Best TWAS P=1.14e-10 · Best GWAS P=3.20e-09 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Dhx16 | alternative polyA | XM_039098480.1 | 0.1 | 1 | 0.09 | 5.0e-10 | 5.71 | 1.12e-08 | 0.7 | FALSE |
| Adipose | Dhx16 | alternative polyA | XM_039098480.1 | 0.11 | 1 | 0.1 | 9.7e-11 | 5.71 | 1.12e-08 | 0.7 | FALSE |
| Adipose | LOC120093125 | alternative polyA | XM_039099255.1 | 0.52 | 204 | 0.51 | 4.2e-66 | -5.85 | 4.84e-09 | 0.78 | FALSE |
| Adipose | LOC120093125 | alternative polyA | XM_039099257.1 | 0.52 | 209 | 0.53 | 1.1e-69 | 5.87 | 4.44e-09 | 0.78 | FALSE |
| Adipose | LOC120093125 | alternative polyA | XM_039099255.1 | 0.52 | 209 | 0.51 | 6.4e-66 | -5.85 | 4.79e-09 | 0.78 | FALSE |
| Adipose | LOC120093125 | alternative polyA | XM_039099257.1 | 0.51 | 210 | 0.52 | 3.3e-67 | 5.88 | 4.04e-09 | 0.78 | FALSE |
| Adipose | RT1-N2 | alternative polyA | NM_001008854.2 | 0.37 | 13 | 0.36 | 3.2e-41 | -5.61 | 2.00e-08 | 0.76 | FALSE |
| Adipose | RT1-N2 | alternative polyA | XM_006255938.4 | 0.32 | 14 | 0.31 | 2.3e-34 | 5.7 | 1.23e-08 | 0.76 | FALSE |
| Adipose | RT1-N2 | alternative polyA | NM_001008854.2 | 0.32 | 13 | 0.32 | 5.3e-36 | -5.36 | 8.26e-08 | 0.73 | FALSE |
| Adipose | RT1-N2 | alternative polyA | XM_039098786.1 | 0.35 | 1 | 0.34 | 1.1e-38 | -5.74 | 9.61e-09 | 0.74 | FALSE |
| Adipose | Ddr1 | alternative TSS | NM_001166022.1 | 0.03 | 1269 | 0.01 | 8.3e-03 | 5.21 | 1.92e-07 | 0.51 | FALSE |
| Adipose | Ddr1 | alternative TSS | NM_001166022.1 | 0.02 | 1269 | 0.01 | 8.9e-03 | 5.31 | 1.07e-07 | 0.51 | FALSE |
| Adipose | RT1-N2 | alternative TSS | NM_001008854.2 | 0.36 | 1 | 0.38 | 3.7e-44 | 5.64 | 1.68e-08 | 0.63 | FALSE |
| Adipose | RT1-N2 | alternative TSS | XM_039098782.1 | 0.48 | 7 | 0.21 | 1.7e-22 | 5.6 | 2.11e-08 | 0.76 | FALSE |
| Adipose | RT1-N2 | alternative TSS | XM_039098786.1 | 0.39 | 5 | 0.4 | 5.1e-48 | 5.6 | 2.19e-08 | 0.76 | FALSE |
| Adipose | RT1-N2 | alternative TSS | NM_001008854.2 | 0.06 | 954 | 0.05 | 1.2e-06 | -5.83 | 5.38e-09 | 0.76 | FALSE |
| Adipose | RT1-N2 | alternative TSS | XM_039098784.1 | 0.02 | 1 | 0.01 | 1.1e-02 | -5.64 | 1.68e-08 | 0.04 | FALSE |
| Adipose | RT1-N3 | alternative TSS | NM_001008855.2 | 0.21 | 1 | 0.23 | 2.9e-25 | -5.6 | 2.15e-08 | 0.57 | FALSE |
| Adipose | RT1-N3 | alternative TSS | XM_039098420.1 | 0.47 | 12 | 0.47 | 1.1e-57 | -5.96 | 2.59e-09 | 0.77 | FALSE |
| Adipose | RT1-N3 | alternative TSS | NM_001008855.2 | 0.38 | 44 | 0.42 | 1.9e-50 | 5.77 | 7.70e-09 | 0.77 | FALSE |
| Adipose | RT1-N3 | alternative TSS | XM_039098420.1 | 0.56 | 19 | 0.55 | 6.3e-74 | 5.86 | 4.60e-09 | 0.77 | FALSE |
| Adipose | Atat1 | gene expression | Atat1 | 0.07 | 6 | 0.06 | 4.0e-07 | 5.8 | 6.46e-09 | 0.71 | FALSE |
| Adipose | Cb707485 | gene expression | Cb707485 | 0.22 | 29 | 0.2 | 6.4e-22 | -5.58 | 2.42e-08 | 0.74 | FALSE |
| Adipose | Cchcr1 | gene expression | Cchcr1 | 0.43 | 34 | 0.45 | 4.7e-55 | -5.42 | 6.03e-08 | 0.75 | FALSE |
| Adipose | Ddr1 | gene expression | Ddr1 | 0.68 | 18 | 0.67 | 9.1e-100 | 5.46 | 4.68e-08 | 0.74 | FALSE |
| Adipose | Dhx16 | gene expression | Dhx16 | 0.23 | 1269 | 0.19 | 3.3e-21 | -5.48 | 4.19e-08 | 0.75 | FALSE |
| Adipose | Gnl1 | gene expression | Gnl1 | 0.07 | 8 | 0.06 | 1.8e-07 | -5.44 | 5.42e-08 | 0.74 | FALSE |
| Adipose | LOC102553244 | gene expression | LOC102553244 | 0.35 | 1 | 0.33 | 9.6e-38 | -5.71 | 1.12e-08 | 0.7 | FALSE |
| Adipose | LOC120093125 | gene expression | LOC120093125 | 0.78 | 24 | 0.73 | 6.5e-118 | -5.67 | 1.40e-08 | 0.78 | FALSE |
| Adipose | LOC120098966 | gene expression | LOC120098966 | 0.23 | 8 | 0.23 | 1.5e-25 | -5.19 | 2.09e-07 | 0.27 | FALSE |
| Adipose | LOC120098967 | gene expression | LOC120098967 | 0.36 | 8 | 0.38 | 1.5e-44 | 5.65 | 1.60e-08 | 0.74 | FALSE |
| Adipose | Nrm | gene expression | Nrm | 0.03 | 1 | 0.02 | 5.5e-03 | -5.75 | 9.11e-09 | 0.1 | FALSE |
| Adipose | RGD1302996 | gene expression | RGD1302996 | 0.06 | 1 | 0.05 | 1.8e-06 | -5.64 | 1.75e-08 | 0.52 | FALSE |
| Adipose | RT1-N2 | gene expression | RT1-N2 | 0.59 | 48 | 0.68 | 2.2e-104 | -5.62 | 1.94e-08 | 0.77 | FALSE |
| Adipose | RT1-N3 | gene expression | RT1-N3 | 0.31 | 24 | 0.31 | 2.7e-35 | -5.67 | 1.40e-08 | 0.76 | FALSE |
| Adipose | Vars2 | gene expression | Vars2 | 0.12 | 1 | 0.12 | 6.0e-13 | 5.77 | 7.88e-09 | 0.77 | FALSE |
| Adipose | Dhx16 | isoform ratio | XM_039098480.1 | 0.11 | 1 | 0.1 | 5.2e-11 | 5.71 | 1.12e-08 | 0.7 | FALSE |
| Adipose | LOC120093125 | isoform ratio | XM_039099255.1 | 0.49 | 93 | 0.47 | 7.6e-58 | -5.91 | 3.46e-09 | 0.78 | FALSE |
| Adipose | LOC120093125 | isoform ratio | XM_039099256.1 | 0.29 | 10 | 0.28 | 1.1e-31 | 5.4 | 6.54e-08 | 0.75 | FALSE |
| Adipose | LOC120093125 | isoform ratio | XM_039099257.1 | 0.58 | 208 | 0.6 | 3.0e-84 | 5.83 | 5.53e-09 | 0.78 | FALSE |
| Adipose | LOC120093125 | isoform ratio | XM_039099258.1 | 0.47 | 184 | 0.39 | 9.3e-46 | -5.98 | 2.29e-09 | 0.78 | FALSE |
| Adipose | Nrm | isoform ratio | NM_212508.2 | 0.05 | 1 | 0.03 | 1.5e-04 | 5.75 | 8.81e-09 | 0.48 | FALSE |
| Adipose | Nrm | isoform ratio | XM_039098800.1 | 0.02 | 1269 | 0.01 | 3.0e-02 | 5.66 | 1.54e-08 | 0.52 | FALSE |
| Adipose | RT1-N2 | isoform ratio | XM_017601671.2 | 0.31 | 9 | 0.29 | 5.5e-33 | 5.72 | 1.04e-08 | 0.76 | FALSE |
| Adipose | RT1-N2 | isoform ratio | XM_039098785.1 | 0.55 | 1 | 0.51 | 9.0e-65 | 5.8 | 6.48e-09 | 0.81 | FALSE |
| Adipose | RT1-N3 | isoform ratio | NM_001008855.2 | 0.28 | 20 | 0.27 | 9.5e-30 | 5.88 | 4.11e-09 | 0.77 | FALSE |
| Adipose | RT1-N3 | isoform ratio | XM_039098420.1 | 0.51 | 15 | 0.49 | 1.6e-62 | 5.95 | 2.72e-09 | 0.77 | FALSE |
| Adipose | RT1-T24-1 | intron excision ratio | chr20_2688990_2690922 | 0.09 | 22 | -0 | 4.3e-01 | 5.18 | 2.19e-07 | 0.13 | FALSE |
| Adipose | RT1-T24-4 | intron excision ratio | chr20_2691465_2691643 | 0.43 | 28 | 0.05 | 1.4e-06 | -5.48 | 4.34e-08 | 0.65 | FALSE |
| Adipose | RT1-T24-4 | intron excision ratio | chr20_2691672_2691881 | 0.49 | 1129 | 0.07 | 3.2e-08 | 5.26 | 1.43e-07 | 0.76 | FALSE |
| Adipose | RT1-T24-4 | intron excision ratio | chr20_2691928_2692062 | 0.69 | 1 | 0.09 | 4.2e-10 | 5.78 | 7.45e-09 | 0.78 | FALSE |
| Adipose | G4 | mRNA stability | G4 | 0.03 | 1 | 0.03 | 7.6e-04 | 5.69 | 1.25e-08 | 0.8 | FALSE |
| Adipose | Mrps18b | mRNA stability | Mrps18b | 0.04 | 1247 | 0.03 | 1.6e-04 | 5.65 | 1.63e-08 | 0.67 | FALSE |
| Adipose | RT1-N3 | mRNA stability | RT1-N3 | 0.02 | 3 | 0.02 | 1.3e-03 | 5.61 | 1.99e-08 | 0.61 | FALSE |
| BLA | Dhx16 | alternative polyA | XM_039098480.1 | 0.24 | 1315 | 0.16 | 1.1e-08 | -5.71 | 1.13e-08 | 0.71 | FALSE |
| BLA | Dhx16 | alternative polyA | XM_039098480.1 | 0.23 | 1315 | 0.16 | 4.4e-09 | -5.74 | 9.35e-09 | 0.71 | FALSE |
| BLA | Dhx16 | alternative polyA | XM_039098481.1 | 0.08 | 1315 | 0.03 | 7.8e-03 | 5.92 | 3.17e-09 | 0.49 | FALSE |
| BLA | LOC120093125 | alternative polyA | XM_039099255.1 | 0.3 | 948 | 0.22 | 4.9e-12 | 5.86 | 4.61e-09 | 0.76 | FALSE |
| BLA | LOC120093125 | alternative polyA | XM_039099257.1 | 0.37 | 948 | 0.29 | 9.9e-16 | -5.84 | 5.19e-09 | 0.75 | FALSE |
| BLA | LOC120093125 | alternative polyA | XM_039099255.1 | 0.29 | 948 | 0.21 | 2.1e-11 | 5.85 | 4.85e-09 | 0.76 | FALSE |
| BLA | LOC120093125 | alternative polyA | XM_039099257.1 | 0.38 | 948 | 0.3 | 1.3e-16 | -5.85 | 5.03e-09 | 0.76 | FALSE |
| BLA | LOC120098829 | alternative polyA | XR_005497433.1 | 0.15 | 17 | 0.08 | 3.0e-05 | 5.41 | 6.44e-08 | 0.03 | FALSE |
| BLA | LOC120098967 | alternative polyA | XR_005497790.1 | 0.24 | 1 | 0.15 | 1.5e-08 | 5.83 | 5.53e-09 | 0.81 | FALSE |
| BLA | LOC120098967 | alternative polyA | XR_005497791.1 | 0.24 | 1258 | 0.15 | 3.5e-08 | 5.83 | 5.45e-09 | 0.73 | FALSE |
| BLA | RT1-N2 | alternative polyA | XM_017601671.2 | 0.35 | 1 | 0.21 | 2.2e-11 | -5.6 | 2.15e-08 | 0.55 | FALSE |
| BLA | RT1-N2 | alternative polyA | XM_039098784.1 | 0.14 | 999 | 0.09 | 2.2e-05 | -5.5 | 3.88e-08 | 0.6 | FALSE |
| BLA | RT1-N2 | alternative polyA | XM_039098786.1 | 0.27 | 999 | 0.2 | 9.5e-11 | 5.82 | 5.80e-09 | 0.73 | FALSE |
| BLA | Cchcr1 | alternative TSS | NM_001002822.2 | 0.08 | 1 | 0.04 | 4.9e-03 | -5.69 | 1.25e-08 | 0.06 | FALSE |
| BLA | RT1-N2 | alternative TSS | NM_001008854.2 | 0.21 | 68 | 0.12 | 4.5e-07 | 5.41 | 6.28e-08 | 0.7 | FALSE |
