chr5:54,563,228-59,007,126

Trait: Tibialis anterior weight

Best TWAS P=5.35e-09 · Best GWAS P=2.67e-10 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Aptx alternative TSS ENSRNOT00000090891 0.03 2064 0.01 2.7e-02 -5.19 2.08e-07 0.52 FALSE
Adipose Aptx alternative TSS ENSRNOT00000115715 0.05 19 0.03 7.0e-04 5.1 3.46e-07 0.62 FALSE
Adipose Dnaja1 gene expression ENSRNOG00000007029 0.13 1 0.09 6.3e-10 5.15 2.63e-07 0.51 FALSE
Adipose Stoml2 gene expression ENSRNOG00000009535 0.03 13 0.01 9.5e-03 5.53 3.13e-08 0.56 FALSE
Adipose Nol6 gene expression ENSRNOG00000010409 0.05 1 0.03 1.7e-04 5.58 2.39e-08 0.1 FALSE
Adipose Ubap1 gene expression ENSRNOG00000012004 0.19 1 0.18 1.5e-19 -5.1 3.35e-07 0.1 FALSE
Adipose Galt gene expression ENSRNOG00000014766 0.23 4 0.24 1.4e-26 -5.24 1.59e-07 0.66 FALSE
Adipose Npr2 gene expression ENSRNOG00000015991 0.04 1828 0.01 2.3e-02 -5.26 1.48e-07 0.48 FALSE
Adipose Rgp1 gene expression ENSRNOG00000016309 0.02 1 0.01 2.1e-02 5.31 1.08e-07 0.03 FALSE
Adipose ENSRNOG00000022601 gene expression ENSRNOG00000022601 0.28 18 0.22 1.5e-23 -5.32 1.05e-07 0.68 FALSE
Adipose B4galt1 gene expression ENSRNOG00000059461 0.06 1 0.03 1.7e-04 5.13 2.84e-07 0.06 FALSE
Adipose ENSRNOG00000062709 gene expression ENSRNOG00000062709 0.33 2116 0.35 1.2e-39 -5.11 3.19e-07 0.68 FALSE
Adipose Aptx isoform ratio ENSRNOT00000046463 0.42 191 0.37 4.6e-43 -5.31 1.09e-07 0.75 FALSE
Adipose Aptx isoform ratio ENSRNOT00000094147 0.5 178 0.41 1.7e-49 5.42 5.82e-08 0.75 FALSE
Adipose Unc13b isoform ratio ENSRNOT00000078274 0.08 1658 0.07 1.6e-08 -5.33 9.75e-08 0.57 FALSE
Adipose Aptx intron excision ratio chr5:55811580:55813276 0.22 473 0.17 3.4e-18 -5.17 2.30e-07 0.73 FALSE
Adipose Aptx intron excision ratio chr5:55811580:55813754 0.59 251 0.41 1.8e-48 5.16 2.53e-07 0.73 FALSE
Adipose Aptx intron excision ratio chr5:55813800:55815552 0.04 1 0.03 1.3e-04 5.11 3.20e-07 0.07 FALSE
Adipose Galt intron excision ratio chr5:56927674:56927897 0.02 1 0.03 7.3e-04 -5.1 3.35e-07 0.03 FALSE
Adipose Galt intron excision ratio chr5:56927674:56927900 0.02 1 0.02 1.2e-03 5.1 3.35e-07 0.03 FALSE
Adipose Ddx58 mRNA stability ENSRNOG00000006384 0.06 1 0.03 2.6e-04 -5.15 2.63e-07 0.14 FALSE
Adipose Smu1 mRNA stability ENSRNOG00000007671 0.06 1 0.05 7.1e-06 -5.1 3.43e-07 0.33 FALSE
Adipose Ubap1 mRNA stability ENSRNOG00000012004 0.06 10 0.03 3.9e-04 5.35 8.71e-08 0.62 FALSE
Adipose Il11ra1 mRNA stability ENSRNOG00000015068 0.03 1 0.01 4.0e-02 -5.31 1.12e-07 0.03 FALSE
Adipose Atp8b5p mRNA stability ENSRNOG00000021704 0.07 1 0.06 2.6e-07 5.7 1.21e-08 0.79 FALSE
