Best TWAS P = 9.21e-09 · Best GWAS P= 3.85e-07 conditioned to 1.76e-01
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Brain | Prp2l1 | gene expression | Prp2l1 | 0.19 | 2514 | 0.15 | 4.8e-14 | -5.74 | 9.21e-09 | 0.57 | TRUE |
| IC | Prp2l1 | gene expression | Prp2l1 | 0.12 | 2514 | 0.04 | 7.5e-03 | -5.25 | 1.56e-07 | 0.53 | FALSE |
| IC | Rundc3a | isoform ratio | XM_006247340.5 | 0.24 | 2009 | 0.2 | 7.8e-09 | -5.25 | 1.54e-07 | 0.09 | FALSE |
| PL | Prp2l1 | mRNA stability | Prp2l1 | 0.05 | 2514 | 0.03 | 5.3e-04 | -5.39 | 7.19e-08 | 0.74 | FALSE |