| BLA | RT1-N3 | alternative TSS | XM_039098420.1 | 0.41 | 1 | 0.3 | 9.1e-17 | 5.77 | 7.98e-09 | 0.76 | FALSE |
| BLA | Abcf1 | gene expression | Abcf1 | 0.56 | 1268 | 0.3 | 2.0e-16 | -6.45 | 1.14e-10 | 0.73 | TRUE |
| BLA | Cchcr1 | gene expression | Cchcr1 | 0.82 | 56 | 0.65 | 1.2e-44 | -5.76 | 8.20e-09 | 0.73 | FALSE |
| BLA | Cdsn | gene expression | Cdsn | 0.14 | 23 | 0.09 | 1.1e-05 | -5.66 | 1.52e-08 | 0.73 | FALSE |
| BLA | Ddr1 | gene expression | Ddr1 | 0.28 | 6 | 0.23 | 2.2e-12 | 5.86 | 4.52e-09 | 0.73 | TRUE |
| BLA | Dhx16 | gene expression | Dhx16 | 0.12 | 1315 | 0.06 | 3.1e-04 | -5.72 | 1.09e-08 | 0.67 | FALSE |
| BLA | G4 | gene expression | G4 | 0.2 | 21 | 0.12 | 4.2e-07 | -5.45 | 5.16e-08 | 0.31 | FALSE |
| BLA | Gtf2h4 | gene expression | Gtf2h4 | 0.18 | 1289 | 0.13 | 1.5e-07 | 5.42 | 5.90e-08 | 0.72 | FALSE |
| BLA | LOC120093125 | gene expression | LOC120093125 | 0.67 | 51 | 0.61 | 5.1e-41 | -5.79 | 7.12e-09 | 0.76 | FALSE |
| BLA | Mdc1 | gene expression | Mdc1 | 0.53 | 20 | 0.33 | 4.4e-18 | -5.2 | 1.99e-07 | 0.07 | FALSE |
| BLA | RT1-N2 | gene expression | RT1-N2 | 0.88 | 53 | 0.65 | 2.3e-44 | 5.74 | 9.20e-09 | 0.73 | FALSE |
| BLA | RT1-O1 | gene expression | RT1-O1 | 0.88 | 49 | 0.63 | 4.7e-43 | 5.84 | 5.18e-09 | 0.72 | FALSE |
| BLA | RT1-S2 | gene expression | RT1-S2 | 0.63 | 7 | 0.6 | 2.8e-39 | 5.75 | 9.05e-09 | 0.73 | FALSE |
| BLA | RT1-S3 | gene expression | RT1-S3 | 0.33 | 1 | 0.19 | 2.5e-10 | 5.73 | 9.88e-09 | 0.23 | TRUE |
| BLA | RT1-T18 | gene expression | RT1-T18 | 0.56 | 921 | 0.45 | 3.4e-26 | -5.8 | 6.77e-09 | 0.76 | FALSE |
| BLA | RT1-T24-2 | gene expression | RT1-T24-2 | 0.23 | 1239 | 0.17 | 1.6e-09 | -5.37 | 8.05e-08 | 0.73 | FALSE |
| BLA | RT1-T24-3 | gene expression | RT1-T24-3 | 0.64 | 1206 | 0.57 | 7.8e-37 | 5.35 | 8.82e-08 | 0.53 | FALSE |
| BLA | Tcf19 | gene expression | Tcf19 | 0.25 | 13 | 0.21 | 2.4e-11 | 5.51 | 3.55e-08 | 0.76 | FALSE |
| BLA | Vars2 | gene expression | Vars2 | 0.13 | 1320 | 0.06 | 5.0e-04 | -5.8 | 6.74e-09 | 0.68 | FALSE |
| BLA | Abcf1 | isoform ratio | NM_001109883.2 | 0.23 | 1 | 0.2 | 4.9e-11 | -5.75 | 9.00e-09 | 0.72 | FALSE |
| BLA | Abcf1 | isoform ratio | XM_017601783.2 | 0.23 | 1 | 0.2 | 5.7e-11 | 5.75 | 9.00e-09 | 0.72 | FALSE |
| BLA | Dhx16 | isoform ratio | NM_212496.2 | 0.11 | 1 | 0.08 | 4.8e-05 | -5.71 | 1.16e-08 | 0.22 | FALSE |
| BLA | Dhx16 | isoform ratio | XM_039098480.1 | 0.16 | 1315 | 0.12 | 9.1e-07 | -5.64 | 1.67e-08 | 0.67 | FALSE |
| BLA | Dhx16 | isoform ratio | XM_039098481.1 | 0.08 | 1315 | 0.03 | 9.5e-03 | -5.8 | 6.62e-09 | 0.56 | FALSE |
| BLA | LOC120093125 | isoform ratio | XM_039099257.1 | 0.37 | 12 | 0.34 | 7.4e-19 | 5.92 | 3.17e-09 | 0.75 | FALSE |
| BLA | RT1-CE5 | isoform ratio | XM_039098662.1 | 0.22 | 2983 | 0.09 | 9.6e-06 | -5.38 | 7.26e-08 | 0.44 | FALSE |
| BLA | RT1-CE5 | isoform ratio | XM_039098665.1 | 0.42 | 1 | 0.24 | 7.4e-13 | -5.18 | 2.26e-07 | 0.2 | FALSE |
| BLA | RT1-N2 | isoform ratio | XM_017601671.2 | 0.24 | 95 | 0.12 | 5.1e-07 | -5.86 | 4.63e-09 | 0.71 | FALSE |
| BLA | RT1-N2 | isoform ratio | XM_039098783.1 | 0.34 | 999 | 0.22 | 3.7e-12 | 5.78 | 7.30e-09 | 0.74 | FALSE |
| BLA | RT1-N2 | isoform ratio | XM_039098785.1 | 0.86 | 1 | 0.35 | 1.4e-19 | 5.89 | 3.86e-09 | 0.87 | FALSE |
| BLA | RT1-N2 | isoform ratio | XM_039098786.1 | 0.26 | 1 | 0.22 | 5.8e-12 | -5.8 | 6.48e-09 | 0.8 | FALSE |
| BLA | RT1-N3 | isoform ratio | XM_039098420.1 | 0.45 | 27 | 0.36 | 6.2e-20 | -5.84 | 5.30e-09 | 0.74 | FALSE |
| BLA | RT1-S3 | isoform ratio | NM_001008886.2 | 0.1 | 1 | 0.06 | 2.6e-04 | 5.69 | 1.25e-08 | 0.14 | FALSE |
| BLA | RT1-S3 | isoform ratio | XM_006255917.4 | 0.1 | 1 | 0.07 | 2.0e-04 | -5.75 | 9.00e-09 | 0.19 | FALSE |
| BLA | Abcf1 | intron excision ratio | chr20_2802656_2807786 | 0.25 | 1 | 0.13 | 2.6e-07 | 5.75 | 9.00e-09 | 0.67 | FALSE |
| BLA | Abcf1 | intron excision ratio | chr20_2806942_2807786 | 0.3 | 1 | 0.1 | 3.8e-06 | -5.75 | 9.00e-09 | 0.58 | FALSE |
| BLA | Dhx16 | intron excision ratio | chr20_2863558_2864697 | 0.1 | 1 | 0.01 | 1.1e-01 | 5.77 | 7.72e-09 | 0.04 | FALSE |
| BLA | Flot1 | intron excision ratio | chr20_2927515_2927812 | 0.12 | 1 | 0.05 | 8.6e-04 | -5.7 | 1.17e-08 | 0.06 | FALSE |
| BLA | RT1-CE11 | intron excision ratio | chr20_3277094_3317031 | 0.24 | 262 | 0.08 | 6.4e-05 | 5.69 | 1.28e-08 | 0.03 | FALSE |
| BLA | RT1-CE12 | intron excision ratio | chr20_3277094_3317031 | 0.25 | 250 | 0.08 | 6.3e-05 | 5.67 | 1.43e-08 | 0.03 | FALSE |
| BLA | RT1-CE15 | intron excision ratio | chr20_3356537_3357504 | 0.17 | 1 | 0.03 | 8.5e-03 | 5.24 | 1.63e-07 | 0.05 | FALSE |
| BLA | RT1-CE16 | intron excision ratio | chr20_3356537_3357504 | 0.17 | 1 | 0.03 | 8.1e-03 | 5.23 | 1.70e-07 | 0.05 | FALSE |
| BLA | RT1-T24-1 | intron excision ratio | chr20_2690616_2690922 | 0.11 | 1 | 0.03 | 1.2e-02 | 5.6 | 2.16e-08 | 0.05 | FALSE |
| BLA | RT1-T24-1 | intron excision ratio | chr20_2773698_2774009 | 0.08 | 1 | 0.01 | 5.9e-02 | 5.34 | 9.19e-08 | 0.04 | FALSE |
| BLA | RT1-T24-3 | intron excision ratio | chr20_2688990_2690344 | 0.14 | 1 | 0.05 | 1.2e-03 | -5.67 | 1.39e-08 | 0.06 | FALSE |
| BLA | RT1-T24-3 | intron excision ratio | chr20_2690616_2690922 | 0.11 | 1 | 0.05 | 1.0e-03 | 5.6 | 2.16e-08 | 0.05 | FALSE |
| BLA | RT1-T24-3 | intron excision ratio | chr20_2694069_2694175 | 0.12 | 8 | 0.05 | 1.2e-03 | -5.66 | 1.49e-08 | 0.5 | FALSE |
| BLA | RT1-T24-3 | intron excision ratio | chr20_2694069_2724607 | 0.12 | 1206 | 0.02 | 3.6e-02 | 5.64 | 1.66e-08 | 0.5 | FALSE |
| BLA | RT1-T24-3 | intron excision ratio | chr20_2724501_2724607 | 0.19 | 1206 | 0.07 | 1.3e-04 | -5.73 | 9.91e-09 | 0.66 | FALSE |
| BLA | RT1-T24-3 | intron excision ratio | chr20_2773698_2774009 | 0.08 | 1 | 0.02 | 3.4e-02 | 5.81 | 6.32e-09 | 0.05 | FALSE |
| BLA | RT1-T24-4 | intron excision ratio | chr20_2688990_2690344 | 0.13 | 1 | 0.05 | 7.2e-04 | -5.67 | 1.39e-08 | 0.06 | FALSE |
| BLA | RT1-T24-4 | intron excision ratio | chr20_2690616_2690922 | 0.11 | 1 | 0.05 | 9.5e-04 | 5.67 | 1.39e-08 | 0.05 | FALSE |
| BLA | RT1-T24-4 | intron excision ratio | chr20_2694069_2694175 | 0.12 | 8 | 0.05 | 1.2e-03 | -5.66 | 1.49e-08 | 0.5 | FALSE |
| BLA | RT1-T24-4 | intron excision ratio | chr20_2694069_2724607 | 0.12 | 1174 | 0.02 | 3.7e-02 | 5.65 | 1.63e-08 | 0.5 | FALSE |
| BLA | RT1-T24-4 | intron excision ratio | chr20_2724501_2724607 | 0.19 | 1174 | 0.07 | 1.3e-04 | -5.74 | 9.61e-09 | 0.67 | FALSE |
| BLA | RT1-T24-4 | intron excision ratio | chr20_2773698_2774009 | 0.08 | 1 | 0.02 | 2.8e-02 | 5.81 | 6.32e-09 | 0.05 | FALSE |
| BLA | Dhx16 | mRNA stability | Dhx16 | 0.24 | 1 | 0.24 | 5.3e-13 | -5.76 | 8.49e-09 | 0.73 | FALSE |
| Brain | Dhx16 | alternative polyA | NM_212496.2 | 0.44 | 1 | 0.19 | 2.9e-17 | -5.6 | 2.13e-08 | 0.53 | FALSE |
| Brain | Dhx16 | alternative polyA | XM_039098480.1 | 0.44 | 32 | 0.35 | 6.5e-34 | 5.58 | 2.36e-08 | 0.7 | FALSE |
| Brain | Dhx16 | alternative polyA | NM_212496.2 | 0.13 | 1315 | 0.03 | 1.1e-03 | 5.22 | 1.82e-07 | 0.51 | FALSE |
| Brain | Dhx16 | alternative polyA | XM_039098480.1 | 0.45 | 31 | 0.37 | 2.6e-36 | 5.55 | 2.79e-08 | 0.71 | FALSE |
| Brain | LOC120093125 | alternative polyA | XM_039099256.1 | 0.41 | 1 | 0.3 | 2.6e-28 | -5.64 | 1.68e-08 | 0.63 | FALSE |
| Brain | LOC120093125 | alternative polyA | XM_039099257.1 | 0.17 | 948 | 0.14 | 5.8e-13 | -5.49 | 4.07e-08 | 0.76 | FALSE |
| Brain | LOC120093125 | alternative polyA | XM_039099256.1 | 0.39 | 8 | 0.23 | 1.8e-21 | 5.58 | 2.34e-08 | 0.76 | FALSE |
| Brain | LOC120093125 | alternative polyA | XM_039099257.1 | 0.17 | 948 | 0.14 | 1.3e-12 | -5.48 | 4.36e-08 | 0.76 | FALSE |
| Brain | LOC120098967 | alternative polyA | XR_005497790.1 | 0.18 | 1 | 0.12 | 5.0e-11 | 5.8 | 6.56e-09 | 0.78 | FALSE |
| Brain | LOC120098967 | alternative polyA | XR_005497791.1 | 0.18 | 14 | 0.12 | 5.7e-11 | -5.92 | 3.31e-09 | 0.72 | FALSE |
| Brain | RT1-N2 | alternative polyA | XM_039098784.1 | 0.05 | 1 | 0.04 | 2.8e-04 | 5.81 | 6.13e-09 | 0.23 | FALSE |
| Brain | Clic1 | alternative TSS | NM_001002807.2 | 0.08 | 63 | 0.07 | 4.5e-07 | 5.34 | 9.08e-08 | 0.62 | FALSE |
| Brain | RT1-CE1 | alternative TSS | XM_039098652.1 | 0.07 | 16 | 0.06 | 4.1e-06 | -5.29 | 1.21e-07 | 0.07 | FALSE |
