5.65	1.59e-08	0.21	FALSE
OFC	LOC134483846	gene expression	LOC134483846	0.82	21	0.52	2.0e-14	6.21	5.45e-10	0.62	FALSE
OFC	RT1-M3-1	gene expression	RT1-M3-1	0.57	26	0.39	2.5e-10	-6.33	2.46e-10	0.58	FALSE
OFC	RT1-O1l1	gene expression	RT1-O1l1	0.73	20	0.46	1.6e-12	-5.22	1.77e-07	0.63	FALSE
OFC	RT1-T18	gene expression	RT1-T18	0.7	27	0.41	9.9e-11	-5.84	5.16e-09	0.7	FALSE
OFC	Tcf19	gene expression	Tcf19	0.26	1	0.16	1.5e-04	5.41	6.32e-08	0.05	FALSE
OFC	Dhx16	isoform ratio	NM_212496.2	0.28	1	0.27	4.8e-07	5.92	3.13e-09	0.23	FALSE
OFC	Dhx16	isoform ratio	XM_039098480.2	0.29	1	0.27	5.0e-07	-5.41	6.32e-08	0.06	FALSE
OFC	Rps10	isoform ratio	NM_031109.2	0.75	491	0.44	8.8e-12	5.96	2.47e-09	0.1	FALSE
OFC	RT1-CE13	isoform ratio	XM_063279407.1	0.14	2740	0.1	3.0e-03	5.91	3.39e-09	0.22	FALSE
OFC	RT1-M3-1	isoform ratio	XM_063278959.1	0.23	3466	0.19	2.4e-05	-5.28	1.27e-07	0.04	FALSE
OFC	RT1-N2	isoform ratio	XM_039098785.2	0.52	10	0.4	1.9e-10	-5.89	3.85e-09	0.67	FALSE
OFC	RT1-O1l1	isoform ratio	XM_039099255.2	0.43	1156	0.35	3.6e-09	6.76	1.43e-11	0.69	FALSE
OFC	RT1-T24-4	isoform ratio	NM_001008826.3	0.49	1357	0.34	5.2e-09	7.02	2.20e-12	0.64	FALSE
OFC	RT1-T24-4	isoform ratio	XM_063279395.1	0.32	1	0.2	1.5e-05	-5.59	2.26e-08	0.06	FALSE
OFC	Ilrun	intron excision ratio	chr20_5814339_5827328	0.58	10	0.2	1.5e-05	5.48	4.21e-08	0.46	FALSE
OFC	LOC134483846	intron excision ratio	chr20_2630996_2650951	0.38	22	0.17	7.2e-05	-6.81	9.78e-12	0.54	FALSE
OFC	LOC134483846	intron excision ratio	chr20_2639816_2650951	0.38	22	0.17	8.7e-05	-6.81	9.76e-12	0.54	FALSE
OFC	LOC134483846	intron excision ratio	chr20_2651165_2659663	0.88	12	0.52	2.3e-14	5.94	2.80e-09	0.54	FALSE
OFC	RT1-CE2	intron excision ratio	chr20_3481171_3481299	0.43	3086	0.2	2.0e-05	-5.34	9.31e-08	0.45	FALSE
OFC	RT1-CE4	intron excision ratio	chr20_3481171_3481299	0.43	3147	0.2	1.8e-05	-5.4	6.83e-08	0.4	FALSE
OFC	RT1-CE5	intron excision ratio	chr20_3481171_3481299	0.43	3165	0.2	1.8e-05	-5.42	5.95e-08	0.38	FALSE
OFC	RT1-O1	intron excision ratio	chr20_2696283_2746348	0.15	1	0.03	7.1e-02	-5.21	1.87e-07	0.05	FALSE
OFC	RT1-T24-4	intron excision ratio	chr20_2696283_2746348	0.15	1	0.03	7.1e-02	-5.25	1.55e-07	0.05	FALSE
