Best TWAS P = 4.00e-11 · Best GWAS P= 1.79e-08 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Ifi30 | gene expression | Ifi30 | 0.24 | 9 | 0.3 | 7.2e-34 | -6.15 | 7.73e-10 | 0.74 | FALSE |
| Adipose | LOC108348302 | gene expression | LOC108348302 | 0.17 | 47 | 0.11 | 5.3e-12 | 5.63 | 1.82e-08 | 0.85 | FALSE |
| Adipose | Pde4c | gene expression | Pde4c | 0.11 | 26 | 0.12 | 1.3e-13 | -5.44 | 5.36e-08 | 0.04 | FALSE |
| Adipose | Pgpep1 | gene expression | Pgpep1 | 0.05 | 1560 | 0.05 | 6.2e-06 | -6.32 | 2.62e-10 | 0.48 | FALSE |
| Adipose | Rfxank | gene expression | Rfxank | 0.05 | 19 | 0.03 | 2.7e-04 | -5.46 | 4.83e-08 | 0.82 | FALSE |
| Adipose | Tm6sf2 | gene expression | Tm6sf2 | 0.17 | 1460 | 0.01 | 6.9e-03 | 5.2 | 1.94e-07 | 0.37 | FALSE |
| Adipose | Tmem161a | gene expression | Tmem161a | 0.06 | 1 | 0.01 | 1.2e-02 | -5.5 | 3.70e-08 | 0.05 | FALSE |
| Adipose | Armc6 | mRNA stability | Armc6 | 0.07 | 56 | 0.05 | 5.6e-06 | 5.69 | 1.30e-08 | 0.77 | FALSE |
| Adipose | Ddx49 | mRNA stability | Ddx49 | 0.03 | 84 | 0.02 | 2.4e-03 | -5.48 | 4.22e-08 | 0.7 | TRUE |
| Adipose | Ell | mRNA stability | Ell | 0.11 | 103 | 0.13 | 3.1e-14 | -5.4 | 6.68e-08 | 0.46 | FALSE |
| BLA | B3gnt3 | gene expression | B3gnt3 | 0.27 | 1 | 0.24 | 5.5e-13 | 5.44 | 5.29e-08 | 0.75 | FALSE |
| BLA | Ifi30 | gene expression | Ifi30 | 0.33 | 21 | 0.21 | 1.4e-11 | -6.6 | 4.00e-11 | 0.72 | TRUE |
| BLA | Isyna1 | gene expression | Isyna1 | 0.05 | 1 | 0.06 | 7.2e-04 | 5.33 | 9.91e-08 | 0.06 | FALSE |
| BLA | Kxd1 | gene expression | Kxd1 | 0.08 | 1 | 0.05 | 1.0e-03 | -5.5 | 3.90e-08 | 0.12 | FALSE |
| BLA | Niban3 | gene expression | Niban3 | 0.57 | 21 | 0.48 | 4.5e-28 | 5.44 | 5.29e-08 | 0.76 | FALSE |
| BLA | Ddx49 | isoform ratio | NM_001115023.1 | 0.17 | 1 | 0.14 | 9.3e-08 | 5.46 | 4.82e-08 | 0.87 | FALSE |
| BLA | Ddx49 | isoform ratio | XM_063275187.1 | 0.17 | 1 | 0.13 | 2.0e-07 | -5.46 | 4.82e-08 | 0.87 | FALSE |
| BLA | Rfxank | isoform ratio | XM_006252899.5 | 0.07 | 1342 | 0.02 | 2.4e-02 | 5.21 | 1.92e-07 | 0.65 | FALSE |
| BLA | Unc13a | isoform ratio | XM_063275702.1 | 0.14 | 1 | 0.09 | 1.2e-05 | 5.44 | 5.29e-08 | 0.53 | FALSE |
| BLA | Rex1bd | intron excision ratio | chr16_18956270_18956810 | 0.07 | 1 | 0.05 | 1.7e-03 | 5.33 | 9.91e-08 | 0.07 | FALSE |
| BLA | Uba52 | intron excision ratio | chr16_18952661_18953399 | 0.07 | 1 | 0.05 | 1.5e-03 | 5.33 | 1.00e-07 | 0.06 | FALSE |
| BLA | Mast3 | mRNA stability | Mast3 | 0.07 | 6 | 0.05 | 1.8e-03 | 5.88 | 4.08e-09 | 0.2 | TRUE |
| BLA | Rfxank | mRNA stability | Rfxank | 0.09 | 1 | 0.04 | 4.5e-03 | -5.44 | 5.25e-08 | 0.08 | FALSE |
| Brain | B3gnt3 | alternative polyA | NM_001106068.1 | 0.03 | 1 | 0.03 | 1.9e-03 | 5.31 | 1.13e-07 | 0.04 | FALSE |
| Brain | Lrrc25 | alternative polyA | XM_039094882.2 | 0.03 | 1559 | 0.02 | 5.7e-03 | 5.38 | 7.45e-08 | 0.32 | FALSE |