| Brain | RT1-CE3 | alternative TSS | NM_001008841.2 | 0.31 | 28 | 0.44 | 8.9e-45 | 5.18 | 2.18e-07 | 0.04 | FALSE |
| Brain | RT1-N3 | alternative TSS | NM_001008855.2 | 0.29 | 17 | 0.24 | 7.2e-22 | -5.94 | 2.93e-09 | 0.76 | FALSE |
| Brain | RT1-N3 | alternative TSS | XM_039098420.1 | 0.45 | 19 | 0.39 | 6.4e-38 | 5.7 | 1.18e-08 | 0.73 | FALSE |
| Brain | RT1-N3 | alternative TSS | XM_039098421.1 | 0.11 | 19 | 0.09 | 2.0e-08 | 5.92 | 3.26e-09 | 0.76 | FALSE |
| Brain | Abcf1 | gene expression | Abcf1 | 0.48 | 14 | 0.43 | 1.2e-43 | 5.58 | 2.47e-08 | 0.72 | FALSE |
| Brain | Atf6b | gene expression | Atf6b | 0.23 | 1 | 0.19 | 1.4e-17 | -5.26 | 1.45e-07 | 0.81 | FALSE |
| Brain | Cchcr1 | gene expression | Cchcr1 | 0.58 | 248 | 0.68 | 1.2e-86 | -5.73 | 1.02e-08 | 0.74 | FALSE |
| Brain | Cdsn | gene expression | Cdsn | 0.06 | 1 | 0.02 | 2.5e-03 | -5.83 | 5.53e-09 | 0.09 | FALSE |
| Brain | Ddr1 | gene expression | Ddr1 | 0.15 | 1 | 0.13 | 5.7e-12 | -5.6 | 2.15e-08 | 0.53 | FALSE |
| Brain | Dhx16 | gene expression | Dhx16 | 0.48 | 1315 | 0.47 | 2.2e-48 | -5.93 | 3.10e-09 | 0.72 | FALSE |
| Brain | Gtf2h4 | gene expression | Gtf2h4 | 0.15 | 15 | 0.14 | 2.9e-13 | -5.66 | 1.56e-08 | 0.73 | FALSE |
| Brain | LOC120093125 | gene expression | LOC120093125 | 0.41 | 25 | 0.66 | 5.8e-82 | 5.9 | 3.73e-09 | 0.76 | FALSE |
| Brain | Mdc1 | gene expression | Mdc1 | 0.36 | 1315 | 0.41 | 1.7e-40 | -5.36 | 8.42e-08 | 0.66 | FALSE |
| Brain | RT1-N2 | gene expression | RT1-N2 | 0.54 | 25 | 0.72 | 1.9e-94 | 5.52 | 3.31e-08 | 0.74 | FALSE |
| Brain | RT1-O1 | gene expression | RT1-O1 | 0.53 | 1038 | 0.66 | 5.3e-81 | 5.69 | 1.28e-08 | 0.74 | FALSE |
| Brain | RT1-S2 | gene expression | RT1-S2 | 0.44 | 1016 | 0.66 | 2.4e-80 | 5.55 | 2.90e-08 | 0.73 | FALSE |
| Brain | RT1-T18 | gene expression | RT1-T18 | 0.37 | 5 | 0.43 | 5.8e-43 | -5.64 | 1.67e-08 | 0.76 | FALSE |
| Brain | Abcf1 | isoform ratio | NM_001109883.2 | 0.32 | 7 | 0.46 | 1.7e-47 | 5.39 | 7.22e-08 | 0.71 | FALSE |
| Brain | Abcf1 | isoform ratio | XM_017601783.2 | 0.31 | 6 | 0.46 | 2.8e-47 | -5.42 | 5.90e-08 | 0.72 | FALSE |
| Brain | Clic1 | isoform ratio | NM_001002807.2 | 0.07 | 34 | 0.07 | 7.8e-07 | -5.19 | 2.13e-07 | 0.57 | FALSE |
| Brain | Dhx16 | isoform ratio | NM_212496.2 | 0.26 | 1315 | 0.24 | 4.4e-22 | 5.57 | 2.54e-08 | 0.72 | FALSE |
| Brain | Dhx16 | isoform ratio | XM_039098480.1 | 0.41 | 24 | 0.48 | 1.9e-50 | -5.63 | 1.77e-08 | 0.71 | FALSE |
| Brain | LOC120093125 | isoform ratio | XM_039099255.1 | 0.11 | 1 | 0.11 | 2.9e-10 | 5.77 | 7.88e-09 | 0.78 | FALSE |
| Brain | LOC120093125 | isoform ratio | XM_039099256.1 | 0.41 | 8 | 0.46 | 1.3e-47 | 5.52 | 3.41e-08 | 0.74 | FALSE |
| Brain | LOC120093125 | isoform ratio | XM_039099257.1 | 0.22 | 1 | 0.29 | 1.1e-26 | 5.64 | 1.68e-08 | 0.63 | FALSE |
| Brain | RT1-N2 | isoform ratio | XM_017601671.2 | 0.62 | 1 | 0.15 | 4.7e-14 | -5.6 | 2.15e-08 | 0.55 | FALSE |
| Brain | RT1-N2 | isoform ratio | XM_039098783.1 | 0.28 | 17 | 0.36 | 2.8e-34 | -5.31 | 1.09e-07 | 0.74 | FALSE |
| Brain | RT1-N2 | isoform ratio | XM_039098785.1 | 0.33 | 17 | 0.52 | 9.6e-56 | 5.28 | 1.30e-07 | 0.73 | FALSE |
| Brain | RT1-N2 | isoform ratio | XM_039098786.1 | 0.43 | 16 | 0.37 | 8.3e-36 | -5.81 | 6.31e-09 | 0.73 | TRUE |
| Brain | Abcf1 | intron excision ratio | chr20_2802656_2806896 | 0.18 | 1 | 0.06 | 3.8e-06 | -5.67 | 1.41e-08 | 0.6 | FALSE |
| Brain | Abcf1 | intron excision ratio | chr20_2802656_2807786 | 0.27 | 1268 | 0.15 | 8.2e-14 | -5.58 | 2.37e-08 | 0.71 | FALSE |
| Brain | Abcf1 | intron excision ratio | chr20_2806942_2807786 | 0.18 | 18 | 0.06 | 1.5e-06 | -5.95 | 2.67e-09 | 0.72 | FALSE |
| Brain | Dhx16 | intron excision ratio | chr20_2863589_2864697 | 0.24 | 1315 | 0.07 | 3.0e-07 | 5.79 | 6.92e-09 | 0.69 | FALSE |
| Brain | RT1-T24-1 | intron excision ratio | chr20_2688990_2690344 | 0.27 | 1253 | 0.09 | 8.7e-09 | 5.31 | 1.11e-07 | 0.49 | FALSE |
| Brain | RT1-T24-1 | intron excision ratio | chr20_2688990_2690922 | 0.17 | 13 | 0.07 | 7.4e-07 | 5.65 | 1.61e-08 | 0.52 | FALSE |
| Brain | RT1-T24-1 | intron excision ratio | chr20_2773698_2774009 | 0.07 | 1 | 0.03 | 6.5e-04 | 5.83 | 5.39e-09 | 0.04 | FALSE |
| Brain | RT1-T24-3 | intron excision ratio | chr20_2694069_2724607 | 0.59 | 17 | 0.19 | 2.0e-17 | 5.24 | 1.60e-07 | 0 | FALSE |
| Brain | RT1-T24-4 | intron excision ratio | chr20_2688990_2690344 | 0.28 | 1174 | 0.09 | 1.0e-08 | 5.29 | 1.21e-07 | 0.5 | FALSE |
| Brain | RT1-T24-4 | intron excision ratio | chr20_2688990_2690922 | 0.16 | 4 | 0.03 | 1.2e-03 | -5.35 | 8.87e-08 | 0.54 | FALSE |
| Brain | RT1-T24-4 | intron excision ratio | chr20_2694069_2724607 | 0.58 | 17 | 0.19 | 1.9e-17 | 5.23 | 1.71e-07 | 0 | FALSE |
| Brain | RT1-T24-4 | intron excision ratio | chr20_2773698_2774009 | 0.07 | 1 | 0.03 | 6.5e-04 | 5.63 | 1.75e-08 | 0.03 | FALSE |
| Brain | Abcf1 | mRNA stability | Abcf1 | 0.11 | 1268 | 0.1 | 1.9e-09 | -5.56 | 2.67e-08 | 0.62 | FALSE |
| Brain | Atat1 | mRNA stability | Atat1 | 0.06 | 1296 | 0.06 | 7.2e-06 | -5.65 | 1.56e-08 | 0.68 | FALSE |
| Brain | Cchcr1 | mRNA stability | Cchcr1 | 0.34 | 1 | 0.39 | 7.3e-38 | 5.75 | 9.00e-09 | 0.75 | FALSE |
| Brain | Ddr1 | mRNA stability | Ddr1 | 0.07 | 1315 | 0.04 | 1.7e-04 | 5.47 | 4.58e-08 | 0.71 | FALSE |
| Brain | Dhx16 | mRNA stability | Dhx16 | 0.51 | 20 | 0.66 | 3.4e-81 | 5.79 | 6.92e-09 | 0.72 | FALSE |
| Brain | Nfkbil1 | mRNA stability | Nfkbil1 | 0.12 | 29 | 0.15 | 7.3e-14 | 5.2 | 1.94e-07 | 0.05 | FALSE |
| Brain | Prrc2a | mRNA stability | Prrc2a | 0.23 | 104 | 0.27 | 1.9e-25 | -5.31 | 1.11e-07 | 0.2 | FALSE |
| Eye | LOC120093125 | alternative polyA | XM_039099256.1 | 0.36 | 948 | 0.11 | 1.1e-02 | 5.54 | 3.05e-08 | 0.33 | FALSE |
| Eye | LOC120093125 | alternative polyA | XM_039099257.1 | 0.39 | 948 | 0.11 | 1.1e-02 | -5.85 | 4.92e-09 | 0.38 | FALSE |
| Eye | LOC120093125 | alternative polyA | XM_039099255.1 | 0.29 | 1 | 0.05 | 6.6e-02 | -5.66 | 1.51e-08 | 0.06 | FALSE |
| Eye | LOC120093125 | alternative polyA | XM_039099257.1 | 0.3 | 948 | 0.07 | 3.5e-02 | -5.83 | 5.62e-09 | 0.3 | FALSE |
| Eye | RT1-N2 | gene expression | RT1-N2 | 0.67 | 999 | 0.23 | 1.9e-04 | 5.63 | 1.85e-08 | 0.51 | FALSE |
| Eye | RT1-O1 | gene expression | RT1-O1 | 0.46 | 44 | 0.17 | 1.3e-03 | -5.34 | 9.54e-08 | 0.35 | FALSE |
| Eye | Abhd16a | isoform ratio | XM_039098804.1 | 0.44 | 1 | 0.21 | 3.6e-04 | -5.18 | 2.26e-07 | 0.06 | FALSE |
| Eye | Atat1 | isoform ratio | XR_005497275.1 | 0.36 | 2 | 0.05 | 6.3e-02 | 5.83 | 5.42e-09 | 0.29 | FALSE |
| Eye | LOC120093125 | isoform ratio | XM_039099257.1 | 0.51 | 948 | 0.18 | 1.1e-03 | -5.84 | 5.07e-09 | 0.47 | FALSE |
| Eye | RT1-N3 | isoform ratio | XM_039098420.1 | 0.36 | 1 | 0.13 | 4.9e-03 | -5.6 | 2.15e-08 | 0.31 | FALSE |
| Eye | Bag6 | intron excision ratio | chr20_3684338_3684793 | 0.47 | 9 | 0.05 | 6.2e-02 | 5.55 | 2.85e-08 | 0.11 | FALSE |
| Eye | LOC120093125 | intron excision ratio | chr20_2626584_2657802 | 0.49 | 8 | 0.17 | 1.6e-03 | -5.89 | 3.80e-09 | 0.26 | FALSE |
| Eye | RT1-CE13 | intron excision ratio | chr20_3317762_3317965 | 0.72 | 2580 | -0.01 | 5.8e-01 | -5.28 | 1.27e-07 | 0.07 | FALSE |
| IL | LOC120093125 | alternative polyA | XM_039099255.1 | 0.4 | 948 | 0.17 | 6.9e-05 | 5.28 | 1.29e-07 | 0.7 | FALSE |
| IL | LOC120093125 | alternative polyA | XM_039099256.1 | 0.69 | 282 | 0.23 | 2.7e-06 | -5.28 | 1.29e-07 | 0.34 | FALSE |
| IL | LOC120093125 | alternative polyA | XM_039099257.1 | 0.15 | 101 | 0.09 | 3.5e-03 | 5.71 | 1.11e-08 | 0.5 | FALSE |
| IL | LOC120093125 | alternative polyA | XM_039099255.1 | 0.23 | 252 | 0.15 | 2.0e-04 | -5.83 | 5.42e-09 | 0.54 | FALSE |
| IL | LOC120093125 | alternative polyA | XM_039099257.1 | 0.27 | 948 | 0.15 | 1.6e-04 | -5.68 | 1.37e-08 | 0.7 | FALSE |
| IL | RT1-N2 | alternative polyA | XM_017601671.2 | 0.36 | 999 | 0.25 | 1.3e-06 | 5.83 | 5.66e-09 | 0.71 | FALSE |
| IL | RT1-N2 | alternative polyA | NM_001008854.2 | 0.23 | 7 | 0.1 | 2.8e-03 | -5.74 | 9.49e-09 | 0.62 | FALSE |
| IL | RT1-N2 | alternative polyA | XM_039098786.1 | 0.24 | 10 | 0.13 | 4.9e-04 | -5.62 | 1.91e-08 | 0.63 | FALSE |
| IL | RT1-N2 | alternative TSS | NM_001008854.2 | 0.47 | 7 | 0.22 | 4.1e-06 | 5.95 | 2.72e-09 | 0.66 | FALSE |
