Best TWAS P=3.72e-09 · Best GWAS P=1.19e-08 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Alg6 | alternative polyA | XM_039110268.1 | 0.04 | 1789 | 0.03 | 7.2e-04 | -5.31 | 1.08e-07 | 0.35 | FALSE |
Adipose | Alg6 | alternative polyA | XM_039110269.1 | 0.04 | 1789 | 0.03 | 8.6e-04 | 5.33 | 9.76e-08 | 0.35 | FALSE |
Adipose | LOC120103114 | alternative polyA | XR_005505180.1 | 0.15 | 1422 | 0.1 | 1.4e-11 | -5.27 | 1.36e-07 | 0.39 | FALSE |
Adipose | LOC120103114 | alternative polyA | XR_005505181.1 | 0.15 | 1422 | 0.11 | 9.0e-12 | 5.27 | 1.39e-07 | 0.39 | FALSE |
Adipose | LOC120103114 | alternative polyA | XR_005505180.1 | 0.15 | 1422 | 0.1 | 2.1e-11 | -5.26 | 1.44e-07 | 0.39 | FALSE |
Adipose | LOC120103114 | alternative polyA | XR_005505181.1 | 0.15 | 1422 | 0.1 | 2.4e-11 | 5.26 | 1.44e-07 | 0.39 | FALSE |
Adipose | Patj | alternative polyA | XM_008763915.3 | 0.06 | 1 | 0.03 | 1.4e-04 | 5.19 | 2.11e-07 | 0.08 | FALSE |
Adipose | Patj | alternative polyA | XM_039109187.1 | 0.04 | 1 | 0.02 | 2.2e-03 | -5.2 | 2.04e-07 | 0.04 | FALSE |
Adipose | Itgb3bp | alternative TSS | XM_039110281.1 | 0.14 | 1 | 0.04 | 3.6e-05 | -5.52 | 3.46e-08 | 0.25 | FALSE |
Adipose | Patj | alternative TSS | NM_080398.1 | 0.03 | 1369 | 0.01 | 7.8e-03 | 5.24 | 1.61e-07 | 0.31 | FALSE |
Adipose | Atg4c | gene expression | Atg4c | 0.29 | 1602 | 0.14 | 1.9e-15 | -5.3 | 1.14e-07 | 0.4 | FALSE |
Adipose | Dock7 | gene expression | Dock7 | 0.34 | 128 | 0.27 | 4.6e-30 | -5.3 | 1.18e-07 | 0.37 | FALSE |
Adipose | Kank4 | gene expression | Kank4 | 0.21 | 283 | 0.07 | 1.9e-08 | -5.2 | 1.98e-07 | 0.4 | FALSE |
Adipose | LOC685453 | gene expression | LOC685453 | 0.16 | 1577 | 0.09 | 2.5e-10 | 5.3 | 1.13e-07 | 0.39 | FALSE |
Adipose | Alg6 | isoform ratio | XM_039110269.1 | 0.04 | 4 | 0.03 | 3.6e-04 | 5.9 | 3.72e-09 | 0.35 | TRUE |
Adipose | Atg4c | isoform ratio | XM_039109912.1 | 0.03 | 1 | 0.01 | 4.4e-02 | -5.25 | 1.52e-07 | 0.03 | FALSE |
Adipose | Atg4c | isoform ratio | XM_039109913.1 | 0.03 | 1 | 0.01 | 2.3e-02 | 5.25 | 1.53e-07 | 0.03 | FALSE |
Adipose | LOC120103114 | isoform ratio | XR_005505181.1 | 0.05 | 1 | 0.02 | 3.3e-03 | -5.67 | 1.44e-08 | 0.13 | FALSE |
Adipose | Patj | isoform ratio | XM_008763915.3 | 0.05 | 1369 | 0.02 | 1.2e-03 | -5.24 | 1.62e-07 | 0.41 | FALSE |