| Brain | Jak3 | alternative TSS | XM_063275068.1 | 0.05 | 1 | 0.03 | 1.3e-03 | -5.38 | 7.28e-08 | 0.07 | FALSE |
| Brain | Jak3 | alternative TSS | XM_063275068.1 | 0.05 | 1 | 0.03 | 5.5e-04 | -5.32 | 1.05e-07 | 0.1 | FALSE |
| Brain | Slc25a42 | alternative TSS | NM_001127590.1 | 0.05 | 1 | 0.04 | 1.2e-04 | -5.71 | 1.13e-08 | 0.75 | FALSE |
| Brain | Slc25a42 | alternative TSS | XM_063275745.1 | 0.05 | 1 | 0.04 | 1.1e-04 | 5.71 | 1.13e-08 | 0.75 | FALSE |
| Brain | B3gnt3 | gene expression | B3gnt3 | 0.36 | 44 | 0.29 | 9.2e-28 | 5.3 | 1.17e-07 | 0.63 | FALSE |
| Brain | Borcs8 | gene expression | Borcs8 | 0.1 | 1 | 0.08 | 1.1e-07 | 5.25 | 1.51e-07 | 0.7 | FALSE |
| Brain | Colgalt1 | gene expression | Colgalt1 | 0.07 | 1510 | 0.05 | 3.4e-05 | -6.08 | 1.22e-09 | 0.61 | FALSE |
| Brain | Comp | gene expression | Comp | 0.55 | 123 | 0.25 | 1.9e-23 | -5.53 | 3.13e-08 | 0.89 | FALSE |
| Brain | Fcho1 | gene expression | Fcho1 | 0.16 | 1 | 0.06 | 1.4e-06 | 5.45 | 5.08e-08 | 0.65 | FALSE |
| Brain | Gdf15 | gene expression | Gdf15 | 0.07 | 1583 | 0.1 | 2.7e-09 | -5.44 | 5.29e-08 | 0.03 | FALSE |
| Brain | Ifi30 | gene expression | Ifi30 | 0.32 | 1546 | 0.44 | 2.2e-45 | -6.02 | 1.70e-09 | 0.03 | FALSE |
| Brain | LOC134482471 | gene expression | LOC134482471 | 0.04 | 1 | 0.03 | 5.1e-04 | 5.54 | 2.97e-08 | 0.41 | FALSE |
| Brain | Niban3 | gene expression | Niban3 | 0.55 | 275 | 0.65 | 4.8e-79 | 5.51 | 3.57e-08 | 0.75 | FALSE |
| Brain | Rfxank | gene expression | Rfxank | 0.11 | 12 | 0.07 | 1.7e-07 | -5.25 | 1.52e-07 | 0.8 | FALSE |
| Brain | Ddx49 | isoform ratio | NM_001115023.1 | 0.17 | 39 | 0.13 | 6.5e-12 | 5.47 | 4.54e-08 | 0.9 | TRUE |
| Brain | Ddx49 | isoform ratio | XM_063275187.1 | 0.19 | 1 | 0.15 | 1.0e-13 | -5.63 | 1.79e-08 | 0.95 | FALSE |
| Brain | Kcnn1 | isoform ratio | XM_063275658.1 | 0.03 | 1594 | 0.02 | 4.0e-03 | 5.25 | 1.55e-07 | 0.06 | FALSE |
| Brain | Niban3 | isoform ratio | XM_039094762.1 | 0.15 | 23 | 0.11 | 5.3e-10 | 5.48 | 4.32e-08 | 0.75 | FALSE |
| Brain | Unc13a | isoform ratio | XM_063275702.1 | 0.05 | 1 | 0.03 | 8.5e-04 | 5.44 | 5.29e-08 | 0.07 | FALSE |
| Brain | Uba52 | intron excision ratio | chr16_18952661_18953399 | 0.04 | 1340 | 0.04 | 2.7e-04 | 5.98 | 2.17e-09 | 0.53 | FALSE |
| Brain | Unc13a | intron excision ratio | chr16_18379955_18380405 | 0.19 | 1 | 0.13 | 8.8e-12 | 5.38 | 7.28e-08 | 0.69 | FALSE |
| Brain | Nr2c2ap | mRNA stability | Nr2c2ap | 0.12 | 1 | 0.13 | 4.2e-12 | 5.6 | 2.21e-08 | 0.94 | FALSE |
| Brain | Slc5a5 | mRNA stability | Slc5a5 | 0.05 | 1571 | 0.04 | 4.7e-05 | -5.54 | 2.95e-08 | 0.03 | FALSE |
| Brain | Upf1 | mRNA stability | Upf1 | 0.27 | 1 | 0.22 | 7.0e-20 | 5.48 | 4.14e-08 | 0.9 | FALSE |
| Eye | Slc27a1 | alternative polyA | XM_063275796.1 | 0.37 | 1 | 0.15 | 2.8e-03 | -5.34 | 9.11e-08 | 0.06 | FALSE |
| Eye | Ccdc124 | isoform ratio | NM_001106071.1 | 0.62 | 1590 | 0.16 | 1.7e-03 | -6 | 2.02e-09 | 0.36 | TRUE |