| IL | RT1-N3 | alternative TSS | NM_001008855.2 | 0.13 | 1 | 0.05 | 2.3e-02 | -5.64 | 1.66e-08 | 0.05 | FALSE |
| IL | Abcf1 | gene expression | Abcf1 | 0.31 | 1268 | 0.14 | 3.6e-04 | -5.78 | 7.42e-09 | 0.62 | FALSE |
| IL | Dhx16 | gene expression | Dhx16 | 0.75 | 8 | 0.18 | 3.6e-05 | -5.67 | 1.46e-08 | 0.61 | FALSE |
| IL | LOC120093125 | gene expression | LOC120093125 | 0.66 | 15 | 0.49 | 2.2e-13 | -5.93 | 3.01e-09 | 0.76 | FALSE |
| IL | RT1-N2 | gene expression | RT1-N2 | 0.7 | 999 | 0.48 | 3.6e-13 | 5.67 | 1.42e-08 | 0.69 | FALSE |
| IL | RT1-O1 | gene expression | RT1-O1 | 0.69 | 5 | 0.32 | 2.0e-08 | 5.84 | 5.07e-09 | 0.71 | FALSE |
| IL | RT1-S2 | gene expression | RT1-S2 | 0.46 | 22 | 0.5 | 8.7e-14 | 5.83 | 5.52e-09 | 0.72 | FALSE |
| IL | RT1-T18 | gene expression | RT1-T18 | 0.43 | 921 | 0.22 | 4.5e-06 | -5.72 | 1.04e-08 | 0.74 | FALSE |
| IL | RT1-T24-2 | gene expression | RT1-T24-2 | 0.17 | 1 | 0.06 | 1.3e-02 | 5.76 | 8.35e-09 | 0.06 | FALSE |
| IL | LOC120093125 | isoform ratio | XM_039099256.1 | 0.38 | 948 | 0.23 | 3.9e-06 | 5.68 | 1.35e-08 | 0.67 | FALSE |
| IL | LOC120093125 | isoform ratio | XM_039099257.1 | 0.31 | 948 | 0.21 | 7.1e-06 | -5.31 | 1.08e-07 | 0.71 | FALSE |
| IL | RT1-N2 | isoform ratio | XM_039098783.1 | 0.45 | 1 | 0.24 | 1.4e-06 | -5.64 | 1.66e-08 | 0.3 | FALSE |
| IL | RT1-N2 | isoform ratio | XM_039098785.1 | 0.68 | 17 | 0.32 | 1.4e-08 | -5.85 | 4.92e-09 | 0.73 | FALSE |
| IL | RT1-N2 | isoform ratio | XM_039098786.1 | 0.64 | 10 | 0.36 | 1.2e-09 | 5.5 | 3.70e-08 | 0.74 | FALSE |
| IL | RT1-CE15 | intron excision ratio | chr20_3356537_3357504 | 0.14 | 1 | 0.07 | 1.1e-02 | -5.24 | 1.63e-07 | 0.05 | FALSE |
| IL | RT1-CE16 | intron excision ratio | chr20_3356537_3357504 | 0.14 | 1 | 0.03 | 7.9e-02 | -5.23 | 1.70e-07 | 0.05 | FALSE |
| IL | RT1-T24-4 | intron excision ratio | chr20_2691672_2691881 | 0.32 | 1174 | 0.12 | 7.8e-04 | 5.48 | 4.28e-08 | 0.51 | FALSE |
| IL | RT1-T24-4 | intron excision ratio | chr20_2691928_2692062 | 0.52 | 8 | 0.21 | 6.9e-06 | -5.63 | 1.84e-08 | 0.43 | FALSE |
| IL | Dhx16 | mRNA stability | Dhx16 | 0.52 | 212 | 0.33 | 7.5e-09 | -5.8 | 6.51e-09 | 0.7 | FALSE |
| LHb | Dhx16 | alternative polyA | NM_212496.2 | 0.37 | 1315 | 0.22 | 6.4e-06 | 5.6 | 2.11e-08 | 0.68 | FALSE |
| LHb | Dhx16 | alternative polyA | XM_039098480.1 | 0.41 | 1315 | 0.23 | 3.5e-06 | -5.57 | 2.54e-08 | 0.69 | FALSE |
| LHb | Dhx16 | alternative polyA | NM_212496.2 | 0.31 | 1 | 0.15 | 1.7e-04 | -5.81 | 6.14e-09 | 0.15 | FALSE |
| LHb | Dhx16 | alternative polyA | XM_039098480.1 | 0.39 | 1315 | 0.21 | 1.3e-05 | -5.51 | 3.66e-08 | 0.68 | FALSE |
| LHb | LOC120098967 | alternative polyA | XR_005497790.1 | 0.25 | 1258 | 0.16 | 1.2e-04 | -5.8 | 6.62e-09 | 0.6 | FALSE |
| LHb | LOC120098967 | alternative polyA | XR_005497791.1 | 0.23 | 1258 | 0.15 | 2.6e-04 | 5.8 | 6.67e-09 | 0.58 | FALSE |
| LHb | RT1-N2 | alternative polyA | XM_017601671.2 | 0.37 | 999 | 0.27 | 4.0e-07 | 5.76 | 8.61e-09 | 0.67 | FALSE |
| LHb | RT1-N2 | alternative polyA | XM_039098786.1 | 0.25 | 26 | 0.18 | 5.3e-05 | 5.82 | 5.99e-09 | 0.62 | FALSE |
| LHb | RT1-N2 | alternative polyA | NM_001008854.2 | 0.16 | 1 | 0.09 | 3.5e-03 | 5.77 | 7.87e-09 | 0.07 | FALSE |
| LHb | RT1-N2 | alternative polyA | XM_039098786.1 | 0.17 | 1 | 0.12 | 1.0e-03 | -5.77 | 7.87e-09 | 0.08 | FALSE |
| LHb | RT1-N2 | alternative TSS | NM_001008854.2 | 0.26 | 3 | 0.17 | 7.8e-05 | -5.74 | 9.74e-09 | 0.56 | FALSE |
| LHb | RT1-N3 | alternative TSS | NM_001008855.2 | 0.21 | 1 | 0.14 | 2.8e-04 | -5.62 | 1.88e-08 | 0.06 | FALSE |
| LHb | Abcf1 | gene expression | Abcf1 | 0.4 | 1268 | 0.32 | 2.6e-08 | -5.39 | 7.12e-08 | 0.54 | FALSE |
| LHb | Cchcr1 | gene expression | Cchcr1 | 0.61 | 29 | 0.41 | 7.6e-11 | 5.39 | 7.22e-08 | 0.73 | FALSE |
| LHb | Dhx16 | gene expression | Dhx16 | 0.38 | 24 | 0.3 | 8.8e-08 | 5.65 | 1.62e-08 | 0.59 | FALSE |
| LHb | LOC120093125 | gene expression | LOC120093125 | 0.75 | 197 | 0.55 | 9.9e-16 | 5.77 | 7.83e-09 | 0.7 | FALSE |
| LHb | LOC120098966 | gene expression | LOC120098966 | 0.5 | 1171 | 0.33 | 9.4e-09 | 5.22 | 1.82e-07 | 0.52 | FALSE |
| LHb | Mdc1 | gene expression | Mdc1 | 0.21 | 20 | 0.03 | 5.5e-02 | 5.49 | 4.01e-08 | 0.48 | FALSE |
| LHb | RT1-CE4 | gene expression | RT1-CE4 | 0.4 | 1 | 0.28 | 2.1e-07 | -5.3 | 1.13e-07 | 0.07 | FALSE |
| LHb | RT1-N2 | gene expression | RT1-N2 | 0.75 | 10 | 0.58 | 9.7e-17 | 5.78 | 7.45e-09 | 0.59 | FALSE |
| LHb | RT1-O1 | gene expression | RT1-O1 | 0.61 | 192 | 0.45 | 3.2e-12 | -5.3 | 1.16e-07 | 0.55 | FALSE |
| LHb | RT1-S2 | gene expression | RT1-S2 | 0.76 | 17 | 0.53 | 5.6e-15 | 5.72 | 1.07e-08 | 0.68 | FALSE |
| LHb | RT1-S3 | gene expression | RT1-S3 | 0.39 | 6 | 0.33 | 1.1e-08 | -5.77 | 7.89e-09 | 0.62 | FALSE |
| LHb | RT1-T18 | gene expression | RT1-T18 | 0.22 | 9 | 0.22 | 6.3e-06 | 5.79 | 6.84e-09 | 0.58 | FALSE |
| LHb | RT1-T24-2 | gene expression | RT1-T24-2 | 0.18 | 1239 | 0.11 | 1.6e-03 | -5.83 | 5.59e-09 | 0.49 | FALSE |
| LHb | Dhx16 | isoform ratio | XM_039098480.1 | 0.34 | 1315 | 0.18 | 5.0e-05 | -5.64 | 1.67e-08 | 0.66 | FALSE |
| LHb | LOC120093125 | isoform ratio | XM_039099256.1 | 0.3 | 948 | 0.17 | 9.3e-05 | 5.79 | 7.01e-09 | 0.65 | FALSE |
| LHb | LOC120093125 | isoform ratio | XM_039099257.1 | 0.34 | 14 | 0.21 | 1.0e-05 | 5.88 | 4.00e-09 | 0.66 | FALSE |
| LHb | LOC120098967 | isoform ratio | XR_005497790.1 | 0.4 | 1258 | 0.26 | 5.7e-07 | -5.61 | 2.06e-08 | 0.59 | FALSE |
| LHb | LOC120098967 | isoform ratio | XR_005497791.1 | 0.38 | 1258 | 0.26 | 8.7e-07 | 5.63 | 1.80e-08 | 0.6 | FALSE |
| LHb | RT1-CE3 | isoform ratio | XM_039098967.1 | 0.55 | 192 | 0.49 | 2.3e-13 | 5.2 | 1.96e-07 | 0.05 | FALSE |
| LHb | RT1-CE5 | isoform ratio | XM_039098660.1 | 0.17 | 4 | 0.11 | 1.4e-03 | -5.19 | 2.14e-07 | 0.04 | FALSE |
| LHb | RT1-N2 | isoform ratio | XM_039098783.1 | 0.47 | 97 | 0.41 | 6.7e-11 | -5.47 | 4.54e-08 | 0.71 | FALSE |
| LHb | RT1-N2 | isoform ratio | XM_039098785.1 | 0.54 | 12 | 0.35 | 3.1e-09 | -5.75 | 9.04e-09 | 0.7 | FALSE |
| LHb | RT1-N2 | isoform ratio | XM_039098786.1 | 0.38 | 6 | 0.29 | 1.4e-07 | 5.76 | 8.63e-09 | 0.65 | FALSE |
| LHb | LOC120093125 | intron excision ratio | chr20_2626206_2626386 | 0.3 | 1 | 0.15 | 2.4e-04 | -5.83 | 5.39e-09 | 0.63 | FALSE |
| LHb | LOC120093125 | intron excision ratio | chr20_2651275_2651455 | 0.23 | 948 | 0.12 | 1.1e-03 | -5.43 | 5.78e-08 | 0.48 | FALSE |
| LHb | LOC120093125 | intron excision ratio | chr20_2672840_2673017 | 0.35 | 4 | 0.17 | 8.5e-05 | 5.78 | 7.41e-09 | 0.66 | FALSE |
| LHb | RT1-S2 | intron excision ratio | chr20_2626206_2626386 | 0.3 | 1 | 0.15 | 2.1e-04 | -5.83 | 5.39e-09 | 0.61 | FALSE |
| LHb | RT1-S2 | intron excision ratio | chr20_2651275_2651455 | 0.23 | 1016 | 0.12 | 1.1e-03 | -5.42 | 5.91e-08 | 0.47 | FALSE |
| LHb | RT1-S2 | intron excision ratio | chr20_2672840_2673017 | 0.35 | 4 | 0.17 | 9.0e-05 | 5.78 | 7.50e-09 | 0.64 | FALSE |
| LHb | RT1-S3 | intron excision ratio | chr20_2626206_2626386 | 0.31 | 1 | 0.15 | 2.4e-04 | -5.83 | 5.39e-09 | 0.61 | FALSE |
| LHb | RT1-S3 | intron excision ratio | chr20_2651275_2651455 | 0.24 | 1120 | 0.11 | 1.2e-03 | -5.43 | 5.77e-08 | 0.47 | FALSE |
| LHb | RT1-S3 | intron excision ratio | chr20_2672840_2673017 | 0.36 | 4 | 0.17 | 9.4e-05 | 5.78 | 7.55e-09 | 0.64 | FALSE |
| LHb | Dhx16 | mRNA stability | Dhx16 | 0.62 | 12 | 0.33 | 1.6e-08 | 5.72 | 1.05e-08 | 0.72 | FALSE |
| Liver | Dhx16 | alternative polyA | NM_212496.2 | 0.06 | 1269 | 0.01 | 2.1e-02 | 5.67 | 1.45e-08 | 0.54 | FALSE |
| Liver | Dhx16 | alternative polyA | XM_039098480.1 | 0.08 | 1 | 0.04 | 9.0e-05 | 5.75 | 9.11e-09 | 0.28 | FALSE |
| Liver | Dhx16 | alternative polyA | NM_212496.2 | 0.05 | 1 | 0 | 2.0e-01 | -5.34 | 9.19e-08 | 0.03 | FALSE |
| Liver | Dhx16 | alternative polyA | XM_039098480.1 | 0.08 | 1 | 0.03 | 1.6e-04 | 5.75 | 9.11e-09 | 0.23 | FALSE |
| Liver | LOC120093125 | alternative polyA | XM_039099255.1 | 0.38 | 17 | 0.15 | 3.0e-16 | 5.29 | 1.24e-07 | 0.77 | FALSE |
| Liver | LOC120093125 | alternative polyA | XM_039099257.1 | 0.47 | 26 | 0.22 | 4.3e-24 | -5.39 | 7.20e-08 | 0.78 | FALSE |
| Liver | LOC120093125 | alternative polyA | XM_039099255.1 | 0.35 | 19 | 0.18 | 4.6e-19 | 5.42 | 5.95e-08 | 0.77 | FALSE |