Adipose | Itgb3bp | intron excision ratio | chr5_114510313_114512559 | 0.07 | 1 | 0.04 | 3.6e-05 | 5.21 | 1.88e-07 | 0.07 | FALSE |
Adipose | Itgb3bp | intron excision ratio | chr5_114510313_114525205 | 0.07 | 1 | 0.04 | 2.9e-05 | -5.21 | 1.88e-07 | 0.08 | FALSE |
Adipose | Atg4c | mRNA stability | Atg4c | 0.17 | 1602 | 0.08 | 6.1e-09 | -5.29 | 1.25e-07 | 0.39 | FALSE |
BLA | Alg6 | alternative polyA | XM_039110268.1 | 0.04 | 1 | 0.02 | 2.5e-02 | 5.26 | 1.44e-07 | 0.04 | FALSE |
BLA | Alg6 | alternative polyA | XM_039110269.1 | 0.04 | 1 | 0.03 | 1.7e-02 | -5.26 | 1.44e-07 | 0.04 | FALSE |
BLA | LOC120103114 | alternative polyA | XR_005505180.1 | 0.16 | 12 | 0.13 | 1.5e-07 | -5.43 | 5.57e-08 | 0.42 | FALSE |
BLA | LOC120103114 | alternative polyA | XR_005505180.1 | 0.15 | 1 | 0.12 | 6.1e-07 | 5.3 | 1.13e-07 | 0.43 | FALSE |
BLA | Nfia | alternative TSS | XM_039109303.1 | 0.06 | 1427 | 0.03 | 7.3e-03 | 5.22 | 1.76e-07 | 0.3 | FALSE |
BLA | Atg4c | gene expression | Atg4c | 0.43 | 1602 | 0.42 | 3.1e-24 | -5.26 | 1.45e-07 | 0.41 | FALSE |
BLA | Dock7 | gene expression | Dock7 | 0.26 | 205 | 0.26 | 2.5e-14 | -5.29 | 1.21e-07 | 0.4 | FALSE |
BLA | Kank4 | gene expression | Kank4 | 0.17 | 1478 | 0.15 | 1.7e-08 | 5.21 | 1.94e-07 | 0.4 | FALSE |
BLA | LOC120103114 | gene expression | LOC120103114 | 0.39 | 16 | 0.46 | 3.7e-27 | -5.41 | 6.26e-08 | 0.38 | FALSE |
BLA | LOC685453 | gene expression | LOC685453 | 0.08 | 1577 | 0.05 | 8.8e-04 | 5.28 | 1.29e-07 | 0.38 | FALSE |
BLA | Patj | gene expression | Patj | 0.05 | 15 | 0.03 | 9.7e-03 | -5.19 | 2.08e-07 | 0.34 | FALSE |
BLA | Itgb3bp | isoform ratio | XM_039110275.1 | 0.06 | 1 | 0.05 | 8.6e-04 | 5.44 | 5.45e-08 | 0.06 | FALSE |
BLA | Itgb3bp | isoform ratio | XM_039110277.1 | 0.05 | 1864 | 0.02 | 3.6e-02 | -5.44 | 5.25e-08 | 0.37 | FALSE |
BLA | LOC120103114 | isoform ratio | XR_005505179.1 | 0.11 | 1422 | 0.07 | 1.3e-04 | -5.36 | 8.20e-08 | 0.42 | FALSE |
BLA | Atg4c | intron excision ratio | chr5_113915345_113934140 | 0.09 | 1 | 0.05 | 1.5e-03 | 5.3 | 1.13e-07 | 0.04 | FALSE |
BLA | Itgb3bp | intron excision ratio | chr5_114460416_114462412 | 0.09 | 1864 | 0.1 | 8.0e-06 | -5.36 | 8.50e-08 | 0.4 | FALSE |
BLA | Itgb3bp | intron excision ratio | chr5_114460416_114473633 | 0.52 | 60 | 0.5 | 3.5e-30 | -5.3 | 1.13e-07 | 0.33 | FALSE |