| Eye | Ccdc124 | isoform ratio | XM_006252867.5 | 0.53 | 1 | 0.12 | 7.4e-03 | 5.39 | 7.08e-08 | 0.06 | FALSE |
| Eye | Ddx49 | mRNA stability | Ddx49 | 0.42 | 1 | 0.24 | 1.5e-04 | -5.27 | 1.37e-07 | 0.07 | FALSE |
| IC | Niban3 | alternative TSS | XM_017600215.2 | 0.12 | 1528 | 0.06 | 1.2e-03 | -5.91 | 3.49e-09 | 0.69 | FALSE |
| IC | Niban3 | alternative TSS | XM_039094762.1 | 0.14 | 1528 | 0.09 | 1.7e-04 | 5.96 | 2.58e-09 | 0.72 | FALSE |
| IC | Niban3 | alternative TSS | XM_017600215.2 | 0.14 | 1528 | 0.09 | 1.3e-04 | -5.94 | 2.82e-09 | 0.65 | FALSE |
| IC | Niban3 | alternative TSS | XM_039094762.1 | 0.15 | 1528 | 0.1 | 3.7e-05 | 5.96 | 2.48e-09 | 0.68 | FALSE |
| IC | Nr2c2ap | alternative TSS | NM_001399420.1 | 0.07 | 1362 | 0.02 | 4.0e-02 | 5.3 | 1.19e-07 | 0.51 | FALSE |
| IC | Nr2c2ap | alternative TSS | XM_063275508.1 | 0.07 | 1362 | 0.02 | 3.7e-02 | -5.29 | 1.22e-07 | 0.51 | FALSE |
| IC | Rfxank | alternative TSS | XM_039094487.2 | 0.1 | 1 | 0.06 | 1.7e-03 | -5.33 | 1.00e-07 | 0.06 | FALSE |
| IC | Borcs8 | gene expression | Borcs8 | 0.11 | 1 | 0.09 | 1.9e-04 | -5.27 | 1.37e-07 | 0.15 | FALSE |
| IC | Comp | gene expression | Comp | 0.61 | 24 | 0.45 | 1.2e-20 | -5.46 | 4.76e-08 | 0.91 | FALSE |
| IC | Crtc1 | gene expression | Crtc1 | 0.04 | 1 | 0.04 | 6.6e-03 | -5.3 | 1.15e-07 | 0.06 | FALSE |
| IC | Ifi30 | gene expression | Ifi30 | 0.42 | 1546 | 0.39 | 2.0e-17 | -6.1 | 1.09e-09 | 0.7 | FALSE |
| IC | Isyna1 | gene expression | Isyna1 | 0.13 | 1 | 0.07 | 1.0e-03 | 5.59 | 2.21e-08 | 0.08 | FALSE |
| IC | Map1s | gene expression | Map1s | 0.09 | 1581 | 0.05 | 3.3e-03 | -5.98 | 2.29e-09 | 0.46 | FALSE |
| IC | Niban3 | gene expression | Niban3 | 0.82 | 1528 | 0.59 | 1.8e-30 | 6.19 | 5.99e-10 | 0.75 | FALSE |
| IC | Rab8a | gene expression | Rab8a | 0.2 | 38 | 0.07 | 5.3e-04 | -5.64 | 1.69e-08 | 0.72 | FALSE |
| IC | Ddx49 | isoform ratio | NM_001115023.1 | 0.27 | 1 | 0.17 | 1.0e-07 | 5.33 | 9.91e-08 | 0.75 | FALSE |
| IC | Ddx49 | isoform ratio | XM_063275187.1 | 0.24 | 1 | 0.14 | 2.7e-06 | -5.33 | 9.91e-08 | 0.68 | FALSE |
| IC | Fam32a | isoform ratio | NM_001128078.2 | 0.8 | 10 | 0.38 | 4.4e-17 | 5.27 | 1.38e-07 | 0.41 | FALSE |
| IC | Niban3 | isoform ratio | XM_039094762.1 | 0.15 | 294 | 0.06 | 1.3e-03 | 5.28 | 1.29e-07 | 0.68 | FALSE |
| IC | Ushbp1 | isoform ratio | NM_001033687.1 | 0.1 | 13 | 0.04 | 6.9e-03 | -5.23 | 1.74e-07 | 0.31 | FALSE |
| IC | Ifi30 | mRNA stability | Ifi30 | 0.09 | 48 | 0.08 | 4.0e-04 | -5.93 | 3.04e-09 | 0.54 | FALSE |
| IC | Tmem59l | mRNA stability | Tmem59l | 0.04 | 9 | 0.04 | 1.2e-02 | 5.42 | 6.08e-08 | 0.38 | FALSE |
| IL | Niban3 | alternative TSS | XM_017600215.2 | 0.45 | 21 | 0.15 | 1.9e-04 | -5.49 | 4.03e-08 | 0.6 | FALSE |
| IL | Niban3 | alternative TSS | XM_039094762.1 | 0.36 | 22 | 0.14 | 3.2e-04 | 5.49 | 4.03e-08 | 0.57 | FALSE |