| Liver | LOC120093125 | alternative polyA | XM_039099257.1 | 0.41 | 160 | 0.19 | 6.2e-21 | 5.3 | 1.13e-07 | 0.77 | FALSE |
| Liver | RT1-N2 | alternative polyA | NM_001008854.2 | 0.12 | 1 | 0.06 | 8.6e-07 | 5.6 | 2.15e-08 | 0.52 | FALSE |
| Liver | Dhx16 | alternative TSS | XM_039098484.1 | 0.07 | 9 | 0.05 | 2.2e-06 | 5.83 | 5.52e-09 | 0.75 | FALSE |
| Liver | Lst1 | alternative TSS | NM_022634.2 | 0.09 | 1 | 0.12 | 1.1e-13 | 5.25 | 1.50e-07 | 0.54 | FALSE |
| Liver | Lst1 | alternative TSS | XM_006256080.4 | 0.09 | 1 | 0.13 | 8.3e-14 | -5.25 | 1.50e-07 | 0.54 | FALSE |
| Liver | Prr3 | alternative TSS | XM_006255942.3 | 0.04 | 6 | 0.03 | 4.9e-04 | -5.86 | 4.54e-09 | 0.71 | FALSE |
| Liver | Prr3 | alternative TSS | XM_006255942.3 | 0.03 | 6 | 0.03 | 4.7e-04 | -5.88 | 4.08e-09 | 0.7 | FALSE |
| Liver | RT1-N2 | alternative TSS | NM_001008854.2 | 0.28 | 14 | 0.28 | 1.3e-30 | 5.73 | 9.77e-09 | 0.76 | FALSE |
| Liver | RT1-N2 | alternative TSS | XM_039098786.1 | 0.32 | 954 | 0.32 | 1.1e-35 | 5.82 | 5.83e-09 | 0.76 | FALSE |
| Liver | RT1-N3 | alternative TSS | XM_039098420.1 | 0.53 | 87 | 0.58 | 5.7e-80 | 5.68 | 1.32e-08 | 0.76 | FALSE |
| Liver | RT1-N3 | alternative TSS | XM_039098421.1 | 0.58 | 19 | 0.57 | 3.2e-77 | 5.61 | 2.06e-08 | 0.01 | FALSE |
| Liver | RT1-N3 | alternative TSS | XM_039098420.1 | 0.7 | 108 | 0.66 | 5.5e-99 | 5.67 | 1.45e-08 | 0.76 | FALSE |
| Liver | Abcf1 | gene expression | Abcf1 | 0.14 | 1223 | 0.11 | 3.3e-12 | 5.3 | 1.13e-07 | 0.74 | FALSE |
| Liver | Dhx16 | gene expression | Dhx16 | 0.19 | 1 | 0.13 | 1.7e-14 | 5.8 | 6.48e-09 | 0.8 | FALSE |
| Liver | LOC102553445 | gene expression | LOC102553445 | 0.46 | 26 | 0.44 | 1.6e-53 | 5.25 | 1.52e-07 | 0.74 | FALSE |
| Liver | LOC120093125 | gene expression | LOC120093125 | 0.69 | 1 | 0.67 | 1.7e-99 | 5.81 | 6.41e-09 | 0.83 | FALSE |
| Liver | RT1-N2 | gene expression | RT1-N2 | 0.66 | 26 | 0.67 | 2.0e-99 | -5.62 | 1.95e-08 | 0.76 | FALSE |
| Liver | Abcf1 | isoform ratio | NM_001109883.2 | 0.05 | 1223 | 0.04 | 3.5e-05 | 5.56 | 2.66e-08 | 0.73 | FALSE |
| Liver | Abcf1 | isoform ratio | XM_017601783.2 | 0.06 | 1223 | 0.05 | 3.4e-06 | -5.46 | 4.76e-08 | 0.74 | FALSE |
| Liver | Dhx16 | isoform ratio | XM_039098480.1 | 0.17 | 1269 | 0.17 | 4.0e-18 | -5.37 | 7.90e-08 | 0.56 | FALSE |
| Liver | LOC120093125 | isoform ratio | XM_039099255.1 | 0.84 | 145 | 0.3 | 3.6e-33 | -5.64 | 1.68e-08 | 0.76 | FALSE |
| Liver | LOC120093125 | isoform ratio | XM_039099256.1 | 0.18 | 903 | 0.17 | 1.8e-18 | 5.74 | 9.20e-09 | 0.77 | FALSE |
| Liver | LOC120093125 | isoform ratio | XM_039099257.1 | 0.49 | 26 | 0.47 | 1.1e-57 | -5.85 | 4.92e-09 | 0.78 | FALSE |
| Liver | Prr3 | isoform ratio | XM_006255942.3 | 0.02 | 20 | 0.02 | 3.9e-03 | 5.58 | 2.41e-08 | 0.53 | FALSE |
| Liver | Prrc2a | isoform ratio | XM_006256051.4 | 0.05 | 1 | 0.04 | 1.6e-05 | 5.26 | 1.48e-07 | 0.69 | FALSE |
| Liver | RT1-N2 | isoform ratio | XM_006255938.4 | 0.36 | 4 | 0.36 | 3.0e-41 | 5.42 | 5.80e-08 | 0.74 | FALSE |
| Liver | RT1-N2 | isoform ratio | XM_017601671.2 | 0.42 | 4 | 0.32 | 6.8e-36 | 5.64 | 1.68e-08 | 0.76 | FALSE |
| Liver | RT1-N2 | isoform ratio | XM_039098783.1 | 0.3 | 34 | 0.29 | 2.4e-32 | 5.42 | 5.82e-08 | 0.76 | FALSE |
| Liver | RT1-N2 | isoform ratio | XM_039098785.1 | 0.84 | 1 | 0.46 | 4.4e-56 | 5.8 | 6.48e-09 | 0.81 | FALSE |
| Liver | RT1-N3 | isoform ratio | NM_001008855.2 | 0.33 | 7 | 0.32 | 4.2e-36 | 5.73 | 9.79e-09 | 0.75 | FALSE |
| Liver | RT1-N3 | isoform ratio | XM_039098420.1 | 0.47 | 40 | 0.53 | 1.8e-69 | -5.78 | 7.56e-09 | 0.76 | FALSE |
| Liver | RT1-T24-4 | intron excision ratio | chr20_2741803_2741939 | 0.19 | 1129 | 0.03 | 7.2e-04 | -5.4 | 6.56e-08 | 0.69 | FALSE |
| Liver | Dhx16 | mRNA stability | Dhx16 | 0.29 | 13 | 0.28 | 3.0e-31 | -5.79 | 7.20e-09 | 0.74 | FALSE |
| Liver | LOC120093125 | mRNA stability | LOC120093125 | 0.16 | 1 | 0.15 | 2.9e-16 | 5.6 | 2.15e-08 | 0.6 | FALSE |
| Liver | Prr3 | mRNA stability | Prr3 | 0.04 | 1 | 0.03 | 1.0e-04 | -5.78 | 7.32e-09 | 0.43 | FALSE |
| NAcc | Dhx16 | alternative polyA | XM_039098480.1 | 0.12 | 19 | 0.13 | 4.6e-15 | -5.89 | 3.75e-09 | 0.73 | FALSE |
| NAcc | Dhx16 | alternative polyA | XM_039098480.1 | 0.15 | 1 | 0.16 | 3.1e-18 | 5.82 | 5.92e-09 | 0.8 | FALSE |
| NAcc | Dhx16 | alternative polyA | XM_039098481.1 | 0.14 | 1315 | 0.06 | 5.3e-08 | 5.69 | 1.28e-08 | 0.73 | FALSE |
| NAcc | LOC120093125 | alternative polyA | XM_039099255.1 | 0.26 | 21 | 0.3 | 5.5e-35 | -5.86 | 4.68e-09 | 0.78 | FALSE |
| NAcc | LOC120093125 | alternative polyA | XM_039099256.1 | 0.05 | 1 | 0.05 | 1.8e-06 | -5.66 | 1.48e-08 | 0.58 | FALSE |
| NAcc | LOC120093125 | alternative polyA | XM_039099257.1 | 0.48 | 43 | 0.36 | 4.6e-43 | 5.4 | 6.61e-08 | 0.81 | FALSE |
| NAcc | LOC120093125 | alternative polyA | XM_039099255.1 | 0.32 | 1 | 0.31 | 5.7e-36 | -5.82 | 5.78e-09 | 0.83 | FALSE |
| NAcc | LOC120093125 | alternative polyA | XM_039099257.1 | 0.47 | 50 | 0.38 | 6.1e-47 | 5.27 | 1.39e-07 | 0.81 | TRUE |
| NAcc | LOC120098967 | alternative polyA | XR_005497790.1 | 0.18 | 4 | 0.16 | 8.8e-18 | -5.82 | 6.04e-09 | 0.74 | FALSE |
| NAcc | LOC120098967 | alternative polyA | XR_005497791.1 | 0.18 | 1 | 0.16 | 5.2e-18 | -5.83 | 5.39e-09 | 0.81 | FALSE |
| NAcc | RT1-CE5 | alternative polyA | XM_039098672.1 | 0.33 | 21 | 0.24 | 5.9e-28 | 5.38 | 7.58e-08 | 0.16 | FALSE |
| NAcc | RT1-N2 | alternative polyA | XM_017601671.2 | 0.24 | 18 | 0.24 | 1.7e-27 | -5.28 | 1.30e-07 | 0.71 | FALSE |
| NAcc | RT1-N2 | alternative polyA | XM_039098786.1 | 0.53 | 112 | 0.32 | 6.2e-38 | -5.74 | 9.45e-09 | 0.73 | FALSE |
| NAcc | Ddr1 | alternative TSS | XM_017601562.2 | 0.02 | 1 | 0.02 | 1.8e-03 | -5.77 | 7.70e-09 | 0.13 | FALSE |
| NAcc | Prr3 | alternative TSS | XM_006255942.3 | 0.02 | 1262 | 0.01 | 1.8e-02 | 5.63 | 1.81e-08 | 0.53 | FALSE |
| NAcc | RT1-N3 | alternative TSS | XM_039098420.1 | 0.19 | 32 | 0.17 | 1.4e-19 | -5.74 | 9.72e-09 | 0.74 | FALSE |
| NAcc | RT1-N3 | alternative TSS | NM_001008855.2 | 0.22 | 19 | 0.23 | 7.5e-27 | 5.71 | 1.15e-08 | 0.73 | FALSE |
| NAcc | RT1-N3 | alternative TSS | XM_039098420.1 | 0.34 | 31 | 0.32 | 1.8e-38 | -5.88 | 4.07e-09 | 0.73 | FALSE |
| NAcc | RT1-N3 | alternative TSS | XM_039098421.1 | 0.08 | 40 | 0.07 | 9.0e-09 | 5.63 | 1.80e-08 | 0.74 | FALSE |
| NAcc | Abcf1 | gene expression | Abcf1 | 0.23 | 10 | 0.22 | 1.5e-25 | 5.63 | 1.80e-08 | 0.67 | FALSE |
| NAcc | Atat1 | gene expression | Atat1 | 0.28 | 22 | 0.24 | 3.3e-27 | 5.69 | 1.28e-08 | 0.6 | FALSE |
| NAcc | Cchcr1 | gene expression | Cchcr1 | 0.6 | 13 | 0.64 | 1.1e-97 | 5.7 | 1.22e-08 | 0.74 | FALSE |
| NAcc | Ddr1 | gene expression | Ddr1 | 0.14 | 64 | 0.14 | 1.8e-16 | -6.06 | 1.34e-09 | 0.72 | FALSE |
| NAcc | Dhx16 | gene expression | Dhx16 | 0.65 | 1 | 0.08 | 9.6e-10 | 5.6 | 2.15e-08 | 0.53 | FALSE |
| NAcc | Gtf2h4 | gene expression | Gtf2h4 | 0.09 | 1 | 0.12 | 8.5e-14 | -5.56 | 2.66e-08 | 0.48 | FALSE |
| NAcc | LOC120093125 | gene expression | LOC120093125 | 0.61 | 26 | 0.77 | 4.2e-138 | -5.79 | 7.11e-09 | 0.77 | FALSE |
| NAcc | LOC120098966 | gene expression | LOC120098966 | 0.12 | 14 | 0.11 | 3.4e-13 | 5.67 | 1.47e-08 | 0.7 | FALSE |
| NAcc | RT1-N2 | gene expression | RT1-N2 | 0.61 | 87 | 0.76 | 2.7e-136 | -5.69 | 1.30e-08 | 0.74 | FALSE |
| NAcc | RT1-O1 | gene expression | RT1-O1 | 0.45 | 51 | 0.65 | 2.3e-100 | 5.83 | 5.49e-09 | 0.75 | FALSE |
| NAcc | RT1-S2 | gene expression | RT1-S2 | 0.56 | 64 | 0.69 | 2.8e-112 | -5.54 | 2.97e-08 | 0.74 | FALSE |
| NAcc | RT1-S3 | gene expression | RT1-S3 | 0.54 | 8 | 0.33 | 2.0e-39 | 5.33 | 9.91e-08 | 0.72 | FALSE |
| NAcc | RT1-T18 | gene expression | RT1-T18 | 0.27 | 38 | 0.37 | 8.6e-45 | 5.92 | 3.20e-09 | 0.76 | FALSE |
| NAcc | Abcf1 | isoform ratio | NM_001109883.2 | 0.14 | 1268 | 0.12 | 4.3e-14 | 5.46 | 4.64e-08 | 0.64 | FALSE |
| NAcc | Abcf1 | isoform ratio | XM_017601783.2 | 0.14 | 1268 | 0.12 | 8.2e-14 | -5.43 | 5.79e-08 | 0.62 | FALSE |
| NAcc | Dhx16 | isoform ratio | NM_212496.2 | 0.06 | 1 | 0.06 | 7.4e-08 | -5.77 | 8.02e-09 | 0.74 | FALSE |
| NAcc | Dhx16 | isoform ratio | XM_039098480.1 | 0.11 | 13 | 0.13 | 7.9e-15 | -5.87 | 4.41e-09 | 0.73 | FALSE |
| NAcc | LOC120093125 | isoform ratio | XM_039099255.1 | 0.18 | 13 | 0.19 | 5.2e-22 | 5.48 | 4.35e-08 | 0.66 | FALSE |