OFC	Tmlhe	mRNA stability	Tmlhe	0.35	2589	0.17	6.1e-05	-6.24	4.26e-10	0.13	FALSE
PL	Dhx16	alternative polyA	XM_039098480.2	0.11	1524	0.15	7.6e-16	-6.28	3.33e-10	0.62	FALSE
PL	Dhx16	alternative polyA	XM_039098480.2	0.12	1524	0.16	8.2e-17	-6.35	2.22e-10	0.62	FALSE
PL	Dhx16	alternative polyA	XM_039098481.2	0.08	9	0.05	3.7e-06	6.07	1.29e-09	0.64	FALSE
PL	RT1-N2	alternative polyA	XM_039098782.2	0.59	39	0.33	6.2e-37	5.72	1.05e-08	0.77	FALSE
PL	RT1-N2	alternative polyA	XM_039098782.2	0.61	37	0.31	6.9e-35	6.26	3.85e-10	0.8	FALSE
PL	RT1-O1l1	alternative polyA	XM_039099255.2	0.35	39	0.46	2.2e-55	5.79	7.02e-09	0.72	FALSE
PL	RT1-O1l1	alternative polyA	XM_039099257.2	0.61	49	0.62	1.8e-86	-5.69	1.29e-08	0.72	FALSE
PL	RT1-S2	alternative polyA	NM_001008857.1	0.1	27	0.05	7.3e-06	6.59	4.49e-11	0.63	FALSE
PL	RT1-S2	alternative polyA	XM_063278970.1	0.36	27	0.06	2.5e-07	-6.41	1.49e-10	0.65	FALSE
PL	Cchcr1	alternative TSS	NM_001002822.2	0.04	1	0.03	8.7e-04	5.54	3.08e-08	0.04	FALSE
PL	Cchcr1	alternative TSS	NM_001002822.2	0.04	1	0.03	9.4e-04	5.54	3.08e-08	0.04	FALSE
PL	Dhx16	alternative TSS	NM_212496.2	0.03	1	0.03	6.6e-04	-5.46	4.71e-08	0.03	FALSE
PL	Dhx16	alternative TSS	XM_039098481.2	0.03	1	0.02	6.3e-03	5.46	4.71e-08	0.03	FALSE
PL	Rpp21	alternative TSS	XM_063279377.1	0.02	1559	0.01	9.8e-03	6.3	2.92e-10	0.34	FALSE
PL	Rpp21	alternative TSS	XM_063279380.1	0.02	1	0.02	6.7e-03	-5.61	2.05e-08	0.04	FALSE
PL	RT1-T18	alternative TSS	XM_063279363.1	0.12	14	0.16	1.8e-17	-5.39	7.04e-08	0.71	FALSE
PL	RT1-T18	alternative TSS	XM_063279365.1	0.14	1	0.2	2.3e-21	-5.79	7.05e-09	0.68	FALSE
PL	Slc26a8	alternative TSS	NM_001107614.3	0.06	66	0.03	4.3e-04	5.51	3.56e-08	0.03	FALSE
PL	Znrd1as1	alternative TSS	XM_006255877.5	0.03	2915	0.02	1.5e-03	-6.7	2.15e-11	0.42	FALSE
PL	Abcf1	gene expression	Abcf1	0.33	9	0.41	6.9e-48	-5.54	3.06e-08	0.68	FALSE
PL	Cchcr1	gene expression	Cchcr1	0.66	99	0.75	1.8e-122	6.13	9.03e-10	0.7	FALSE
PL	Cdsn	gene expression	Cdsn	0.19	53	0.17	3.1e-18	5.62	1.93e-08	0.66	FALSE
PL	Clic2	gene expression	Clic2	0.18	2656	0.18	1.0e-19	-6.13	8.64e-10	0	FALSE
PL	Ddr1	gene expression	Ddr1	0.1	1	0.13	5.8e-14	5.64	1.68e-08	0.44	FALSE