| IL | Niban3 | alternative TSS | XM_017600215.2 | 0.44 | 58 | 0.18 | 3.6e-05 | -5.49 | 4.03e-08 | 0.69 | TRUE |
| IL | Niban3 | alternative TSS | XM_039094762.1 | 0.41 | 1 | 0.18 | 3.5e-05 | 5.49 | 4.03e-08 | 0.09 | FALSE |
| IL | Comp | gene expression | Comp | 0.24 | 1 | 0.23 | 3.7e-06 | -5.31 | 1.12e-07 | 0.17 | FALSE |
| IL | Ifi30 | gene expression | Ifi30 | 0.33 | 1546 | 0.06 | 1.3e-02 | -6.24 | 4.49e-10 | 0.37 | FALSE |
| IL | Klhl26 | gene expression | Klhl26 | 0.19 | 51 | 0.13 | 4.9e-04 | -5.35 | 8.79e-08 | 0.5 | FALSE |
| IL | Niban3 | gene expression | Niban3 | 0.72 | 31 | 0.31 | 3.8e-08 | 5.32 | 1.03e-07 | 0.74 | FALSE |
| IL | Tmem59l | gene expression | Tmem59l | 0.32 | 1351 | 0.2 | 1.2e-05 | -5.36 | 8.48e-08 | 0.76 | FALSE |
| IL | Nr2c2ap | isoform ratio | NM_001399421.1 | 0.2 | 1 | 0.08 | 6.2e-03 | -5.45 | 5.05e-08 | 0.07 | FALSE |
| IL | Borcs8 | intron excision ratio | chr16_19312771_19314710 | 0.55 | 1 | 0.22 | 4.6e-06 | -5.45 | 5.05e-08 | 0.26 | FALSE |
| IL | Borcs8 | intron excision ratio | chr16_19312771_19314845 | 0.51 | 1 | 0.21 | 9.0e-06 | 5.45 | 5.05e-08 | 0.21 | FALSE |
| IL | Ddx49 | mRNA stability | Ddx49 | 0.16 | 1 | 0.05 | 2.5e-02 | -5.45 | 5.05e-08 | 0.08 | FALSE |
| IL | Nr2c2ap | mRNA stability | Nr2c2ap | 0.24 | 1 | 0.17 | 6.5e-05 | 5.27 | 1.37e-07 | 0.07 | FALSE |
| LHb | Mvb12a | alternative TSS | XM_063275152.1 | 0.28 | 1605 | 0.08 | 6.5e-03 | 5.95 | 2.75e-09 | 0.17 | FALSE |
| LHb | Niban3 | alternative TSS | XM_039094762.1 | 0.34 | 28 | 0.09 | 3.1e-03 | 5.46 | 4.76e-08 | 0.47 | FALSE |
| LHb | Znf431l5 | alternative TSS | NM_001409020.1 | 0.17 | 1 | 0.03 | 7.1e-02 | 5.49 | 3.92e-08 | 0.12 | FALSE |
| LHb | Ddx49 | gene expression | Ddx49 | 0.25 | 1 | 0.11 | 1.4e-03 | -5.33 | 9.91e-08 | 0.07 | FALSE |
| LHb | Ifi30 | gene expression | Ifi30 | 0.32 | 1546 | 0.11 | 1.3e-03 | -5.85 | 4.87e-09 | 0.14 | FALSE |
| LHb | Mvb12a | gene expression | Mvb12a | 0.3 | 129 | 0.08 | 7.3e-03 | -5.32 | 1.03e-07 | 0.42 | FALSE |
| LHb | Niban3 | gene expression | Niban3 | 0.53 | 1 | 0.15 | 2.2e-04 | 5.46 | 4.76e-08 | 0.1 | FALSE |
| LHb | Fam32a | isoform ratio | NM_001128078.2 | 0.71 | 441 | 0.27 | 3.2e-07 | 5.47 | 4.63e-08 | 0.53 | FALSE |
| Liver | Rfxank | alternative TSS | XM_039094487.2 | 0.09 | 34 | 0.07 | 3.0e-08 | -5.22 | 1.78e-07 | 0.81 | FALSE |
| Liver | Slc25a42 | alternative TSS | NM_001127590.1 | 0.28 | 1314 | 0.12 | 1.7e-13 | -5.84 | 5.27e-09 | 0.88 | FALSE |
| Liver | Slc25a42 | alternative TSS | XM_063275745.1 | 0.29 | 1314 | 0.13 | 3.9e-14 | 5.83 | 5.39e-09 | 0.88 | FALSE |
| Liver | Cist1 | gene expression | Cist1 | 0.03 | 1526 | 0.01 | 9.0e-03 | -5.54 | 3.02e-08 | 0.35 | FALSE |
| Liver | Fcho1 | gene expression | Fcho1 | 0.04 | 48 | 0.01 | 2.0e-02 | 5.63 | 1.78e-08 | 0.68 | FALSE |
| Liver | Jak3 | gene expression | Jak3 | 0.11 | 1449 | 0.08 | 1.3e-09 | 5.96 | 2.59e-09 | 0.21 | FALSE |