BLA Aptx gene expression ENSRNOG00000006582 0.38 109 0.21 2.4e-11 5.36 8.25e-08 0.76 FALSE
BLA Fam219a gene expression ENSRNOG00000039559 0.09 1288 0.06 2.9e-04 5.53 3.22e-08 0.62 FALSE
BLA Tmem215 gene expression ENSRNOG00000042246 0.19 1 0.15 1.3e-08 5.38 7.39e-08 0.75 FALSE
BLA ENSRNOG00000068351 gene expression ENSRNOG00000068351 0.06 1 0.03 1.3e-02 -5.46 4.69e-08 0.04 FALSE
BLA Smim27 gene expression ENSRNOG00000069822 0.06 2227 0.04 3.9e-03 -5.67 1.43e-08 0.36 FALSE
BLA Aptx isoform ratio ENSRNOT00000094147 0.76 90 0.55 6.3e-35 5.2 1.98e-07 0.75 FALSE
BLA Unc13b isoform ratio ENSRNOT00000078274 0.07 1 0.05 1.3e-03 -5.68 1.35e-08 0.05 FALSE
BLA Tpm2 isoform ratio ENSRNOT00000022801 0.12 1658 0.09 1.9e-05 5.37 7.93e-08 0.69 FALSE
BLA Aptx intron excision ratio chr5:55811580:55813276 0.16 2064 0.11 2.1e-06 -5.14 2.69e-07 0.54 FALSE
BLA Vcp mRNA stability ENSRNOG00000034242 0.06 1579 0.03 1.2e-02 5.48 4.22e-08 0.42 FALSE
Brain Ddx58 alternative TSS ENSRNOT00000060765 0.07 11 0.09 8.1e-09 -5.35 8.66e-08 0.2 FALSE
Brain Ddx58 alternative TSS ENSRNOT00000107881 0.07 11 0.09 9.8e-09 5.38 7.42e-08 0.22 FALSE
Brain Unc13b gene expression ENSRNOG00000008237 0.04 2 0.03 8.9e-04 5.69 1.25e-08 0.6 FALSE
Brain Nudt2 gene expression ENSRNOG00000013110 0.08 7 0.05 2.1e-05 -5.64 1.71e-08 0.73 FALSE
Brain Npr2 gene expression ENSRNOG00000015991 0.08 1 0.06 6.1e-06 5.7 1.18e-08 0.69 FALSE
Brain Ccdc107 gene expression ENSRNOG00000017253 0.09 1 0.09 1.7e-08 -5.31 1.10e-07 0.49 FALSE
Brain Atp8b5p gene expression ENSRNOG00000021704 0.14 44 0.14 9.4e-13 5.63 1.77e-08 0.72 FALSE
Brain Ccl21 gene expression ENSRNOG00000034290 0.05 6 0.03 1.1e-03 -5.31 1.08e-07 0.47 FALSE
Brain Fam219a gene expression ENSRNOG00000039559 0.04 1 0.02 3.7e-03 5.62 1.96e-08 0.05 FALSE
Brain Tmem215 gene expression ENSRNOG00000042246 0.27 1 0.22 3.8e-20 5.2 2.01e-07 0.54 FALSE
Brain Dcaf12 gene expression ENSRNOG00000050790 0.28 1 0.15 3.6e-14 5.3 1.15e-07 0.25 FALSE
Brain Aptx isoform ratio ENSRNOT00000046463 0.48 1 0.44 5.9e-44 -5.69 1.27e-08 0.95 FALSE
Brain Aptx isoform ratio ENSRNOT00000094147 0.54 1 0.47 4.0e-49 5.32 1.04e-07 0.72 FALSE
Brain Unc13b isoform ratio ENSRNOT00000078274 0.1 1 0.08 4.8e-08 -5.7 1.18e-08 0.78 FALSE
Brain Aptx intron excision ratio chr5:55811580:55813276 0.1 1 0.07 7.8e-07 -5.27 1.34e-07 0.66 FALSE
Brain Fam214b intron excision ratio chr5:57265299:57268368 0.05 1 0.04 8.0e-05 -5.61 2.06e-08 0.24 FALSE
Brain Phf24 mRNA stability ENSRNOG00000000129 0.38 1 0.27 3.2e-25 -5.64 1.67e-08 0.61 FALSE