PL	Dhx16	gene expression	Dhx16	0.09	1524	0.09	6.3e-10	-6.84	7.81e-12	0.63	FALSE
PL	G4	gene expression	G4	0.15	16	0.11	2.4e-12	6.2	5.48e-10	0.09	FALSE
PL	Gtf2h4	gene expression	Gtf2h4	0.11	1495	0.13	1.0e-13	6.83	8.77e-12	0.66	FALSE
PL	H2-Q7-ps1	gene expression	H2-Q7-ps1	0.48	36	0.57	9.6e-75	-5.71	1.10e-08	0.71	FALSE
PL	LOC120098827	gene expression	LOC120098827	0.39	2288	0.27	6.3e-30	5.74	9.55e-09	0.47	FALSE
PL	LOC134483840	gene expression	LOC134483840	0.36	39	0.34	1.8e-38	6.56	5.46e-11	0.57	FALSE
PL	LOC134483841	gene expression	LOC134483841	0.38	13	0.45	1.4e-53	5.26	1.46e-07	0.05	FALSE
PL	LOC134483844	gene expression	LOC134483844	0.72	7	0.48	5.9e-59	-6.16	7.18e-10	0.83	FALSE
PL	Rps10	gene expression	Rps10	0.51	15	0.41	5.4e-48	-5.34	9.14e-08	0.08	FALSE
PL	RT1-M3-1	gene expression	RT1-M3-1	0.66	3466	0.63	9.9e-88	-6.09	1.13e-09	0.58	FALSE
PL	RT1-N2	gene expression	RT1-N2	0.57	58	0.69	1.4e-104	5.52	3.35e-08	0.71	FALSE
PL	RT1-O1l1	gene expression	RT1-O1l1	0.65	48	0.75	8.7e-123	-5.72	1.06e-08	0.71	FALSE
PL	RT1-S2	gene expression	RT1-S2	0.57	38	0.71	1.9e-109	5.64	1.65e-08	0.71	FALSE
PL	RT1-T18	gene expression	RT1-T18	0.49	43	0.69	1.6e-105	-5.86	4.53e-09	0.72	FALSE
PL	RT1-T24-2	gene expression	RT1-T24-2	0.77	1416	0.1	5.5e-11	7.74	9.69e-15	0.65	TRUE
PL	Srpk1	gene expression	Srpk1	0.09	20	0.1	1.4e-10	-5.34	9.32e-08	0	FALSE
PL	Tcf19	gene expression	Tcf19	0.34	106	0.32	1.3e-35	5.65	1.59e-08	0.63	FALSE
PL	Trim15	gene expression	Trim15	0.08	377	0.07	1.4e-08	6.29	3.13e-10	0	FALSE
PL	Znrd1as1	gene expression	Znrd1as1	0.26	2915	0.21	8.7e-23	5.74	9.35e-09	0.01	FALSE
PL	Abcf1	isoform ratio	NM_001109883.2	0.21	10	0.2	7.1e-22	5.4	6.66e-08	0.67	FALSE
PL	Abcf1	isoform ratio	XM_017601783.3	0.21	10	0.21	5.4e-22	-5.37	8.06e-08	0.67	FALSE
PL	Ddr1	isoform ratio	XM_063278984.1	0.04	21	0.03	2.8e-04	6.49	8.48e-11	0.49	FALSE
PL	Dhx16	isoform ratio	NM_212496.2	0.04	1524	0.03	2.4e-04	6.57	5.16e-11	0.56	FALSE
PL	Dhx16	isoform ratio	XM_039098480.2	0.15	1524	0.18	1.2e-19	-6.04	1.58e-09	0.62	FALSE
PL	LOC108349039	isoform ratio	XR_010061002.1	0.09	1	0.01	9.8e-03	6.04	1.57e-09	0.06	FALSE
PL	Rpp21	isoform ratio	NM_001002831.1	0.76	204	0.11	5.7e-12	-6.31	2.77e-10	0.12	FALSE