| Liver | Jund | gene expression | Jund | 0.02 | 1 | 0.01 | 1.3e-02 | -5.47 | 4.39e-08 | 0.04 | FALSE |
| Liver | Kcnn1 | gene expression | Kcnn1 | 0.19 | 1594 | 0.23 | 1.4e-25 | 5.56 | 2.65e-08 | 0.02 | FALSE |
| Liver | Kxd1 | gene expression | Kxd1 | 0.07 | 4 | 0.01 | 8.3e-03 | -5.81 | 6.10e-09 | 0.52 | FALSE |
| Liver | Lsm4 | gene expression | Lsm4 | 0.05 | 1 | 0.04 | 6.9e-05 | 5.5 | 3.70e-08 | 0.29 | FALSE |
| Liver | Map1s | gene expression | Map1s | 0.63 | 1581 | 0.28 | 3.7e-31 | 5.26 | 1.46e-07 | 0.01 | FALSE |
| Liver | Mk1 | gene expression | Mk1 | 0.03 | 1573 | 0.02 | 1.9e-03 | -6.29 | 3.22e-10 | 0.41 | FALSE |
| Liver | Pde4c | gene expression | Pde4c | 0.04 | 1526 | 0.03 | 7.0e-04 | -5.81 | 6.24e-09 | 0.27 | FALSE |
| Liver | Pgpep1 | gene expression | Pgpep1 | 0.06 | 1560 | 0.05 | 2.0e-06 | -6.24 | 4.29e-10 | 0.35 | FALSE |
| Liver | Poteml2 | gene expression | Poteml2 | 0.12 | 942 | 0.06 | 1.2e-07 | -5.24 | 1.60e-07 | 0.89 | FALSE |
| Liver | Jak3 | isoform ratio | NM_012855.2 | 0.03 | 1 | 0.02 | 3.9e-03 | 5.31 | 1.09e-07 | 0.04 | FALSE |
| Liver | LOC108348302 | isoform ratio | XM_063275932.1 | 0.04 | 1 | 0.03 | 6.0e-04 | -5.24 | 1.64e-07 | 0.07 | FALSE |
| Liver | Pgpep1 | isoform ratio | NM_201988.2 | 0.04 | 1560 | 0.02 | 2.1e-03 | 5.97 | 2.37e-09 | 0.2 | FALSE |
| Liver | Pgpep1 | isoform ratio | XM_063275159.1 | 0.04 | 1560 | 0.02 | 3.1e-03 | -5.75 | 8.92e-09 | 0.12 | FALSE |
| Liver | Uba52 | isoform ratio | NM_031687.3 | 0.08 | 58 | 0.01 | 7.1e-03 | -6.09 | 1.11e-09 | 0.34 | FALSE |
| Liver | Zfp869 | isoform ratio | XM_017600339.3 | 0.04 | 3 | 0.01 | 3.3e-02 | -5.3 | 1.18e-07 | 0.71 | FALSE |
| Liver | Colgalt1 | intron excision ratio | chr16_18354025_18354854 | 0.06 | 1510 | 0.03 | 2.0e-04 | -5.81 | 6.16e-09 | 0.72 | FALSE |
| Liver | Colgalt1 | intron excision ratio | chr16_18354964_18355594 | 0.06 | 1 | 0.03 | 1.3e-04 | 5.32 | 1.06e-07 | 0.1 | FALSE |
| Liver | Pde4c | intron excision ratio | chr16_18728642_18729014 | 0.05 | 1 | 0.03 | 1.3e-04 | -5.47 | 4.39e-08 | 0.23 | FALSE |
| Liver | Colgalt1 | mRNA stability | Colgalt1 | 0.08 | 1 | 0.08 | 5.8e-09 | 5.46 | 4.76e-08 | 0.77 | FALSE |
| Liver | Jak3 | mRNA stability | Jak3 | 0.03 | 50 | 0.02 | 1.9e-03 | 5.75 | 8.81e-09 | 0.47 | FALSE |
| Liver | Slc25a42 | mRNA stability | Slc25a42 | 0.05 | 1314 | 0.04 | 2.1e-05 | 5.3 | 1.17e-07 | 0.81 | FALSE |
| NAcc | Mast3 | alternative polyA | NM_001134796.1 | 0.02 | 9 | 0.02 | 1.2e-04 | 5.37 | 8.04e-08 | 0.34 | FALSE |
| NAcc | B3gnt3 | alternative TSS | XM_039094301.2 | 0.04 | 1 | 0.03 | 9.2e-06 | -5.44 | 5.29e-08 | 0.63 | FALSE |
| NAcc | Nr2c2ap | alternative TSS | NM_001399420.1 | 0.04 | 3 | 0.04 | 1.1e-06 | 5.45 | 4.92e-08 | 0.81 | FALSE |
| NAcc | Nr2c2ap | alternative TSS | XM_063275508.1 | 0.04 | 3 | 0.04 | 1.4e-06 | -5.45 | 4.92e-08 | 0.8 | FALSE |
| NAcc | Nr2c2ap | alternative TSS | NM_001399419.1 | 0.04 | 3 | 0.04 | 2.7e-06 | 5.45 | 4.92e-08 | 0.81 | FALSE |