Brain Unc13b mRNA stability ENSRNOG00000008237 0.2 9 0.18 3.8e-16 -5.3 1.13e-07 0.61 FALSE
Brain Fam214b mRNA stability ENSRNOG00000009323 0.03 1 0.03 1.5e-03 5.69 1.30e-08 0.04 FALSE
Brain Pigo mRNA stability ENSRNOG00000009930 0.08 4 0.06 4.0e-06 5.1 3.34e-07 0.39 FALSE
Brain Ccdc107 mRNA stability ENSRNOG00000017253 0.1 1617 0.13 5.4e-12 5.23 1.73e-07 0.71 FALSE
Brain Tesk1 mRNA stability ENSRNOG00000053729 0.08 18 0.09 1.3e-08 5.28 1.29e-07 0.47 FALSE
Eye Ccl19 alternative polyA ENSRNOT00000020982 0.29 1 0.11 1.1e-02 -5.6 2.18e-08 0.06 FALSE
Eye Ccl19 alternative polyA ENSRNOT00000101776 0.33 1 0.12 7.1e-03 5.6 2.18e-08 0.06 FALSE
Eye Ddx58 gene expression ENSRNOG00000006384 0.37 1 0.23 2.3e-04 -5.2 2.01e-07 0.06 FALSE
Eye Nudt2 gene expression ENSRNOG00000013110 0.37 1 0.19 6.8e-04 -5.84 5.35e-09 0.07 TRUE
Eye Tmem215 gene expression ENSRNOG00000042246 0.27 1 0.21 3.2e-04 5.18 2.17e-07 0.06 FALSE
Eye Gne isoform ratio ENSRNOT00000115719 0.62 24 0.27 4.4e-05 5.17 2.32e-07 0.42 FALSE
Eye Aptx intron excision ratio chr5:55811580:55813754 0.86 158 0.24 1.5e-04 5.16 2.40e-07 0.42 FALSE
Eye Fam214b mRNA stability ENSRNOG00000009323 0.33 1 0.11 1.0e-02 5.62 1.96e-08 0.06 FALSE
Eye Ccdc107 mRNA stability ENSRNOG00000017253 0.35 65 0.16 2.0e-03 5.55 2.82e-08 0.39 FALSE
IL Phf24 gene expression ENSRNOG00000000129 0.17 6 0.14 2.6e-04 5.8 6.65e-09 0.5 FALSE
IL Ccl21 gene expression ENSRNOG00000034290 0.31 1 0.26 5.3e-07 -5.62 1.90e-08 0.18 FALSE
IL ENSRNOG00000068351 gene expression ENSRNOG00000068351 0.15 1344 0.1 2.0e-03 -5.52 3.33e-08 0.5 FALSE
IL Unc13b isoform ratio ENSRNOT00000078274 0.29 4 0.27 4.0e-07 -5.14 2.70e-07 0.51 FALSE
IL Phf24 mRNA stability ENSRNOG00000000129 0.19 9 0.12 1.1e-03 -5.58 2.36e-08 0.48 FALSE
IL Gne mRNA stability ENSRNOG00000014365 0.41 6 0.35 3.3e-09 -5.2 2.00e-07 0.67 FALSE
LHb Aco1 gene expression ENSRNOG00000005849 0.21 2235 0.08 6.5e-03 5.28 1.31e-07 0.23 FALSE
LHb Ddx58 gene expression ENSRNOG00000006384 0.34 1 0.19 2.5e-05 -5.39 7.19e-08 0.09 FALSE
LHb Tmem215 gene expression ENSRNOG00000042246 0.18 1 0.06 1.6e-02 5.1 3.45e-07 0.05 FALSE
Liver Aptx alternative TSS ENSRNOT00000046463 0.05 1 0.02 4.0e-03 5.12 3.07e-07 0.1 FALSE
Liver Pigo gene expression ENSRNOG00000009930 0.1 43 0.11 1.1e-11 5.22 1.77e-07 0.05 FALSE
Liver Ccdc107 gene expression ENSRNOG00000017253 0.26 67 0.18 1.1e-19 -5.34 9.52e-08 0.75 FALSE
Liver Atp8b5p gene expression ENSRNOG00000021704 0.42 516 0.38 7.5e-45 5.14 2.74e-07 0.71 FALSE