PL	RT1-N2	isoform ratio	XM_017601671.3	0.25	1195	0.22	5.1e-24	5.75	8.86e-09	0.7	FALSE
PL	RT1-N2	isoform ratio	XM_039098785.2	0.37	24	0.54	1.5e-70	-5.8	6.78e-09	0.72	FALSE
PL	RT1-O1l1	isoform ratio	XM_039099255.2	0.45	34	0.58	8.1e-78	5.84	5.34e-09	0.72	FALSE
PL	RT1-O1l1	isoform ratio	XM_039099257.2	0.54	48	0.62	3.2e-86	-5.72	1.09e-08	0.72	FALSE
PL	RT1-S2	isoform ratio	NM_001008857.1	0.35	6	0.17	1.2e-18	6.47	9.49e-11	0.67	FALSE
PL	RT1-S2	isoform ratio	XM_063278970.1	0.34	8	0.17	5.3e-18	-6.51	7.52e-11	0.66	FALSE
PL	RT1-T24-4	isoform ratio	NM_001008826.3	0.18	1357	0.13	2.2e-14	6.02	1.70e-09	0.43	FALSE
PL	Tmlhe	isoform ratio	XM_006255855.3	0.2	2589	0.15	9.9e-16	-5.26	1.41e-07	0.53	FALSE
PL	Tmlhe	isoform ratio	XM_039098401.2	0.12	2589	0.06	1.1e-06	-5.94	2.89e-09	0.52	FALSE
PL	Zfp57	isoform ratio	NM_213565.4	0.04	3517	0.03	1.6e-04	6.69	2.19e-11	0.09	FALSE
PL	Zfp57	isoform ratio	XM_039098787.2	0.03	3517	0.03	2.8e-04	-6.66	2.66e-11	0.09	FALSE
PL	Abcf1	intron excision ratio	chr20_2807464_2812594	0.23	1	0.23	4.9e-25	-5.8	6.57e-09	0.66	FALSE
PL	Abcf1	intron excision ratio	chr20_2811750_2812594	0.19	20	0.12	8.1e-13	5.29	1.26e-07	0.64	FALSE
PL	Cchcr1	intron excision ratio	chr20_3222005_3222255	0.03	1	0.02	1.7e-03	5.56	2.70e-08	0.03	FALSE
PL	Ddr1	intron excision ratio	chr20_3063726_3065290	0.11	21	0.05	3.8e-06	6	1.93e-09	0.52	FALSE
PL	Dhx16	intron excision ratio	chr20_2868393_2869501	0.06	1	0.08	3.9e-09	5.39	7.20e-08	0.16	FALSE
PL	Dhx16	intron excision ratio	chr20_2873408_2873611	0.03	8	0.01	1.3e-02	-5.95	2.63e-09	0.32	FALSE
PL	LOC134483846	intron excision ratio	chr20_2651165_2659663	0.65	25	0.7	5.1e-107	5.79	7.23e-09	0.67	FALSE
PL	LOC134483846	intron excision ratio	chr20_2671263_2712862	0.25	1	0.21	1.7e-22	5.7	1.23e-08	0.51	FALSE
PL	LOC134483846	intron excision ratio	chr20_2671263_2735001	0.27	1	0.22	1.8e-23	5.7	1.23e-08	0.51	FALSE
PL	RT1-A2	intron excision ratio	chr20_4852635_4852768	0.38	95	0.29	2.4e-32	-5.63	1.77e-08	0.51	FALSE
PL	RT1-CE10	intron excision ratio	chr20_3280797_3281038	0.14	3056	0.12	4.8e-13	5.83	5.58e-09	0.19	FALSE
PL	RT1-CE11	intron excision ratio	chr20_3280797_3281038	0.14	3055	0.12	4.8e-13	5.83	5.58e-09	0.19	FALSE
