chr2:89,673,058-95,023,945

Trait: Tibialis anterior weight

Best TWAS P=1.70e-11 · Best GWAS P=7.14e-12 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Tpd52 alternative polyA ENSRNOT00000120271 0.05 1 0.02 3.4e-03 6.7 2.08e-11 0.04 FALSE
Adipose Tpd52 alternative polyA ENSRNOT00000099506 0.05 1 0.02 3.7e-03 -6.7 2.08e-11 0.04 FALSE
Adipose Tpd52 alternative polyA ENSRNOT00000120271 0.05 1 0.02 3.8e-03 6.7 2.08e-11 0.04 FALSE
Adipose Tpd52 alternative TSS ENSRNOT00000120271 0.04 1 0.01 1.0e-02 -6.47 9.93e-11 0.03 FALSE
Adipose Zbtb10 alternative TSS ENSRNOT00000081553 0.29 27 0.19 2.7e-20 -6.03 1.66e-09 0.57 FALSE
Adipose Zbtb10 alternative TSS ENSRNOT00000087598 0.28 16 0.19 2.6e-20 6 1.93e-09 0.57 FALSE
Adipose Snx16 gene expression ENSRNOG00000009953 0.11 157 0.06 1.2e-07 -5.3 1.18e-07 0 FALSE
Adipose Fabp12 gene expression ENSRNOG00000038825 0.14 1 0.08 3.2e-09 -5.62 1.95e-08 0.6 FALSE
Adipose Hey1 gene expression ENSRNOG00000062882 0.04 2629 0.02 5.5e-03 -5.64 1.74e-08 0.27 FALSE
Adipose Snx16 isoform ratio ENSRNOT00000083909 0.03 1 0.01 2.5e-02 5.66 1.49e-08 0.03 FALSE
Adipose Zbtb10 isoform ratio ENSRNOT00000081553 0.25 5 0.16 4.9e-17 -6.07 1.28e-09 0.55 FALSE
Adipose Zbtb10 isoform ratio ENSRNOT00000087598 0.23 2314 0.15 1.4e-16 6.15 7.61e-10 0.56 FALSE
Adipose Fabp4 mRNA stability ENSRNOG00000010805 0.05 1 0.03 3.2e-04 5.66 1.49e-08 0.1 FALSE
BLA Fabp4 gene expression ENSRNOG00000010805 0.41 10 0.24 2.8e-13 5.35 8.79e-08 0.47 FALSE
BLA Pmp2 gene expression ENSRNOG00000022707 0.1 1 0.08 5.9e-05 5.35 8.81e-08 0.48 FALSE
BLA ENSRNOG00000049075 gene expression ENSRNOG00000049075 0.2 2083 0.08 3.5e-05 5.48 4.24e-08 0.16 FALSE
BLA Zfp704 gene expression ENSRNOG00000054426 0.08 2020 0.03 7.8e-03 -5.65 1.60e-08 0.14 FALSE
BLA Pag1 gene expression ENSRNOG00000061328 0.06 1 0.01 1.2e-01 -5.37 7.92e-08 0.04 FALSE
BLA Hey1 gene expression ENSRNOG00000062882 0.07 1 0.03 1.5e-02 6.67 2.58e-11 0.04 FALSE
BLA ENSRNOG00000066286 gene expression ENSRNOG00000066286 0.06 20 0.02 2.0e-02 -5.46 4.82e-08 0.11 FALSE
BLA Slc10a5 gene expression ENSRNOG00000067758 0.16 1 0.08 5.3e-05 -5.55 2.78e-08 0.08 FALSE
BLA Snx16 isoform ratio ENSRNOT00000096600 0.1 1 0.04 2.8e-03 5.26 1.47e-07 0.04 FALSE
BLA Zfp704 mRNA stability ENSRNOG00000054426 0.08 2020 0.03 1.3e-02 -5.71 1.16e-08 0.17 FALSE
Brain Fabp4 gene expression ENSRNOG00000010805 0.18 1 0.1 6.0e-10 5.37 7.79e-08 0.29 FALSE
Brain ENSRNOG00000049075 gene expression ENSRNOG00000049075 0.23 1 0.15 6.3e-14 6.52 7.02e-11 0.85 FALSE
Brain Zfp704 gene expression ENSRNOG00000054426 0.03 1 0.01 2.3e-02 -6.7 2.15e-11 0.04 FALSE
Brain ENSRNOG00000066793 gene expression ENSRNOG00000066793 0.04 1 0.01 1.5e-02 -5.27 1.38e-07 0.03 FALSE
Brain Snx16 isoform ratio ENSRNOT00000083909 0.09 1 0.05 1.7e-05 5.27 1.38e-07 0.07 FALSE
Brain Tpd52 isoform ratio ENSRNOT00000117383 0.03 45 0 1.6e-01 5.53 3.27e-08 0.23 FALSE
Brain Tpd52 intron excision ratio chr2:92804650:92812941 0.04 2108 0.01 1.9e-02 6.06 1.33e-09 0.28 FALSE
Brain Tpd52 intron excision ratio chr2:92805700:92811676 0.04 1 0.01 1.5e-02 -6.73 1.70e-11 0.04 TRUE
Brain Zbtb10 intron excision ratio chr2:92498889:92508405 0.03 1 -0 4.5e-01 -6.53 6.69e-11 0.03 FALSE
Brain Mrps28 mRNA stability ENSRNOG00000032630 0.08 2057 0.03 1.8e-03 5.6 2.10e-08 0.34 FALSE