| NAcc | Nr2c2ap | alternative TSS | XM_063275508.1 | 0.04 | 3 | 0.04 | 3.3e-06 | -5.45 | 4.92e-08 | 0.81 | FALSE |
| NAcc | Rfxank | alternative TSS | XM_006252899.5 | 0.08 | 1 | 0.03 | 6.6e-06 | 5.45 | 4.93e-08 | 0.76 | FALSE |
| NAcc | Slc25a42 | alternative TSS | NM_001127590.1 | 0.02 | 1 | 0.02 | 4.5e-04 | -5.38 | 7.33e-08 | 0.2 | FALSE |
| NAcc | Slc25a42 | alternative TSS | XM_063275745.1 | 0.02 | 1 | 0.02 | 3.2e-04 | 5.38 | 7.33e-08 | 0.26 | FALSE |
| NAcc | B3gnt3 | gene expression | B3gnt3 | 0.59 | 212 | 0.57 | 1.2e-106 | 5.28 | 1.32e-07 | 0.76 | FALSE |
| NAcc | Ifi30 | gene expression | Ifi30 | 0.29 | 18 | 0.32 | 2.3e-49 | -6.13 | 8.77e-10 | 0.61 | FALSE |
| NAcc | Jak3 | gene expression | Jak3 | 0.06 | 1 | 0.04 | 2.6e-07 | 5.23 | 1.73e-07 | 0.49 | FALSE |
| NAcc | Niban3 | gene expression | Niban3 | 0.71 | 175 | 0.76 | 3.1e-179 | 6.02 | 1.74e-09 | 0.75 | FALSE |
| NAcc | Tmem161a | gene expression | Tmem161a | 0.11 | 12 | 0.08 | 1.4e-12 | -5.3 | 1.15e-07 | 0.79 | FALSE |
| NAcc | Unc13a | gene expression | Unc13a | 0.19 | 1451 | 0.11 | 8.7e-17 | 6.15 | 7.98e-10 | 0.74 | FALSE |
| NAcc | Upf1 | gene expression | Upf1 | 0.03 | 1 | 0.03 | 2.2e-05 | -5.3 | 1.15e-07 | 0.55 | FALSE |
| NAcc | Ddx49 | isoform ratio | NM_001115023.1 | 0.1 | 27 | 0.06 | 8.4e-10 | 5.4 | 6.50e-08 | 0.9 | FALSE |
| NAcc | Ddx49 | isoform ratio | XM_063275187.1 | 0.09 | 40 | 0.05 | 7.2e-08 | -5.22 | 1.83e-07 | 0.9 | FALSE |
| NAcc | Nr2c2ap | isoform ratio | NM_001399419.1 | 0.06 | 1 | 0.03 | 6.9e-05 | 5.45 | 4.93e-08 | 0.58 | FALSE |
| NAcc | Nr2c2ap | isoform ratio | NM_001399421.1 | 0.06 | 18 | 0.03 | 1.3e-05 | -5.65 | 1.58e-08 | 0.81 | FALSE |
| NAcc | Nr2c2ap | isoform ratio | XM_063275508.1 | 0.05 | 3 | 0.05 | 1.3e-07 | -5.45 | 4.92e-08 | 0.81 | FALSE |
| NAcc | Rfxank | isoform ratio | XM_006252899.5 | 0.05 | 106 | 0.01 | 4.9e-03 | 5.47 | 4.45e-08 | 0.72 | TRUE |
| NAcc | Rfxank | isoform ratio | XM_039094487.2 | 0.08 | 1 | 0.04 | 1.1e-06 | -5.45 | 5.05e-08 | 0.86 | FALSE |
| NAcc | Unc13a | isoform ratio | XM_063275697.1 | 0.02 | 1 | 0.02 | 1.4e-03 | -5.46 | 4.76e-08 | 0.06 | FALSE |
| NAcc | Borcs8 | mRNA stability | Borcs8 | 0.03 | 1 | 0.03 | 1.9e-05 | 5.33 | 9.91e-08 | 0.5 | FALSE |
| NAcc | Colgalt1 | mRNA stability | Colgalt1 | 0.11 | 1 | 0.08 | 1.4e-11 | 5.33 | 9.58e-08 | 0.63 | FALSE |
| NAcc | Rfxank | mRNA stability | Rfxank | 0.04 | 138 | 0.03 | 2.0e-05 | -5.32 | 1.03e-07 | 0.78 | FALSE |
| NAcc | Tmem59l | mRNA stability | Tmem59l | 0.03 | 1 | 0.02 | 1.2e-04 | 5.42 | 6.07e-08 | 0.77 | FALSE |
| NAcc | Upf1 | mRNA stability | Upf1 | 0.12 | 53 | 0.08 | 1.2e-11 | 5.58 | 2.34e-08 | 0.9 | FALSE |
| OFC | Comp | gene expression | Comp | 0.83 | 73 | 0.37 | 9.0e-10 | -5.34 | 9.14e-08 | 0.88 | FALSE |
| OFC | Ifi30 | gene expression | Ifi30 | 0.29 | 1546 | 0.08 | 5.1e-03 | -5.75 | 9.08e-09 | 0.12 | FALSE |