PL	RT1-CE14	intron excision ratio	chr20_3280797_3281038	0.13	2648	0.12	4.8e-13	5.86	4.49e-09	0.18	FALSE
PL	RT1-CE15	intron excision ratio	chr20_3280797_3281038	0.13	2609	0.12	4.7e-13	5.88	4.04e-09	0.2	FALSE
PL	RT1-CE15	intron excision ratio	chr20_3361215_3362182	0.15	2609	0.19	8.1e-20	5.56	2.70e-08	0	FALSE
PL	RT1-CE16	intron excision ratio	chr20_3280797_3281038	0.13	2619	0.12	5.2e-13	5.89	3.85e-09	0.2	FALSE
PL	RT1-CE16	intron excision ratio	chr20_3361215_3362182	0.15	2619	0.18	8.7e-20	5.57	2.61e-08	0	FALSE
PL	RT1-M3-1	intron excision ratio	chr20_1332603_1332806	0.05	3466	0.03	2.3e-04	6.88	5.99e-12	0.56	FALSE
PL	RT1-M3-1	intron excision ratio	chr20_1332983_1333267	0.04	1	0.02	2.1e-03	-6.39	1.62e-10	0.06	FALSE
PL	RT1-M3-1	intron excision ratio	chr20_1333075_1333267	0.04	1	0.03	4.7e-04	-6.43	1.31e-10	0.14	FALSE
PL	RT1-T24-4	intron excision ratio	chr20_2696283_2696461	0.08	1	0.06	2.9e-07	5.39	7.20e-08	0.16	FALSE
PL	RT1-T24-4	intron excision ratio	chr20_2746380_2746567	0.1	1357	0.08	2.1e-09	5.92	3.15e-09	0.64	FALSE
PL	Tmlhe	intron excision ratio	chr20_107697_110960	0.14	2589	0.08	2.4e-09	-6.57	5.18e-11	0.02	FALSE
PL	Tmlhe	intron excision ratio	chr20_111063_113298	0.05	1	0.03	1.5e-04	5.41	6.31e-08	0.04	FALSE
PL	Znrd1as1	intron excision ratio	chr20_1599314_1599608	0.03	2915	0.01	3.1e-02	-6.25	4.08e-10	0.03	FALSE
PL	Dhx16	mRNA stability	Dhx16	0.3	11	0.33	7.6e-37	5.52	3.34e-08	0.66	FALSE
PL	Flot1	mRNA stability	Flot1	0.19	1513	0.03	1.7e-04	6.05	1.48e-09	0.28	FALSE
PL	LOC134483846	mRNA stability	LOC134483846	0.77	30	0.74	6.0e-119	5.89	3.91e-09	0.68	FALSE
PL	Rps10	mRNA stability	Rps10	0.25	1	0.21	5.0e-22	5.34	9.04e-08	0.07	FALSE
PL	RT1-M6-2	mRNA stability	RT1-M6-2	0.34	33	0.34	8.6e-38	-6.14	8.06e-10	0	FALSE
PL	Tmlhe	mRNA stability	Tmlhe	0.24	2589	0.2	7.4e-22	-5.88	4.02e-09	0.53	FALSE
PL	Trim15	mRNA stability	Trim15	0.03	2465	0.03	8.1e-04	6.75	1.51e-11	0.16	FALSE
PL	Znrd1as1	mRNA stability	Znrd1as1	0.09	262	0.09	1.1e-09	5.22	1.78e-07	0	FALSE
pVTA	RT1-CE10	alternative polyA	XM_063279418.1	0.09	3056	0.06	2.4e-05	-5.27	1.34e-07	0.01	FALSE
pVTA	RT1-O1l1	alternative polyA	XM_039099255.2	0.41	1	0.37	3.1e-31	5.62	1.92e-08	0.45	FALSE