Liver Ccl21 gene expression ENSRNOG00000034290 0.09 1 0.08 4.7e-09 5.49 3.94e-08 0.39 FALSE
Liver Dcaf12 gene expression ENSRNOG00000050790 0.04 46 0.02 2.0e-03 5.42 5.82e-08 0.68 FALSE
Liver ENSRNOG00000063741 gene expression ENSRNOG00000063741 0.13 375 0.09 3.5e-10 -5.55 2.86e-08 0.78 FALSE
Liver Smim27 gene expression ENSRNOG00000069822 0.03 1 0.03 3.1e-04 -5.1 3.37e-07 0.04 FALSE
Liver Ccl27 isoform ratio ENSRNOT00000060594 0.13 54 0.13 8.2e-14 -5.37 7.85e-08 0.4 FALSE
Liver Ddx58 intron excision ratio chr5:55347696:55349132 0.04 2296 0.03 7.9e-04 5.67 1.40e-08 0.48 FALSE
Liver Aptx intron excision ratio chr5:55811580:55813276 0.07 1 0.06 8.7e-07 -5.58 2.39e-08 0.9 FALSE
Liver Aptx intron excision ratio chr5:55811580:55813754 0.54 222 0.45 9.1e-56 5.31 1.09e-07 0.75 FALSE
Liver Aptx intron excision ratio chr5:55813542:55813754 0.08 1 0.06 3.4e-07 -5.11 3.20e-07 0.4 FALSE
Liver Atp8b5p intron excision ratio chr5:57583252:57586245 0.03 1578 0.02 2.3e-03 -5.14 2.69e-07 0.55 FALSE
Liver Ddx58 mRNA stability ENSRNOG00000006384 0.04 2296 0.01 1.2e-02 5.65 1.57e-08 0.41 FALSE
Liver Atp8b5p mRNA stability ENSRNOG00000021704 0.16 11 0.15 1.5e-16 5.25 1.51e-07 0.67 FALSE
Liver Vcp mRNA stability ENSRNOG00000034242 0.03 3 0.02 1.1e-03 -5.46 4.88e-08 0.45 FALSE
NAcc Aptx gene expression ENSRNOG00000006582 0.13 1 0.12 1.8e-09 5.39 7.00e-08 0.79 FALSE
NAcc Gba2 gene expression ENSRNOG00000016364 0.05 1803 0.05 9.9e-05 -5.26 1.45e-07 0.64 FALSE
NAcc Ca9 gene expression ENSRNOG00000017073 0.08 1640 0.09 6.7e-07 -5.4 6.57e-08 0.75 FALSE
NAcc Arhgef39 gene expression ENSRNOG00000021433 0.06 1621 0.05 1.7e-04 5.14 2.74e-07 0.55 FALSE
NAcc Atp8b5p gene expression ENSRNOG00000021704 0.14 20 0.16 6.7e-12 5.39 7.01e-08 0.57 FALSE
NAcc Aptx isoform ratio ENSRNOT00000046463 0.28 1 0.18 1.1e-13 -5.38 7.55e-08 0.77 FALSE
NAcc Aptx isoform ratio ENSRNOT00000094147 0.58 24 0.46 2.2e-37 5.4 6.64e-08 0.8 FALSE
NAcc Unc13b isoform ratio ENSRNOT00000078274 0.1 1657 0.1 5.4e-08 -5.43 5.68e-08 0.58 FALSE
NAcc Aptx intron excision ratio chr5:55811580:55813276 0.08 3 0.06 5.9e-05 -5.63 1.82e-08 0.69 FALSE
NAcc Phf24 mRNA stability ENSRNOG00000000129 0.06 1 0.04 3.1e-04 -5.46 4.69e-08 0.1 FALSE
NAcc Vcp mRNA stability ENSRNOG00000034242 0.03 1 0.01 5.4e-02 5.49 3.94e-08 0.04 FALSE
NAcc Rusc2 mRNA stability ENSRNOG00000045843 0.04 1624 0.01 4.8e-02 -5.3 1.17e-07 0.54 FALSE
OFC Ddx58 gene expression ENSRNOG00000006384 0.44 1 0.34 6.6e-09 -5.13 2.93e-07 0.18 FALSE
OFC Unc13b isoform ratio ENSRNOT00000078274 0.2 1 0.09 4.2e-03 -5.61 2.04e-08 0.06 FALSE