| OFC | Niban3 | gene expression | Niban3 | 0.76 | 1528 | 0.21 | 1.0e-05 | 5.7 | 1.20e-08 | 0.71 | FALSE |
| OFC | Kxd1 | intron excision ratio | chr16_18936684_18943929 | 0.33 | 1 | 0.11 | 1.5e-03 | 5.27 | 1.37e-07 | 0.06 | FALSE |
| OFC | Mast3 | intron excision ratio | chr16_18695248_18695325 | 0.41 | 1539 | 0.22 | 6.9e-06 | 5.24 | 1.63e-07 | 0.02 | FALSE |
| OFC | Mast3 | intron excision ratio | chr16_18695506_18695977 | 0.41 | 1539 | 0.22 | 4.6e-06 | -5.24 | 1.60e-07 | 0.02 | FALSE |
| OFC | Uba52 | intron excision ratio | chr16_18936684_18943929 | 0.34 | 1 | 0.11 | 1.5e-03 | 5.27 | 1.37e-07 | 0.07 | FALSE |
| PL | Kcnn1 | alternative TSS | XM_063275662.1 | 0.02 | 1594 | 0.02 | 1.4e-03 | -5.61 | 1.99e-08 | 0.11 | FALSE |
| PL | Niban3 | alternative TSS | XM_017600215.2 | 0.13 | 1528 | 0.12 | 2.9e-13 | -5.81 | 6.13e-09 | 0.74 | FALSE |
| PL | Niban3 | alternative TSS | XM_039094762.1 | 0.12 | 61 | 0.12 | 2.2e-13 | 5.4 | 6.49e-08 | 0.75 | FALSE |
| PL | Niban3 | alternative TSS | XM_017600215.2 | 0.23 | 24 | 0.2 | 8.5e-22 | -5.24 | 1.57e-07 | 0.75 | FALSE |
| PL | Niban3 | alternative TSS | XM_039094762.1 | 0.2 | 39 | 0.22 | 3.2e-23 | 5.6 | 2.09e-08 | 0.74 | FALSE |
| PL | Slc25a42 | alternative TSS | NM_001127590.1 | 0.07 | 1 | 0.06 | 8.4e-07 | -5.27 | 1.37e-07 | 0.63 | FALSE |
| PL | Slc25a42 | alternative TSS | XM_063275745.1 | 0.07 | 1 | 0.06 | 1.0e-06 | 5.27 | 1.37e-07 | 0.61 | FALSE |
| PL | B3gnt3 | gene expression | B3gnt3 | 0.22 | 1 | 0.17 | 5.5e-18 | 5.44 | 5.29e-08 | 0.75 | FALSE |
| PL | Comp | gene expression | Comp | 0.36 | 16 | 0.28 | 2.7e-30 | -5.52 | 3.31e-08 | 0.92 | FALSE |
| PL | Ifi30 | gene expression | Ifi30 | 0.29 | 10 | 0.33 | 9.8e-37 | -5.99 | 2.09e-09 | 0.67 | FALSE |
| PL | Niban3 | gene expression | Niban3 | 0.72 | 47 | 0.66 | 3.6e-96 | 6.18 | 6.29e-10 | 0.76 | FALSE |
| PL | Nr2c2ap | gene expression | Nr2c2ap | 0.04 | 1 | 0.03 | 6.2e-04 | 5.55 | 2.78e-08 | 0.64 | FALSE |
| PL | Smim7 | gene expression | Smim7 | 0.07 | 9 | 0.05 | 6.8e-06 | -5.22 | 1.83e-07 | 0.14 | TRUE |
| PL | Fam32a | isoform ratio | NM_001128078.2 | 0.4 | 17 | 0.36 | 2.7e-41 | 5.26 | 1.44e-07 | 0.46 | FALSE |
| PL | Niban3 | isoform ratio | XM_039094762.1 | 0.1 | 6 | 0.09 | 1.6e-09 | 5.39 | 6.97e-08 | 0.75 | FALSE |
| PL | Nr2c2ap | isoform ratio | NM_001399421.1 | 0.05 | 1 | 0.03 | 1.1e-04 | -5.27 | 1.37e-07 | 0.26 | FALSE |
| PL | Unc13a | isoform ratio | XM_063275697.1 | 0.06 | 98 | 0.04 | 1.6e-05 | -5.45 | 4.97e-08 | 0.74 | FALSE |
| PL | Unc13a | isoform ratio | XM_063275702.1 | 0.07 | 1 | 0.06 | 1.2e-07 | 5.45 | 5.10e-08 | 0.74 | FALSE |
| PL | Borcs8 | intron excision ratio | chr16_19312771_19314845 | 0.05 | 1 | 0.05 | 2.6e-06 | 5.5 | 3.90e-08 | 0.88 | FALSE |
| PL | Jak3 | intron excision ratio | chr16_18425472_18427028 | 0.04 | 1 | 0.03 | 7.7e-04 | -5.22 | 1.76e-07 | 0.06 | FALSE |