| NAcc | LOC120093125 | isoform ratio | XM_039099256.1 | 0.05 | 948 | 0.05 | 1.5e-06 | 5.2 | 1.96e-07 | 0.53 | FALSE |
| NAcc | LOC120093125 | isoform ratio | XM_039099257.1 | 0.45 | 19 | 0.43 | 8.0e-54 | -5.91 | 3.49e-09 | 0.79 | FALSE |
| NAcc | LOC120098967 | isoform ratio | XR_005497791.1 | 0.19 | 1258 | 0.17 | 1.0e-18 | 5.32 | 1.07e-07 | 0.45 | FALSE |
| NAcc | RT1-N2 | isoform ratio | XM_039098783.1 | 0.25 | 19 | 0.33 | 3.4e-39 | 5.7 | 1.21e-08 | 0.73 | FALSE |
| NAcc | RT1-N2 | isoform ratio | XM_039098786.1 | 0.44 | 14 | 0.34 | 2.3e-40 | 5.56 | 2.67e-08 | 0.74 | FALSE |
| NAcc | RT1-N3 | isoform ratio | XM_039098420.1 | 0.27 | 17 | 0.24 | 2.7e-27 | -5.45 | 4.95e-08 | 0.74 | FALSE |
| NAcc | Abcf1 | intron excision ratio | chr20_2802656_2806896 | 0.09 | 1268 | 0.08 | 3.4e-09 | 5.67 | 1.44e-08 | 0.72 | FALSE |
| NAcc | Abcf1 | intron excision ratio | chr20_2802656_2807786 | 0.35 | 1 | 0.23 | 2.9e-26 | 5.77 | 7.98e-09 | 0.75 | FALSE |
| NAcc | Abcf1 | intron excision ratio | chr20_2806942_2807786 | 0.13 | 1268 | 0.09 | 1.7e-10 | 5.3 | 1.15e-07 | 0.54 | FALSE |
| NAcc | Dhx16 | intron excision ratio | chr20_2863558_2864697 | 0.05 | 5 | 0.04 | 5.2e-05 | -5.64 | 1.66e-08 | 0.62 | FALSE |
| NAcc | Dhx16 | intron excision ratio | chr20_2863589_2864697 | 0.15 | 10 | 0.11 | 9.3e-13 | 5.54 | 2.97e-08 | 0.57 | FALSE |
| NAcc | RT1-CE1 | intron excision ratio | chr20_3539155_3539332 | 0.23 | 33 | 0.22 | 1.7e-24 | 5.27 | 1.35e-07 | 0.06 | FALSE |
| NAcc | RT1-CE2 | intron excision ratio | chr20_3539155_3539332 | 0.22 | 22 | 0.22 | 1.7e-24 | 5.28 | 1.29e-07 | 0.06 | FALSE |
| NAcc | RT1-CE3 | intron excision ratio | chr20_3539155_3539332 | 0.21 | 27 | 0.22 | 1.7e-24 | 5.28 | 1.30e-07 | 0.05 | FALSE |
| NAcc | RT1-T24-3 | intron excision ratio | chr20_2684649_2688694 | 0.15 | 33 | 0.15 | 1.8e-17 | 5.19 | 2.16e-07 | 0.03 | FALSE |
| NAcc | RT1-T24-3 | intron excision ratio | chr20_2688990_2690922 | 0.07 | 10 | 0.07 | 1.7e-08 | 5.41 | 6.33e-08 | 0.68 | FALSE |
| NAcc | RT1-T24-3 | intron excision ratio | chr20_2694312_2725194 | 0.14 | 38 | 0.12 | 6.2e-14 | -5.46 | 4.78e-08 | 0.09 | FALSE |
| NAcc | RT1-T24-4 | intron excision ratio | chr20_2684649_2688694 | 0.15 | 33 | 0.15 | 1.8e-17 | 5.18 | 2.23e-07 | 0.03 | FALSE |
| NAcc | RT1-T24-4 | intron excision ratio | chr20_2688990_2690922 | 0.07 | 10 | 0.07 | 1.7e-08 | 5.41 | 6.33e-08 | 0.69 | FALSE |
| NAcc | RT1-T24-4 | intron excision ratio | chr20_2691465_2691643 | 0.03 | 7 | 0.04 | 2.5e-05 | 5.66 | 1.52e-08 | 0.6 | FALSE |
| NAcc | RT1-T24-4 | intron excision ratio | chr20_2691928_2692062 | 0.28 | 1174 | 0.31 | 2.7e-36 | -5.2 | 1.97e-07 | 0.12 | FALSE |
| NAcc | RT1-T24-4 | intron excision ratio | chr20_2741359_2741537 | 0.04 | 13 | 0.03 | 8.2e-05 | -5.86 | 4.60e-09 | 0.73 | FALSE |
| NAcc | RT1-T24-4 | intron excision ratio | chr20_2741569_2741756 | 0.11 | 1 | 0.08 | 1.7e-09 | -5.82 | 5.78e-09 | 0.81 | FALSE |
| NAcc | Dhx16 | mRNA stability | Dhx16 | 0.21 | 43 | 0.29 | 1.4e-33 | 5.76 | 8.46e-09 | 0.73 | FALSE |
| OFC | Dhx16 | alternative polyA | NM_212496.2 | 0.24 | 1 | 0.18 | 3.8e-05 | -5.64 | 1.66e-08 | 0.08 | FALSE |
| OFC | Dhx16 | alternative polyA | XM_039098480.1 | 0.29 | 1 | 0.25 | 9.5e-07 | 5.66 | 1.48e-08 | 0.2 | FALSE |
| OFC | Dhx16 | alternative polyA | XM_039098480.1 | 0.3 | 1 | 0.26 | 7.2e-07 | 5.64 | 1.66e-08 | 0.19 | FALSE |
| OFC | LOC120093125 | alternative polyA | XM_039099255.1 | 0.33 | 1 | 0.26 | 5.8e-07 | -5.66 | 1.48e-08 | 0.27 | FALSE |
| OFC | LOC120093125 | alternative polyA | XM_039099256.1 | 0.31 | 12 | 0.27 | 3.4e-07 | 5.54 | 3.04e-08 | 0.56 | FALSE |
| OFC | LOC120093125 | alternative polyA | XM_039099257.1 | 0.18 | 1 | 0.09 | 3.2e-03 | 5.7 | 1.18e-08 | 0.08 | FALSE |
| OFC | LOC120093125 | alternative polyA | XM_039099255.1 | 0.2 | 948 | 0.12 | 1.0e-03 | 5.56 | 2.68e-08 | 0.57 | FALSE |
| OFC | LOC120093125 | alternative polyA | XM_039099256.1 | 0.19 | 1 | 0.17 | 8.7e-05 | -5.77 | 7.88e-09 | 0.12 | FALSE |
| OFC | LOC120093125 | alternative polyA | XM_039099257.1 | 0.34 | 128 | 0.24 | 2.1e-06 | 5.83 | 5.39e-09 | 0.68 | FALSE |
| OFC | RT1-CE4 | alternative polyA | XM_039098960.1 | 0.25 | 1 | 0.12 | 8.7e-04 | 5.3 | 1.13e-07 | 0.05 | FALSE |
| OFC | RT1-N2 | alternative polyA | XM_017601671.2 | 0.43 | 999 | 0.3 | 6.7e-08 | 5.62 | 1.95e-08 | 0.73 | FALSE |
| OFC | RT1-N2 | alternative polyA | XM_039098786.1 | 0.34 | 16 | 0.3 | 7.7e-08 | 5.84 | 5.36e-09 | 0.67 | FALSE |
| OFC | RT1-N2 | alternative polyA | NM_001008854.2 | 0.45 | 19 | 0.41 | 7.5e-11 | -5.85 | 4.83e-09 | 0.7 | FALSE |
| OFC | RT1-N2 | alternative polyA | XM_039098786.1 | 0.4 | 19 | 0.36 | 2.0e-09 | 5.85 | 4.96e-09 | 0.68 | FALSE |
| OFC | RT1-N2 | alternative TSS | XM_039098783.1 | 0.2 | 1 | 0.18 | 4.5e-05 | 5.8 | 6.48e-09 | 0.09 | FALSE |
| OFC | RT1-N3 | alternative TSS | XM_039098420.1 | 0.41 | 1 | 0.31 | 3.7e-08 | 5.8 | 6.48e-09 | 0.58 | FALSE |
| OFC | RT1-T24-3 | alternative TSS | NM_001166403.1 | 0.16 | 1206 | 0.04 | 4.7e-02 | 5.22 | 1.76e-07 | 0.43 | FALSE |
| OFC | RT1-T24-3 | alternative TSS | XM_039098963.1 | 0.17 | 1 | 0.04 | 3.1e-02 | 5.71 | 1.13e-08 | 0.06 | FALSE |
| OFC | Abcf1 | gene expression | Abcf1 | 0.66 | 1 | 0.35 | 4.8e-09 | 5.81 | 6.14e-09 | 0.76 | FALSE |
| OFC | Cchcr1 | gene expression | Cchcr1 | 0.84 | 1 | 0.46 | 3.0e-12 | -5.8 | 6.55e-09 | 0.8 | FALSE |
| OFC | Dhx16 | gene expression | Dhx16 | 0.32 | 1 | 0.14 | 2.8e-04 | 5.8 | 6.48e-09 | 0.16 | FALSE |
| OFC | Gpank1 | gene expression | Gpank1 | 0.43 | 13 | 0.3 | 8.9e-08 | -5.22 | 1.82e-07 | 0.26 | FALSE |
| OFC | LOC108349027 | gene expression | LOC108349027 | 0.24 | 1 | 0.14 | 3.5e-04 | 5.72 | 1.08e-08 | 0.06 | FALSE |
| OFC | LOC120093125 | gene expression | LOC120093125 | 0.95 | 1 | 0.44 | 1.1e-11 | 5.66 | 1.48e-08 | 0.65 | FALSE |
| OFC | LOC120098966 | gene expression | LOC120098966 | 0.28 | 1171 | 0.13 | 5.7e-04 | 5.18 | 2.20e-07 | 0.46 | FALSE |
| OFC | RT1-N2 | gene expression | RT1-N2 | 0.73 | 13 | 0.39 | 2.3e-10 | 5.74 | 9.27e-09 | 0.71 | FALSE |
| OFC | RT1-O1 | gene expression | RT1-O1 | 0.83 | 1038 | 0.3 | 5.8e-08 | 5.65 | 1.58e-08 | 0.66 | FALSE |
| OFC | RT1-S2 | gene expression | RT1-S2 | 0.76 | 1016 | 0.38 | 5.1e-10 | 5.44 | 5.42e-08 | 0.57 | FALSE |
| OFC | RT1-T18 | gene expression | RT1-T18 | 0.4 | 1 | 0.2 | 1.5e-05 | 5.66 | 1.48e-08 | 0.17 | FALSE |
| OFC | RT1-T24-2 | gene expression | RT1-T24-2 | 0.2 | 1 | 0.04 | 3.5e-02 | 5.83 | 5.42e-09 | 0.06 | FALSE |
| OFC | Tcf19 | gene expression | Tcf19 | 0.29 | 1 | 0.15 | 1.7e-04 | -5.81 | 6.14e-09 | 0.09 | FALSE |
| OFC | Dhx16 | isoform ratio | NM_212496.2 | 0.3 | 1 | 0.22 | 7.8e-06 | -5.64 | 1.66e-08 | 0.11 | FALSE |
| OFC | Dhx16 | isoform ratio | XM_039098480.1 | 0.5 | 1 | 0.2 | 1.4e-05 | 5.66 | 1.48e-08 | 0.12 | FALSE |
| OFC | LOC120093125 | isoform ratio | XM_039099257.1 | 0.32 | 8 | 0.23 | 4.0e-06 | -5.67 | 1.45e-08 | 0.68 | FALSE |
| OFC | RT1-CE5 | isoform ratio | XM_039098672.1 | 0.5 | 2983 | 0.22 | 4.7e-06 | -5.26 | 1.40e-07 | 0.45 | FALSE |
| OFC | RT1-N2 | isoform ratio | XM_039098783.1 | 0.49 | 27 | 0.43 | 2.4e-11 | 5.27 | 1.33e-07 | 0.74 | FALSE |
| OFC | RT1-N2 | isoform ratio | XM_039098786.1 | 0.48 | 34 | 0.37 | 9.1e-10 | 5.79 | 6.89e-09 | 0.72 | FALSE |
| OFC | Abcf1 | intron excision ratio | chr20_2802656_2807786 | 0.27 | 3 | 0.11 | 1.6e-03 | -5.78 | 7.69e-09 | 0.57 | FALSE |
| OFC | Prrc2a | intron excision ratio | chr20_3671020_3671202 | 0.18 | 18 | 0.09 | 3.8e-03 | -5.34 | 9.51e-08 | 0.15 | TRUE |
| OFC | RT1-CE10 | intron excision ratio | chr20_3297784_3377524 | 0.42 | 171 | 0.14 | 4.2e-04 | 5.23 | 1.66e-07 | 0.69 | FALSE |
| OFC | RT1-CE11 | intron excision ratio | chr20_3297784_3377524 | 0.41 | 181 | 0.14 | 4.2e-04 | 5.25 | 1.52e-07 | 0.69 | FALSE |
| OFC | RT1-CE13 | intron excision ratio | chr20_3300498_3317965 | 0.18 | 2580 | 0.03 | 8.5e-02 | 5.23 | 1.68e-07 | 0.14 | TRUE |
| OFC | RT1-CE13 | intron excision ratio | chr20_3317762_3317965 | 0.17 | 2580 | 0.02 | 9.8e-02 | -5.22 | 1.77e-07 | 0.13 | FALSE |
| OFC | RT1-CE14 | intron excision ratio | chr20_3300498_3317965 | 0.18 | 2490 | 0.03 | 7.4e-02 | 5.26 | 1.48e-07 | 0.14 | FALSE |
| OFC | RT1-CE14 | intron excision ratio | chr20_3317762_3317965 | 0.17 | 2490 | 0.03 | 8.6e-02 | -5.25 | 1.54e-07 | 0.13 | FALSE |
