Best TWAS P=2.627703e-07 · Best GWAS P=0.04428322 conditioned to 0.01989867
| # | Tissue | Gene | Modality | RNA phenotype | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Liver | RGD1566134 | intron excision ratio | chr5:75204357:75224619 | 0.83 | 0.01 | enet | 37 | 0.31 | 9.3e-35 | -1.5 | -5.1 | 2.6e-07 | 0.71 | 0.03 | 0.05 | TRUE |
h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.