| PL | Rfxank | intron excision ratio | chr16_19316681_19319936 | 0.02 | 1342 | 0.01 | 1.4e-02 | 5.56 | 2.73e-08 | 0.59 | FALSE |
| PL | Unc13a | intron excision ratio | chr16_18379955_18380405 | 0.34 | 72 | 0.06 | 2.7e-07 | 6.35 | 2.18e-10 | 0.74 | FALSE |
| PL | Homer3 | mRNA stability | Homer3 | 0.04 | 1 | 0.02 | 1.5e-03 | 5.31 | 1.12e-07 | 0.06 | FALSE |
| PL | Ifi30 | mRNA stability | Ifi30 | 0.04 | 1546 | 0.03 | 3.9e-04 | -5.81 | 6.34e-09 | 0.2 | FALSE |
| PL | Pik3r2 | mRNA stability | Pik3r2 | 0.11 | 1541 | 0.1 | 8.7e-11 | 5.43 | 5.76e-08 | 0.19 | FALSE |
| PL | Sugp2 | mRNA stability | Sugp2 | 0.08 | 29 | 0.04 | 1.1e-05 | -5.41 | 6.18e-08 | 0.31 | FALSE |
| PL | Upf1 | mRNA stability | Upf1 | 0.15 | 1 | 0.12 | 3.5e-13 | 5.55 | 2.78e-08 | 0.93 | FALSE |
| pVTA | B3gnt3 | alternative TSS | XM_039094301.2 | 0.08 | 1 | 0.03 | 8.4e-04 | -5.31 | 1.13e-07 | 0.05 | FALSE |
| pVTA | Jak3 | alternative TSS | XM_063275068.1 | 0.04 | 1 | 0.03 | 8.8e-04 | -5.23 | 1.69e-07 | 0.05 | FALSE |
| pVTA | Jak3 | alternative TSS | XM_063275068.1 | 0.04 | 1 | 0.04 | 4.4e-04 | -5.23 | 1.69e-07 | 0.05 | FALSE |
| pVTA | Niban3 | alternative TSS | XM_039094762.1 | 0.15 | 1 | 0.09 | 9.5e-08 | 5.23 | 1.73e-07 | 0.49 | FALSE |
| pVTA | Slc25a42 | alternative TSS | NM_001127590.1 | 0.07 | 1 | 0.04 | 1.7e-04 | -5.27 | 1.37e-07 | 0.28 | FALSE |
| pVTA | Slc25a42 | alternative TSS | XM_063275745.1 | 0.08 | 1 | 0.05 | 9.7e-05 | 5.27 | 1.37e-07 | 0.37 | FALSE |
| pVTA | Fcho1 | gene expression | Fcho1 | 0.16 | 1426 | 0.04 | 2.7e-04 | 6.24 | 4.27e-10 | 0.67 | FALSE |
| pVTA | Rex1bd | gene expression | Rex1bd | 0.05 | 50 | 0.05 | 1.1e-04 | 5.98 | 2.29e-09 | 0.33 | FALSE |
| pVTA | Ddx49 | isoform ratio | XM_063275187.1 | 0.39 | 1 | 0.18 | 8.5e-15 | -5.3 | 1.15e-07 | 0.76 | FALSE |
| pVTA | Jak3 | isoform ratio | NM_012855.2 | 0.03 | 1 | 0.02 | 9.0e-03 | 5.46 | 4.75e-08 | 0.05 | FALSE |
| pVTA | Borcs8 | intron excision ratio | chr16_19312771_19314845 | 0.34 | 18 | 0.21 | 1.7e-16 | 5.33 | 9.79e-08 | 0.79 | FALSE |
| pVTA | Mau2 | intron excision ratio | chr16_19418105_19428333 | 0.17 | 1 | 0.03 | 1.3e-03 | -5.39 | 6.87e-08 | 0.06 | FALSE |
| pVTA | Colgalt1 | mRNA stability | Colgalt1 | 0.18 | 1 | 0.14 | 1.4e-11 | 5.23 | 1.69e-07 | 0.5 | FALSE |
| pVTA | Ifi30 | mRNA stability | Ifi30 | 0.04 | 1546 | 0.04 | 7.3e-04 | -5.97 | 2.32e-09 | 0.28 | FALSE |
| pVTA | Nr2c2ap | mRNA stability | Nr2c2ap | 0.07 | 1 | 0.04 | 3.2e-04 | 5.48 | 4.14e-08 | 0.7 | FALSE |
| RMTg | Niban3 | alternative TSS | XM_039094762.1 | 0.12 | 1 | 0.11 | 7.8e-04 | 5.31 | 1.11e-07 | 0.05 | FALSE |
| RMTg | Niban3 | gene expression | Niban3 | 0.19 | 12 | 0.15 | 8.9e-05 | 5.64 | 1.70e-08 | 0.64 | FALSE |
| RMTg | Rab3a | gene expression | Rab3a | 0.11 | 1541 | 0.07 | 5.0e-03 | -6.05 | 1.44e-09 | 0.4 | FALSE |
| RMTg | Znf431l5 | gene expression | Znf431l5 | 0.17 | 1 | 0.12 | 5.1e-04 | 5.49 | 3.92e-08 | 0.34 | TRUE |