pVTA	RT1-O1l1	alternative polyA	XM_039099257.2	0.4	13	0.44	1.8e-38	-5.88	3.98e-09	0.71	FALSE
pVTA	Trim15	alternative polyA	NM_001291382.2	0.17	44	0.15	2.4e-12	-6.47	9.85e-11	0	FALSE
pVTA	Trim15	alternative polyA	XM_008772685.4	0.16	43	0.15	8.5e-12	6.36	1.97e-10	0	FALSE
pVTA	Trim26	alternative polyA	NM_001011665.3	0.52	17	0.4	3.0e-34	-5.36	8.38e-08	0	FALSE
pVTA	Trim26	alternative polyA	XM_039098637.2	0.52	26	0.4	6.3e-34	5.34	9.44e-08	0	FALSE
pVTA	Ddr1	alternative TSS	XM_017601561.3	0.06	4	0.03	3.5e-03	-5.93	3.06e-09	0.45	FALSE
pVTA	Rpp21	alternative TSS	XM_063279380.1	0.03	1559	0.01	2.0e-02	-6.35	2.22e-10	0.28	FALSE
pVTA	RT1-N2	alternative TSS	NM_001008854.2	0.11	1	0.12	1.6e-09	-5.88	4.20e-09	0.78	FALSE
pVTA	RT1-T18	alternative TSS	XM_063279363.1	0.13	17	0.1	2.6e-08	-5.66	1.49e-08	0.68	FALSE
pVTA	Abcf1	gene expression	Abcf1	0.35	19	0.37	1.5e-31	-5.74	9.49e-09	0.66	FALSE
pVTA	Cchcr1	gene expression	Cchcr1	0.47	48	0.43	3.0e-37	5.81	6.21e-09	0.07	FALSE
pVTA	Clic2	gene expression	Clic2	0.23	2656	0.18	2.7e-14	-6.08	1.21e-09	0.17	FALSE
pVTA	Gtf2h4	gene expression	Gtf2h4	0.07	8	0.05	5.8e-05	5.22	1.80e-07	0.58	FALSE
pVTA	Ilrun	gene expression	Ilrun	0.86	161	0.64	2.2e-66	-6.35	2.17e-10	0.88	FALSE
pVTA	LOC134483840	gene expression	LOC134483840	0.51	3533	0.2	7.3e-16	6.9	5.37e-12	0.54	FALSE
pVTA	LOC134483844	gene expression	LOC134483844	0.57	1	0.3	6.6e-25	-5.83	5.41e-09	0.89	FALSE
pVTA	LOC134483846	gene expression	LOC134483846	0.72	4	0.7	7.2e-78	5.88	4.08e-09	0.69	FALSE
pVTA	Mog	gene expression	Mog	0.4	1	0.23	3.9e-18	5.36	8.49e-08	0	FALSE
pVTA	Pacsin1	gene expression	Pacsin1	0.19	11	0.1	4.4e-08	-5.77	8.03e-09	0.89	FALSE
pVTA	Ppp1r11	gene expression	Ppp1r11	0.04	1	0.03	1.6e-03	5.28	1.32e-07	0.03	FALSE
pVTA	Rps10	gene expression	Rps10	0.59	27	0.5	4.7e-46	-5.46	4.85e-08	0.11	FALSE
pVTA	RT1-M3-1	gene expression	RT1-M3-1	0.71	23	0.68	7.4e-74	-6.52	7.11e-11	0.56	FALSE
pVTA	RT1-M6-2	gene expression	RT1-M6-2	0.36	169	0.25	4.7e-20	5.97	2.32e-09	0	FALSE
pVTA	RT1-N3	gene expression	RT1-N3	0.32	55	0.28	5.8e-23	5.52	3.34e-08	0.44	FALSE
pVTA	RT1-O1l1	gene expression	RT1-O1l1	0.66	17	0.67	6.6e-73	-5.58	2.42e-08	0.72	TRUE
pVTA	RT1-T18	gene expression	RT1-T18	0.65	24	0.51	2.1e-47	-5.87	4.31e-09	0.72	FALSE