| OFC | RT1-CE4 | mRNA stability | RT1-CE4 | 0.38 | 1 | 0.14 | 2.9e-04 | -5.72 | 1.07e-08 | 0.13 | FALSE |
| OFC | RT1-S3 | mRNA stability | RT1-S3 | 0.15 | 1120 | 0.11 | 1.6e-03 | -5.48 | 4.23e-08 | 0.52 | FALSE |
| PL | Dhx16 | alternative polyA | NM_212496.2 | 0.06 | 5 | 0.06 | 3.7e-07 | 5.28 | 1.26e-07 | 0.66 | FALSE |
| PL | Dhx16 | alternative polyA | XM_039098480.1 | 0.14 | 1 | 0.16 | 1.2e-17 | 5.87 | 4.42e-09 | 0.84 | FALSE |
| PL | Dhx16 | alternative polyA | XM_039098480.1 | 0.14 | 1 | 0.16 | 2.0e-17 | 5.72 | 1.07e-08 | 0.69 | FALSE |
| PL | Dhx16 | alternative polyA | XM_039098481.1 | 0.04 | 1 | 0.04 | 6.6e-05 | -5.73 | 1.01e-08 | 0.29 | FALSE |
| PL | LOC120093125 | alternative polyA | XM_039099255.1 | 0.3 | 30 | 0.37 | 1.1e-42 | -5.88 | 4.13e-09 | 0.76 | FALSE |
| PL | LOC120093125 | alternative polyA | XM_039099257.1 | 0.33 | 18 | 0.42 | 2.9e-49 | -5.88 | 4.22e-09 | 0.75 | FALSE |
| PL | LOC120093125 | alternative polyA | XM_039099255.1 | 0.3 | 8 | 0.37 | 1.6e-42 | 5.86 | 4.70e-09 | 0.76 | FALSE |
| PL | LOC120093125 | alternative polyA | XM_039099257.1 | 0.35 | 18 | 0.43 | 3.0e-51 | -5.86 | 4.68e-09 | 0.75 | FALSE |
| PL | LOC120098967 | alternative polyA | XR_005497790.1 | 0.25 | 10 | 0.23 | 1.5e-24 | -5.7 | 1.17e-08 | 0.7 | FALSE |
| PL | LOC120098967 | alternative polyA | XR_005497791.1 | 0.25 | 9 | 0.22 | 2.5e-24 | 5.7 | 1.17e-08 | 0.7 | FALSE |
| PL | RT1-N2 | alternative polyA | XM_017601671.2 | 0.37 | 1 | 0.27 | 1.8e-29 | -5.6 | 2.15e-08 | 0.55 | FALSE |
| PL | Ddr1 | alternative TSS | XM_017601558.2 | 0.05 | 1315 | 0.05 | 7.0e-06 | 5.37 | 7.86e-08 | 0.57 | FALSE |
| PL | Ddr1 | alternative TSS | XM_017601558.2 | 0.06 | 1315 | 0.05 | 3.1e-06 | 5.36 | 8.40e-08 | 0.57 | FALSE |
| PL | Dhx16 | alternative TSS | XM_039098484.1 | 0.05 | 1315 | 0.03 | 4.3e-04 | 5.29 | 1.20e-07 | 0.57 | FALSE |
| PL | RT1-N2 | alternative TSS | NM_001008854.2 | 0.23 | 30 | 0.25 | 1.0e-26 | 5.29 | 1.25e-07 | 0.63 | FALSE |
| PL | RT1-N2 | alternative TSS | XM_039098786.1 | 0.52 | 27 | 0.22 | 2.3e-23 | -5.67 | 1.45e-08 | 0.73 | FALSE |
| PL | RT1-N3 | alternative TSS | XM_039098420.1 | 0.45 | 56 | 0.46 | 1.2e-55 | 5.95 | 2.73e-09 | 0.72 | FALSE |
| PL | Abcf1 | gene expression | Abcf1 | 0.74 | 52 | 0.41 | 1.0e-47 | -5.86 | 4.72e-09 | 0.71 | FALSE |
| PL | Cchcr1 | gene expression | Cchcr1 | 0.71 | 155 | 0.75 | 2.7e-124 | -5.82 | 6.00e-09 | 0.72 | FALSE |
| PL | Cdsn | gene expression | Cdsn | 0.13 | 1 | 0.12 | 3.7e-13 | -5.87 | 4.24e-09 | 0.86 | FALSE |
| PL | Ddr1 | gene expression | Ddr1 | 0.11 | 1 | 0.14 | 3.9e-15 | -5.83 | 5.64e-09 | 0.8 | FALSE |
| PL | G4 | gene expression | G4 | 0.25 | 11 | 0.12 | 1.3e-13 | 5.57 | 2.51e-08 | 0.26 | FALSE |
| PL | Gtf2h4 | gene expression | Gtf2h4 | 0.16 | 1 | 0.14 | 3.7e-15 | -5.6 | 2.15e-08 | 0.53 | FALSE |
| PL | RT1-O1 | gene expression | RT1-O1 | 0.44 | 22 | 0.68 | 1.2e-101 | 5.87 | 4.29e-09 | 0.71 | FALSE |
| PL | RT1-S2 | gene expression | RT1-S2 | 0.42 | 35 | 0.7 | 5.2e-107 | -5.77 | 7.75e-09 | 0.72 | FALSE |
| PL | RT1-T18 | gene expression | RT1-T18 | 0.35 | 44 | 0.51 | 1.3e-65 | 5.93 | 2.98e-09 | 0.74 | FALSE |
| PL | RT1-T24-2 | gene expression | RT1-T24-2 | 0.15 | 19 | 0.18 | 2.7e-19 | -5.77 | 7.77e-09 | 0.71 | FALSE |
| PL | Tnf | gene expression | Tnf | 0.07 | 24 | 0.03 | 9.0e-04 | -5.4 | 6.77e-08 | 0.34 | FALSE |
| PL | Vars2 | gene expression | Vars2 | 0.25 | 1320 | 0.35 | 3.4e-40 | -5.66 | 1.50e-08 | 0.52 | FALSE |
| PL | Abcf1 | isoform ratio | NM_001109883.2 | 0.18 | 1 | 0.22 | 5.2e-24 | -5.73 | 9.95e-09 | 0.7 | FALSE |
| PL | Abcf1 | isoform ratio | XM_017601783.2 | 0.18 | 1 | 0.22 | 4.8e-24 | 5.73 | 9.95e-09 | 0.7 | FALSE |
| PL | Dhx16 | isoform ratio | NM_212496.2 | 0.04 | 1 | 0.03 | 2.3e-04 | -5.75 | 9.05e-09 | 0.34 | FALSE |
| PL | Dhx16 | isoform ratio | XM_039098480.1 | 0.15 | 1 | 0.19 | 6.0e-21 | 5.87 | 4.42e-09 | 0.84 | FALSE |
| PL | LOC120093125 | isoform ratio | XM_039099255.1 | 0.24 | 19 | 0.33 | 3.7e-37 | 5.21 | 1.90e-07 | 0.02 | FALSE |
| PL | LOC120093125 | isoform ratio | XM_039099256.1 | 0.03 | 1 | 0.02 | 2.0e-03 | -5.6 | 2.15e-08 | 0.07 | FALSE |
| PL | LOC120093125 | isoform ratio | XM_039099257.1 | 0.46 | 1 | 0.48 | 1.6e-59 | 5.7 | 1.17e-08 | 0.71 | FALSE |
| PL | LOC120098967 | isoform ratio | XR_005497791.1 | 0.2 | 24 | 0.22 | 1.3e-23 | 5.39 | 7.04e-08 | 0.71 | FALSE |
| PL | RT1-N2 | isoform ratio | XM_017601671.2 | 0.14 | 999 | 0.17 | 2.2e-18 | 5.56 | 2.63e-08 | 0.69 | FALSE |
| PL | RT1-N2 | isoform ratio | XM_039098783.1 | 0.27 | 83 | 0.31 | 1.5e-34 | -5.55 | 2.88e-08 | 0.72 | FALSE |
| PL | RT1-N2 | isoform ratio | XM_039098785.1 | 0.34 | 13 | 0.47 | 3.2e-58 | 5.78 | 7.33e-09 | 0.72 | FALSE |
| PL | RT1-N2 | isoform ratio | XM_039098786.1 | 0.44 | 1 | 0.34 | 4.3e-38 | -5.64 | 1.66e-08 | 0.61 | FALSE |
| PL | RT1-N3 | isoform ratio | XM_039098420.1 | 0.35 | 27 | 0.31 | 4.5e-35 | -5.92 | 3.14e-09 | 0.73 | FALSE |
| PL | RT1-S3 | isoform ratio | XM_006255917.4 | 0.15 | 42 | 0.09 | 2.5e-10 | -5.2 | 1.98e-07 | 0 | FALSE |
| PL | Abcf1 | intron excision ratio | chr20_2802656_2806896 | 0.1 | 1268 | 0.09 | 4.4e-10 | 5.58 | 2.35e-08 | 0.69 | FALSE |
| PL | Abcf1 | intron excision ratio | chr20_2802656_2807786 | 0.23 | 1 | 0.24 | 4.3e-26 | 5.7 | 1.17e-08 | 0.67 | FALSE |
| PL | Abcf1 | intron excision ratio | chr20_2806942_2807786 | 0.12 | 1 | 0.11 | 1.7e-12 | -5.8 | 6.56e-09 | 0.78 | FALSE |
| PL | Ddr1 | intron excision ratio | chr20_3042649_3051258 | 0.04 | 1315 | 0.03 | 7.4e-04 | 5.38 | 7.61e-08 | 0.55 | FALSE |
| PL | Ddr1 | intron excision ratio | chr20_3058925_3060490 | 0.1 | 1315 | 0.03 | 2.0e-04 | 6.25 | 4.17e-10 | 0.64 | FALSE |
| PL | Dhx16 | intron excision ratio | chr20_2863589_2864697 | 0.07 | 23 | 0.06 | 6.2e-07 | 5.9 | 3.66e-09 | 0.72 | FALSE |
| PL | RT1-CE13 | intron excision ratio | chr20_3258719_3259691 | 0.6 | 75 | 0.55 | 3.7e-73 | 5.57 | 2.52e-08 | 0 | FALSE |
| PL | RT1-CE15 | intron excision ratio | chr20_3258719_3259691 | 0.65 | 68 | 0.55 | 3.6e-73 | 5.66 | 1.48e-08 | 0 | FALSE |
| PL | RT1-CE16 | intron excision ratio | chr20_3258719_3259691 | 0.65 | 65 | 0.55 | 3.7e-73 | 5.68 | 1.35e-08 | 0 | FALSE |
| PL | RT1-CE7 | intron excision ratio | chr20_3517535_3517713 | 0.23 | 2972 | 0.25 | 6.4e-27 | -5.18 | 2.18e-07 | 0.1 | FALSE |
| PL | RT1-T24-3 | intron excision ratio | chr20_2694069_2724607 | 0.5 | 5 | 0.23 | 1.7e-24 | 5.41 | 6.30e-08 | 0.06 | TRUE |
| PL | RT1-T24-3 | intron excision ratio | chr20_2694069_2745591 | 0.21 | 29 | 0.18 | 1.6e-19 | -5.33 | 9.64e-08 | 0.01 | FALSE |
| PL | RT1-T24-4 | intron excision ratio | chr20_2691928_2692062 | 0.43 | 20 | 0.45 | 3.5e-55 | -5.33 | 9.61e-08 | 0.06 | FALSE |
| PL | RT1-T24-4 | intron excision ratio | chr20_2694069_2724607 | 0.49 | 5 | 0.23 | 1.7e-24 | 5.4 | 6.73e-08 | 0.06 | FALSE |
| PL | RT1-T24-4 | intron excision ratio | chr20_2694069_2745591 | 0.21 | 29 | 0.18 | 1.6e-19 | -5.33 | 9.61e-08 | 0.01 | FALSE |
| PL | RT1-T24-4 | intron excision ratio | chr20_2741569_2741756 | 0.07 | 42 | 0.06 | 3.9e-07 | -5.95 | 2.63e-09 | 0.74 | FALSE |
| PL | Dhx16 | mRNA stability | Dhx16 | 0.3 | 32 | 0.32 | 2.0e-35 | 5.7 | 1.21e-08 | 0.71 | FALSE |
| pVTA | Dhx16 | alternative polyA | XM_039098480.1 | 0.2 | 1 | 0.12 | 1.0e-05 | 5.64 | 1.68e-08 | 0.37 | FALSE |
| pVTA | Dhx16 | alternative polyA | XM_039098480.1 | 0.22 | 1 | 0.13 | 3.1e-06 | 5.64 | 1.68e-08 | 0.51 | FALSE |
| pVTA | LOC120093125 | alternative polyA | XM_039099255.1 | 0.21 | 1 | 0.15 | 3.2e-07 | -5.81 | 6.32e-09 | 0.66 | FALSE |
| pVTA | LOC120093125 | alternative polyA | XM_039099257.1 | 0.42 | 5 | 0.27 | 4.0e-12 | -5.96 | 2.58e-09 | 0.76 | FALSE |
| pVTA | LOC120093125 | alternative polyA | XM_039099255.1 | 0.29 | 1 | 0.2 | 5.8e-09 | -5.81 | 6.32e-09 | 0.8 | FALSE |
| pVTA | LOC120093125 | alternative polyA | XM_039099257.1 | 0.39 | 5 | 0.27 | 5.8e-12 | -5.96 | 2.46e-09 | 0.76 | FALSE |
| pVTA | LOC120098967 | alternative polyA | XR_005497790.1 | 0.29 | 8 | 0.15 | 6.4e-07 | -5.82 | 5.85e-09 | 0.71 | FALSE |
| pVTA | LOC120098967 | alternative polyA | XR_005497791.1 | 0.29 | 8 | 0.15 | 7.1e-07 | 5.82 | 5.83e-09 | 0.7 | FALSE |
| pVTA | RT1-CE1 | alternative polyA | NM_001008832.2 | 0.35 | 2914 | 0.24 | 9.2e-11 | 5.25 | 1.49e-07 | 0.36 | FALSE |