Brain Zfp704 mRNA stability ENSRNOG00000054426 0.07 1 0.05 2.6e-05 -6.54 6.34e-11 0.23 FALSE
IL Zc2hc1a alternative polyA ENSRNOT00000095126 0.29 2421 0.01 1.9e-01 -5.82 5.86e-09 0.25 FALSE
IL Zc2hc1a alternative polyA ENSRNOT00000109624 0.32 2421 0.02 1.3e-01 5.28 1.28e-07 0.18 FALSE
IL Zc2hc1a alternative polyA ENSRNOT00000095126 0.34 2421 0.02 9.7e-02 -5.66 1.49e-08 0.29 FALSE
IL Zc2hc1a alternative polyA ENSRNOT00000109624 0.3 2421 0.01 1.9e-01 5.67 1.42e-08 0.25 FALSE
IL Fabp4 gene expression ENSRNOG00000010805 0.76 6 0.17 5.7e-05 5.53 3.14e-08 0.6 FALSE
IL ENSRNOG00000049075 gene expression ENSRNOG00000049075 0.27 1 0.09 4.0e-03 5.35 9.00e-08 0.05 FALSE
IL Tpd52 mRNA stability ENSRNOG00000011441 0.3 1 0.12 7.2e-04 -6.72 1.85e-11 0.06 FALSE
Liver Zbtb10 alternative TSS ENSRNOT00000081553 0.11 1 0.04 3.4e-05 -5.34 9.12e-08 0.02 FALSE
Liver Zbtb10 alternative TSS ENSRNOT00000087598 0.09 1 0.04 6.9e-05 5.34 9.12e-08 0.03 FALSE
Liver ENSRNOG00000049075 gene expression ENSRNOG00000049075 0.04 8 0.02 1.4e-03 6.14 8.23e-10 0.35 FALSE
Liver Zbtb10 isoform ratio ENSRNOT00000081553 0.16 1 0.04 3.0e-05 -5.34 9.12e-08 0.02 FALSE
Liver Zbtb10 isoform ratio ENSRNOT00000087598 0.15 1 0.04 7.8e-05 5.34 9.12e-08 0.03 FALSE
Liver Mrps28 intron excision ratio chr2:92820902:92855850 0.17 2056 0.1 2.5e-11 -5.15 2.58e-07 0 FALSE
Liver Tpd52 mRNA stability ENSRNOG00000011441 0.07 1 0.04 7.4e-05 -6.7 2.08e-11 0.1 FALSE
NAcc Fabp4 gene expression ENSRNOG00000010805 0.1 19 0.03 4.4e-03 5.46 4.67e-08 0.54 FALSE
NAcc Pmp2 gene expression ENSRNOG00000022707 0.12 1916 0.06 1.5e-05 5.71 1.11e-08 0.56 FALSE
NAcc ENSRNOG00000049075 gene expression ENSRNOG00000049075 0.06 2081 0.02 1.6e-02 5.91 3.39e-09 0.45 FALSE
NAcc ENSRNOG00000066793 gene expression ENSRNOG00000066793 0.15 86 0.08 9.2e-07 -5.68 1.32e-08 0.18 FALSE
NAcc Snx16 isoform ratio ENSRNOT00000083909 0.07 39 0.01 3.4e-02 5.38 7.27e-08 0.39 FALSE
OFC Fabp4 gene expression ENSRNOG00000010805 0.43 1 0.08 7.4e-03 5.66 1.49e-08 0.06 FALSE
OFC Pmp2 gene expression ENSRNOG00000022707 0.31 17 0.03 7.2e-02 5.91 3.44e-09 0.13 FALSE
OFC Mrps28 gene expression ENSRNOG00000032630 0.44 1 0.11 1.5e-03 6.72 1.85e-11 0.06 FALSE
OFC ENSRNOG00000049075 gene expression ENSRNOG00000049075 0.37 1 0.08 6.3e-03 5.32 1.01e-07 0.05 FALSE
OFC Hey1 gene expression ENSRNOG00000062882 0.19 1 0.13 6.0e-04 6.5 7.95e-11 0.05 FALSE
PL Tpd52 alternative TSS ENSRNOT00000015327 0.06 2108 0.02 2.0e-02 6.52 7.13e-11 0.35 FALSE
PL Fabp4 gene expression ENSRNOG00000010805 0.57 207 0.27 6.5e-21 5.55 2.88e-08 0.68 FALSE
PL Pmp2 gene expression ENSRNOG00000022707 0.11 1 0.06 4.0e-05 5.69 1.30e-08 0.32 FALSE
PL Mrps28 gene expression ENSRNOG00000032630 0.18 1 0.06 1.2e-05 6.72 1.83e-11 0.38 FALSE
PL ENSRNOG00000049075 gene expression ENSRNOG00000049075 0.33 1 0.23 1.5e-17 5.4 6.84e-08 0.01 FALSE
PL Zbtb10 gene expression ENSRNOG00000061862 0.04 1 0 1.3e-01 6.73 1.71e-11 0.04 FALSE
PL Hey1 gene expression ENSRNOG00000062882 0.14 2629 0.06 2.3e-05 6.47 9.84e-11 0.55 FALSE
PL Slc10a5 gene expression ENSRNOG00000067758 0.06 1989 0.01 3.1e-02 -5.39 7.07e-08 0.35 FALSE
PL Tpd52 isoform ratio ENSRNOT00000077270 0.08 1 0.03 4.0e-03 6.56 5.37e-11 0.04 FALSE
PL tGap1 isoform ratio ENSRNOT00000082912 0.06 1 0.02 2.1e-02 -5.19 2.11e-07 0.04 FALSE
PL Snx16 intron excision ratio chr2:91354845:91356529 0.08 1 0.02 9.1e-03 -5.62 1.95e-08 0.05 FALSE