pVTA	RT1-T24-4	gene expression	RT1-T24-4	0.16	18	0.09	1.4e-07	6.25	4.17e-10	0.64	FALSE
pVTA	Tcf19	gene expression	Tcf19	0.06	2456	0.04	7.2e-04	6.1	1.08e-09	0.47	FALSE
pVTA	Trim10	gene expression	Trim10	0.08	2465	0.07	2.3e-06	5.88	4.18e-09	0.02	FALSE
pVTA	Trim31	gene expression	Trim31	0.07	1	0.06	2.3e-05	5.5	3.83e-08	0.03	FALSE
pVTA	Tubb5	gene expression	Tubb5	0.08	8	0.07	4.2e-06	6.8	1.07e-11	0.65	FALSE
pVTA	Ubd	gene expression	Ubd	0.41	97	0.32	2.4e-26	6.29	3.25e-10	0	FALSE
pVTA	Vars2	gene expression	Vars2	0.15	32	0.16	7.8e-13	-5.39	6.98e-08	0.64	FALSE
pVTA	Abcf1	isoform ratio	NM_001109883.2	0.14	13	0.13	8.0e-11	5.89	3.93e-09	0.63	FALSE
pVTA	Abcf1	isoform ratio	XM_017601783.3	0.16	24	0.14	1.0e-11	-5.86	4.70e-09	0.63	FALSE
pVTA	Dhx16	isoform ratio	XM_039098480.2	0.21	16	0.14	2.7e-11	-5.32	1.03e-07	0.59	FALSE
pVTA	G4	isoform ratio	NM_001003975.3	0.04	18	0.02	1.4e-02	-5.43	5.68e-08	0.39	FALSE
pVTA	G4	isoform ratio	XM_063279383.1	0.04	15	0.03	3.8e-03	5.64	1.65e-08	0.43	FALSE
pVTA	LOC120098832	isoform ratio	XR_010060950.1	0.2	7	0.17	1.6e-13	-5.44	5.24e-08	0	FALSE
pVTA	RT1-CE12	isoform ratio	XM_063279098.1	0.04	14	0.02	6.0e-03	-5.42	5.94e-08	0.15	FALSE
pVTA	RT1-N2	isoform ratio	XM_017601671.3	0.19	1	0.2	9.1e-16	5.77	8.14e-09	0.65	FALSE
pVTA	RT1-O1l1	isoform ratio	XM_039099255.2	0.41	1	0.46	4.9e-41	5.77	8.14e-09	0.65	FALSE
pVTA	RT1-O1l1	isoform ratio	XM_039099257.2	0.44	1	0.44	3.9e-39	-5.77	8.14e-09	0.65	TRUE
pVTA	RT1-T24-4	isoform ratio	NM_001008826.3	0.15	1357	0.08	3.4e-07	5.83	5.56e-09	0.44	FALSE
pVTA	Abcf1	intron excision ratio	chr20_2807464_2811704	0.15	1	0.18	4.5e-14	5.8	6.75e-09	0.65	FALSE
pVTA	Abcf1	intron excision ratio	chr20_2807464_2812594	0.25	55	0.24	2.0e-19	-5.61	2.04e-08	0.64	FALSE
pVTA	Atat1	intron excision ratio	chr20_2856337_2858807	0.05	4	0.03	4.0e-03	-5.24	1.62e-07	0.4	FALSE
pVTA	Dhx16	intron excision ratio	chr20_2868362_2869501	0.04	1	0.03	2.4e-03	-5.62	1.94e-08	0.04	FALSE
pVTA	LOC134483846	intron excision ratio	chr20_2651165_2659663	0.85	30	0.58	9.0e-57	5.94	2.90e-09	0.67	FALSE
pVTA	RT1-T24-3	intron excision ratio	chr20_2729559_2730008	0.09	1	0.07	1.2e-06	-5.48	4.30e-08	0.2	FALSE