| pVTA | RT1-CE1 | alternative polyA | XM_039098653.1 | 0.36 | 2914 | 0.25 | 2.4e-11 | -5.18 | 2.17e-07 | 0.2 | FALSE |
| pVTA | RT1-CE5 | alternative polyA | XM_039098672.1 | 0.26 | 11 | 0.14 | 8.8e-07 | -5.45 | 4.98e-08 | 0.17 | FALSE |
| pVTA | RT1-N2 | alternative polyA | XM_006255938.4 | 0.1 | 9 | 0.04 | 6.0e-03 | -5.33 | 1.01e-07 | 0.51 | FALSE |
| pVTA | RT1-N2 | alternative polyA | XM_017601671.2 | 0.36 | 1 | 0.17 | 9.0e-08 | -5.66 | 1.48e-08 | 0.61 | FALSE |
| pVTA | RT1-N2 | alternative polyA | XM_039098786.1 | 0.31 | 1 | 0.23 | 2.1e-10 | -5.8 | 6.56e-09 | 0.79 | FALSE |
| pVTA | RT1-N2 | alternative TSS | NM_001008854.2 | 0.17 | 15 | 0.15 | 5.1e-07 | 5.64 | 1.70e-08 | 0.66 | FALSE |
| pVTA | RT1-N2 | alternative TSS | XM_039098786.1 | 0.17 | 999 | 0.12 | 8.8e-06 | 5.82 | 5.81e-09 | 0.69 | FALSE |
| pVTA | RT1-N3 | alternative TSS | XM_039098420.1 | 0.48 | 8 | 0.31 | 9.2e-14 | -5.93 | 2.96e-09 | 0.75 | FALSE |
| pVTA | RT1-N3 | alternative TSS | NM_001008855.2 | 0.25 | 4 | 0.18 | 4.1e-08 | 5.72 | 1.06e-08 | 0.74 | FALSE |
| pVTA | Abcf1 | gene expression | Abcf1 | 0.34 | 32 | 0.29 | 3.2e-13 | 5.71 | 1.11e-08 | 0.69 | FALSE |
| pVTA | Cchcr1 | gene expression | Cchcr1 | 0.53 | 276 | 0.38 | 9.9e-18 | -5.74 | 9.33e-09 | 0.47 | FALSE |
| pVTA | Ddr1 | gene expression | Ddr1 | 0.16 | 1 | 0.14 | 1.6e-06 | -5.64 | 1.68e-08 | 0.38 | FALSE |
| pVTA | Gtf2h4 | gene expression | Gtf2h4 | 0.1 | 1 | 0.08 | 2.2e-04 | -5.83 | 5.59e-09 | 0.32 | FALSE |
| pVTA | LOC120098966 | gene expression | LOC120098966 | 0.12 | 26 | 0.04 | 1.2e-02 | -5.77 | 7.74e-09 | 0.64 | FALSE |
| pVTA | RT1-N2 | gene expression | RT1-N2 | 0.7 | 16 | 0.54 | 1.6e-27 | 5.55 | 2.81e-08 | 0.73 | FALSE |
| pVTA | RT1-O1 | gene expression | RT1-O1 | 0.63 | 58 | 0.49 | 3.5e-24 | -5.32 | 1.04e-07 | 0.73 | FALSE |
| pVTA | RT1-T18 | gene expression | RT1-T18 | 0.17 | 1 | 0.1 | 4.0e-05 | 5.75 | 9.00e-09 | 0.54 | FALSE |
| pVTA | RT1-T24-4 | gene expression | RT1-T24-4 | 0.14 | 35 | 0.07 | 3.7e-04 | -5.2 | 2.02e-07 | 0.62 | FALSE |
| pVTA | Tcf19 | gene expression | Tcf19 | 0.06 | 5 | 0.03 | 1.8e-02 | -5.23 | 1.68e-07 | 0.24 | FALSE |
| pVTA | Tubb5 | gene expression | Tubb5 | 0.18 | 1 | 0.07 | 5.5e-04 | -5.53 | 3.28e-08 | 0.05 | FALSE |
| pVTA | Vars2 | gene expression | Vars2 | 0.14 | 1 | 0.09 | 1.1e-04 | 5.8 | 6.76e-09 | 0.29 | FALSE |
| pVTA | Abcf1 | isoform ratio | NM_001109883.2 | 0.15 | 1268 | 0.06 | 1.4e-03 | 5.74 | 9.40e-09 | 0.64 | FALSE |
| pVTA | Abcf1 | isoform ratio | XM_017601783.2 | 0.13 | 1268 | 0.05 | 3.1e-03 | -5.76 | 8.22e-09 | 0.6 | FALSE |
| pVTA | Atat1 | isoform ratio | XM_039098797.1 | 0.08 | 4 | 0.02 | 4.8e-02 | -5.45 | 5.08e-08 | 0.36 | FALSE |
| pVTA | Dhx16 | isoform ratio | XM_039098480.1 | 0.1 | 1 | 0.04 | 6.9e-03 | -5.72 | 1.06e-08 | 0.57 | FALSE |
| pVTA | LOC120093125 | isoform ratio | XM_039099257.1 | 0.49 | 1 | 0.29 | 3.9e-13 | 5.81 | 6.32e-09 | 0.81 | FALSE |
| pVTA | LOC120098967 | isoform ratio | XR_005497790.1 | 0.18 | 1258 | 0.08 | 3.1e-04 | -5.65 | 1.60e-08 | 0.59 | FALSE |
| pVTA | LOC120098967 | isoform ratio | XR_005497791.1 | 0.19 | 1258 | 0.08 | 2.0e-04 | 5.7 | 1.17e-08 | 0.61 | FALSE |
| pVTA | RT1-N2 | isoform ratio | XM_039098783.1 | 0.27 | 1 | 0.13 | 2.4e-06 | -5.66 | 1.48e-08 | 0.55 | FALSE |
| pVTA | RT1-N2 | isoform ratio | XM_039098785.1 | 0.4 | 1 | 0.26 | 1.3e-11 | 5.75 | 9.00e-09 | 0.74 | FALSE |
| pVTA | RT1-N2 | isoform ratio | XM_039098786.1 | 0.35 | 39 | 0.23 | 2.9e-10 | -5.4 | 6.76e-08 | 0.61 | FALSE |
| pVTA | RT1-N3 | isoform ratio | XM_039098420.1 | 0.4 | 5 | 0.19 | 1.3e-08 | -5.89 | 3.83e-09 | 0.74 | FALSE |
| pVTA | Abcf1 | intron excision ratio | chr20_2802656_2806896 | 0.17 | 1268 | 0.11 | 1.9e-05 | 5.77 | 7.92e-09 | 0.67 | FALSE |
| pVTA | Abcf1 | intron excision ratio | chr20_2802656_2807786 | 0.31 | 15 | 0.25 | 3.3e-11 | -5.7 | 1.21e-08 | 0.71 | FALSE |
| pVTA | Abcf1 | intron excision ratio | chr20_2806942_2807786 | 0.26 | 18 | 0.22 | 1.1e-09 | 5.71 | 1.15e-08 | 0.7 | FALSE |
| pVTA | Atat1 | intron excision ratio | chr20_2851533_2854003 | 0.2 | 1 | 0.07 | 4.4e-04 | 5.77 | 8.07e-09 | 0.23 | FALSE |
| pVTA | Dhx16 | intron excision ratio | chr20_2863589_2864697 | 0.1 | 1315 | 0.07 | 8.5e-04 | 5.67 | 1.45e-08 | 0.49 | FALSE |
| pVTA | Lst1 | intron excision ratio | chr20_3635675_3635980 | 0.28 | 81 | 0.17 | 9.3e-08 | 5.22 | 1.76e-07 | 0.1 | FALSE |
| pVTA | RT1-CE10 | intron excision ratio | chr20_3297784_3298011 | 0.23 | 2 | 0.14 | 8.0e-07 | -5.71 | 1.15e-08 | 0.01 | FALSE |
| pVTA | RT1-CE14 | intron excision ratio | chr20_3275920_3276054 | 0.25 | 13 | 0.24 | 7.4e-11 | -5.49 | 4.08e-08 | 0.02 | FALSE |
| pVTA | RT1-CE14 | intron excision ratio | chr20_3297784_3298011 | 0.24 | 2 | 0.14 | 7.9e-07 | -5.75 | 8.99e-09 | 0.01 | FALSE |
| pVTA | RT1-CE15 | intron excision ratio | chr20_3275920_3276054 | 0.25 | 13 | 0.24 | 7.4e-11 | -5.51 | 3.65e-08 | 0.02 | FALSE |
| pVTA | RT1-CE15 | intron excision ratio | chr20_3297784_3298011 | 0.25 | 2 | 0.15 | 7.7e-07 | -5.78 | 7.54e-09 | 0.01 | FALSE |
| pVTA | RT1-CE16 | intron excision ratio | chr20_3275920_3276054 | 0.25 | 13 | 0.24 | 7.4e-11 | -5.49 | 4.05e-08 | 0.02 | FALSE |
| pVTA | RT1-T24-1 | intron excision ratio | chr20_2691465_2691643 | 0.25 | 49 | 0.13 | 2.9e-06 | -5.43 | 5.57e-08 | 0.57 | FALSE |
| pVTA | RT1-T24-3 | intron excision ratio | chr20_2724745_2725194 | 0.09 | 1 | 0.06 | 1.1e-03 | 5.72 | 1.06e-08 | 0.07 | FALSE |
| pVTA | RT1-T24-4 | intron excision ratio | chr20_2688990_2690922 | 0.13 | 1 | 0.06 | 1.9e-03 | 5.71 | 1.16e-08 | 0.21 | FALSE |
| pVTA | RT1-T24-4 | intron excision ratio | chr20_2691465_2691643 | 0.24 | 46 | 0.14 | 8.2e-07 | -5.5 | 3.77e-08 | 0.58 | FALSE |
| pVTA | RT1-T24-4 | intron excision ratio | chr20_2691672_2691881 | 0.09 | 4 | 0.04 | 7.3e-03 | 5.63 | 1.83e-08 | 0.54 | FALSE |
| RMTg | Dhx16 | alternative polyA | XM_039098480.1 | 0.27 | 9 | 0.14 | 1.4e-04 | 5.41 | 6.38e-08 | 0.6 | FALSE |
| RMTg | LOC120093125 | alternative polyA | XM_039099256.1 | 0.21 | 1 | 0.08 | 4.3e-03 | -5.81 | 6.41e-09 | 0.09 | FALSE |
| RMTg | LOC120093125 | alternative polyA | XM_039099257.1 | 0.22 | 1 | 0.14 | 1.4e-04 | 5.79 | 7.01e-09 | 0.12 | FALSE |
| RMTg | LOC120093125 | alternative polyA | XM_039099256.1 | 0.13 | 9 | 0.04 | 2.4e-02 | -5.76 | 8.43e-09 | 0.4 | FALSE |
| RMTg | LOC120093125 | alternative polyA | XM_039099257.1 | 0.2 | 1 | 0.11 | 8.3e-04 | 5.79 | 7.01e-09 | 0.1 | FALSE |
| RMTg | RT1-CE4 | alternative polyA | XM_039098960.1 | 0.49 | 1 | 0.17 | 3.0e-05 | -5.81 | 6.32e-09 | 0.26 | FALSE |
| RMTg | RT1-CE4 | alternative polyA | XM_039098961.1 | 0.45 | 1 | 0.13 | 2.1e-04 | 5.81 | 6.32e-09 | 0.12 | FALSE |
| RMTg | RT1-N2 | alternative polyA | NM_001008854.2 | 0.36 | 42 | 0.27 | 7.7e-08 | 5.35 | 8.65e-08 | 0.63 | FALSE |
| RMTg | RT1-N2 | alternative polyA | XM_006255938.4 | 0.13 | 30 | 0.04 | 2.6e-02 | -5.51 | 3.68e-08 | 0.43 | FALSE |
| RMTg | Gpank1 | gene expression | Gpank1 | 0.13 | 1 | 0.11 | 8.5e-04 | 5.22 | 1.79e-07 | 0.06 | FALSE |
| RMTg | Mrps18b | gene expression | Mrps18b | 0.32 | 15 | 0.13 | 1.9e-04 | 5.31 | 1.10e-07 | 0.62 | FALSE |
| RMTg | RT1-N2 | gene expression | RT1-N2 | 0.46 | 20 | 0.33 | 1.3e-09 | -5.79 | 7.06e-09 | 0.72 | FALSE |
| RMTg | RT1-S3 | gene expression | RT1-S3 | 0.22 | 31 | 0.11 | 6.3e-04 | -5.71 | 1.16e-08 | 0.57 | FALSE |
| RMTg | Abcf1 | isoform ratio | NM_001109883.2 | 0.2 | 1 | 0.14 | 1.7e-04 | -5.66 | 1.52e-08 | 0.07 | FALSE |
| RMTg | Abcf1 | isoform ratio | XM_017601783.2 | 0.22 | 1 | 0.16 | 4.5e-05 | 5.66 | 1.52e-08 | 0.09 | FALSE |
| RMTg | Dhx16 | isoform ratio | NM_212496.2 | 0.2 | 39 | 0.04 | 3.2e-02 | -6.02 | 1.71e-09 | 0.5 | FALSE |
| RMTg | Mrps18b | isoform ratio | NM_212534.2 | 0.13 | 1293 | 0.07 | 7.4e-03 | -5.61 | 2.07e-08 | 0.37 | FALSE |
| RMTg | Mrps18b | isoform ratio | XM_039098476.1 | 0.15 | 1293 | 0.08 | 4.3e-03 | 5.57 | 2.50e-08 | 0.41 | FALSE |
| RMTg | Abcf1 | intron excision ratio | chr20_2802656_2807786 | 0.15 | 8 | 0.08 | 4.3e-03 | -5.85 | 4.93e-09 | 0.48 | FALSE |
| RMTg | Atat1 | mRNA stability | Atat1 | 0.18 | 23 | 0.09 | 2.0e-03 | 5.21 | 1.88e-07 | 0.57 | FALSE |
| RMTg | Dhx16 | mRNA stability | Dhx16 | 0.17 | 1 | 0.12 | 5.0e-04 | -5.69 | 1.28e-08 | 0.07 | FALSE |