Best TWAS P=2.58e-08 · Best GWAS P=4.32e-08 conditioned to 9.69e-54
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Clic2 | mRNA stability | Clic2 | 0.63 | 61 | 0.6 | 2.6e-83 | 5.25 | 1.51e-07 | 0.46 | FALSE |
Brain | Clic2 | gene expression | Clic2 | 0.52 | 26 | 0.31 | 2.3e-29 | -5.18 | 2.19e-07 | 0.48 | FALSE |
Brain | Tmlhe | gene expression | Tmlhe | 0.15 | 1 | 0.09 | 5.3e-09 | -5.22 | 1.83e-07 | 0.58 | FALSE |
Liver | Tmlhe | alternative TSS | XM_006255855.2 | 0.02 | 2305 | 0.02 | 5.9e-03 | -5.44 | 5.21e-08 | 0.36 | FALSE |
Liver | Tmlhe | alternative TSS | XM_006255855.2 | 0.02 | 2305 | 0.02 | 6.0e-03 | -5.44 | 5.38e-08 | 0.36 | FALSE |
Liver | Clic2 | gene expression | Clic2 | 0.27 | 2366 | 0.27 | 1.6e-30 | -5.57 | 2.58e-08 | 0.48 | TRUE |
Liver | Clic2 | mRNA stability | Clic2 | 0.34 | 33 | 0.39 | 1.5e-46 | 5.32 | 1.05e-07 | 0.47 | FALSE |
Liver | Tmlhe | mRNA stability | Tmlhe | 0.4 | 497 | 0.36 | 1.7e-41 | 5.28 | 1.29e-07 | 0.48 | FALSE |
OFC | Clic2 | gene expression | Clic2 | 0.21 | 2372 | 0.13 | 6.3e-04 | -5.34 | 9.07e-08 | 0.32 | FALSE |
OFC | Tmlhe | mRNA stability | Tmlhe | 0.26 | 2311 | 0.13 | 4.8e-04 | -5.56 | 2.73e-08 | 0.33 | FALSE |
PL | Tmlhe | gene expression | Tmlhe | 0.02 | 2311 | 0 | 1.0e-01 | 5.36 | 8.43e-08 | 0.34 | FALSE |
PL | Tmlhe | intron excision ratio | chr20_102395_105660 | 0.13 | 2311 | 0.09 | 6.5e-10 | -5.31 | 1.12e-07 | 0.46 | FALSE |