pVTA	RT1-T24-4	intron excision ratio	chr20_2696490_2696699	0.06	10	0.03	1.6e-03	5.34	9.50e-08	0.46	FALSE
pVTA	RT1-T24-4	intron excision ratio	chr20_2696746_2696880	0.43	90	0.37	2.5e-31	-5.35	8.98e-08	0	FALSE
pVTA	Tmlhe	intron excision ratio	chr20_107697_110960	0.06	4	0.03	8.6e-04	-6.22	4.88e-10	0.41	FALSE
pVTA	Znrd1as1	intron excision ratio	chr20_1595233_1599608	0.05	1	0.03	1.9e-03	-5.47	4.58e-08	0.03	FALSE
pVTA	Znrd1as1	intron excision ratio	chr20_1595233_1599935	0.05	1	0.08	1.1e-06	5.49	4.04e-08	0.02	FALSE
pVTA	Tmlhe	mRNA stability	Tmlhe	0.24	2589	0.1	2.3e-08	-5.36	8.29e-08	0.53	TRUE
RMTg	RT1-CE11	alternative polyA	NM_001008834.2	0.18	3055	0.1	1.1e-03	-5.41	6.27e-08	0.21	FALSE
RMTg	RT1-T18	alternative TSS	XM_063279362.1	0.3	14	0.19	8.5e-06	5.53	3.15e-08	0.62	FALSE
RMTg	RT1-T18	alternative TSS	XM_063279363.1	0.29	1	0.23	1.1e-06	-5.29	1.20e-07	0.06	FALSE
RMTg	RT1-T18	alternative TSS	XM_063279365.1	0.33	37	0.2	6.7e-06	-5.72	1.07e-08	0.61	TRUE
RMTg	Cchcr1	gene expression	Cchcr1	0.45	1	0.25	2.4e-07	5.61	2.05e-08	0.15	FALSE
RMTg	Ilrun	gene expression	Ilrun	0.67	1	0.37	8.4e-11	-5.66	1.47e-08	0.25	FALSE
RMTg	RT1-M3-1	gene expression	RT1-M3-1	0.67	1	0.53	2.0e-16	-6.01	1.91e-09	0.11	FALSE
RMTg	RT1-N2	gene expression	RT1-N2	0.18	1	0.11	9.2e-04	5.28	1.28e-07	0.05	FALSE
RMTg	RT1-O1l1	gene expression	RT1-O1l1	0.55	39	0.35	2.8e-10	-5.68	1.32e-08	0.7	FALSE
RMTg	RT1-S2	gene expression	RT1-S2	0.54	1	0.26	1.2e-07	5.62	1.94e-08	0.38	FALSE
RMTg	Trim39	gene expression	Trim39	0.15	1	0.03	5.4e-02	-5.33	9.95e-08	0.05	FALSE
RMTg	Ubd	gene expression	Ubd	0.22	3671	0.14	1.9e-04	5.63	1.77e-08	0.29	FALSE
RMTg	Znrd1as1	gene expression	Znrd1as1	0.33	1	0.21	3.2e-06	5.63	1.75e-08	0.05	FALSE
RMTg	Abcf1	isoform ratio	XM_017601783.3	0.13	1	0.08	3.3e-03	-5.29	1.20e-07	0.05	FALSE
RMTg	Dhx16	isoform ratio	NM_212496.2	0.19	1	0.08	4.0e-03	5.56	2.69e-08	0.05	FALSE
RMTg	RT1-T24-3	isoform ratio	XM_063279401.1	0.31	1	0.16	5.6e-05	-5.52	3.31e-08	0.1	FALSE
RMTg	Dhx16	mRNA stability	Dhx16	0.17	1	0.15	8.6e-05	5.28	1.28e-07	0.05	FALSE
RMTg	Mog	mRNA stability	Mog	0.2	3552	0.05	1.8e-02	5.8	6.47e-09	0.04	FALSE
RMTg	Znrd1as1	mRNA stability	Znrd1as1	0.13	555	0.1	1.2e-03	5.68	1.35e-08	0.08	FALSE