PL Ddx58 alternative TSS ENSRNOT00000107881 0.08 2295 0.09 2.2e-07 5.46 4.79e-08 0.2 FALSE
PL Ddx58 alternative TSS ENSRNOT00000107968 0.08 2295 0.09 1.7e-07 -5.5 3.83e-08 0.22 FALSE
PL Ddx58 alternative TSS ENSRNOT00000060765 0.1 2295 0.1 4.2e-08 -5.61 2.06e-08 0.24 FALSE
PL Ddx58 alternative TSS ENSRNOT00000107881 0.1 2295 0.1 4.1e-08 5.59 2.28e-08 0.23 FALSE
PL Aco1 gene expression ENSRNOG00000005849 0.04 1 0.04 9.2e-04 5.37 7.95e-08 0.15 FALSE
PL Ubap1 gene expression ENSRNOG00000012004 0.06 1181 0.03 1.6e-03 5.5 3.91e-08 0.72 FALSE
PL Tmem8b gene expression ENSRNOG00000015664 0.07 1819 0.06 1.1e-05 -5.1 3.35e-07 0.54 FALSE
PL Cd72 gene expression ENSRNOG00000017485 0.05 1607 0.04 3.2e-04 5.36 8.24e-08 0.65 FALSE
PL Atp8b5p gene expression ENSRNOG00000021704 0.09 5 0.08 1.7e-06 5.22 1.76e-07 0.49 FALSE
PL Ccl21 gene expression ENSRNOG00000034290 0.13 24 0.14 6.6e-11 -5.82 5.83e-09 0.63 FALSE
PL Tmem215 gene expression ENSRNOG00000042246 0.14 2153 0.15 2.4e-11 5.54 3.01e-08 0.64 FALSE
PL Dcaf12 gene expression ENSRNOG00000050790 0.05 1 0.03 3.4e-03 5.58 2.40e-08 0.05 FALSE
PL ENSRNOG00000068351 gene expression ENSRNOG00000068351 0.16 91 0.17 1.3e-12 -5.32 1.07e-07 0.56 FALSE
PL Ddx58 isoform ratio ENSRNOT00000060765 0.05 2295 0.05 1.2e-04 -5.25 1.50e-07 0.18 FALSE
PL Ddx58 isoform ratio ENSRNOT00000107881 0.09 2295 0.1 2.8e-08 5.3 1.14e-07 0.09 FALSE
PL Aptx isoform ratio ENSRNOT00000046463 0.33 1 0.14 8.5e-11 -5.37 7.95e-08 0.76 FALSE
PL Aptx isoform ratio ENSRNOT00000094147 0.6 1 0.47 3.5e-39 5.37 7.95e-08 0.76 FALSE
PL Unc13b isoform ratio ENSRNOT00000067281 0.11 23 0.1 2.5e-08 5.63 1.80e-08 0.66 FALSE
PL Unc13b isoform ratio ENSRNOT00000078274 0.15 1 0.15 9.2e-12 -5.61 2.02e-08 0.68 FALSE
PL Aptx intron excision ratio chr5:55811580:55813276 0.12 1 0.09 3.2e-07 -5.12 3.07e-07 0.46 FALSE
PL Unc13b intron excision ratio chr5:57363638:57406741 0.05 1 0.05 7.4e-05 5.67 1.43e-08 0.12 FALSE
PL Galt intron excision ratio chr5:56928114:56928234 0.04 1 0.03 2.5e-03 -5.62 1.90e-08 0.04 FALSE
PL Galt intron excision ratio chr5:56928114:56928488 0.07 1 0.07 6.8e-06 5.76 8.35e-09 0.52 FALSE
PL Reck intron excision ratio chr5:58159526:58162559 0.05 1 0.03 1.4e-03 5.47 4.50e-08 0.08 FALSE
PL Smu1 mRNA stability ENSRNOG00000007671 0.11 1 0.1 3.8e-08 -5.7 1.21e-08 0.95 FALSE
PL Unc13b mRNA stability ENSRNOG00000008237 0.1 1 0.1 3.9e-08 -5.46 4.69e-08 0.48 FALSE
PL Pigo mRNA stability ENSRNOG00000009930 0.08 4 0.08 1.1e-06 5.19 2.13e-07 0.52 FALSE
PL Tesk1 mRNA stability ENSRNOG00000053729 0.07 1628 0.07 5.8e-06 5.33 9.57e-08 0.64 FALSE