BLA | Itgb3bp | intron excision ratio | chr5_114510313_114525205 | 0.07 | 1 | 0.07 | 1.1e-04 | -5.27 | 1.39e-07 | 0.06 | FALSE |
BLA | LOC102553524 | intron excision ratio | chr5_112231241_112246302 | 0.08 | 1562 | 0.06 | 5.5e-04 | -5.48 | 4.33e-08 | 0.38 | FALSE |
BLA | Atg4c | mRNA stability | Atg4c | 0.09 | 1602 | 0.06 | 5.6e-04 | 5.25 | 1.54e-07 | 0.36 | FALSE |
BLA | Dock7 | mRNA stability | Dock7 | 0.12 | 1606 | 0.12 | 8.4e-07 | -5.24 | 1.57e-07 | 0.38 | FALSE |
BLA | LOC120103114 | mRNA stability | LOC120103114 | 0.15 | 144 | 0.22 | 9.6e-12 | 5.53 | 3.12e-08 | 0.38 | FALSE |
Brain | Alg6 | alternative polyA | XM_039110268.1 | 0.08 | 1791 | 0.11 | 2.8e-10 | -5.4 | 6.49e-08 | 0.35 | FALSE |
Brain | Alg6 | alternative polyA | XM_039110269.1 | 0.08 | 1791 | 0.11 | 2.7e-10 | 5.4 | 6.62e-08 | 0.35 | FALSE |
Brain | LOC120103114 | alternative polyA | XR_005505180.1 | 0.14 | 1422 | 0.15 | 5.2e-14 | -5.17 | 2.28e-07 | 0.36 | FALSE |
Brain | LOC120103114 | alternative polyA | XR_005505180.1 | 0.13 | 1422 | 0.14 | 3.6e-13 | -5.19 | 2.09e-07 | 0.36 | FALSE |
Brain | LOC120103114 | alternative polyA | XR_005505181.1 | 0.13 | 1422 | 0.14 | 7.7e-13 | 5.18 | 2.22e-07 | 0.36 | FALSE |
Brain | Nfia | alternative polyA | NM_012988.2 | 0.03 | 1 | 0.03 | 1.9e-03 | 5.3 | 1.17e-07 | 0.05 | FALSE |
Brain | Nfia | alternative polyA | XM_039109300.1 | 0.03 | 1 | 0.02 | 2.4e-03 | -5.3 | 1.17e-07 | 0.05 | FALSE |
Brain | Nfia | alternative polyA | NM_012988.2 | 0.03 | 1 | 0.02 | 2.5e-03 | 5.3 | 1.17e-07 | 0.05 | FALSE |
Brain | Nfia | alternative polyA | XM_039109300.1 | 0.03 | 1 | 0.02 | 2.4e-03 | -5.3 | 1.17e-07 | 0.05 | FALSE |
Brain | Tm2d1 | alternative TSS | NM_001108670.2 | 0.04 | 1 | 0.04 | 1.7e-04 | 5.3 | 1.13e-07 | 0.08 | FALSE |
Brain | Atg4c | gene expression | Atg4c | 0.86 | 139 | 0.52 | 9.6e-56 | -5.23 | 1.66e-07 | 0.38 | FALSE |
Brain | Dock7 | gene expression | Dock7 | 0.7 | 1606 | 0.57 | 1.6e-64 | 5.2 | 2.03e-07 | 0.36 | FALSE |
Brain | L1td1 | gene expression | L1td1 | 0.15 | 1 | 0.13 | 1.1e-11 | 5.18 | 2.18e-07 | 0.4 | FALSE |
Brain | LOC102556219 | gene expression | LOC102556219 | 0.04 | 1583 | 0.03 | 7.7e-04 | 5.28 | 1.29e-07 | 0.38 | FALSE |
Brain | LOC120103113 | gene expression | LOC120103113 | 0.03 | 1 | 0.02 | 3.9e-03 | 5.24 | 1.59e-07 | 0.04 | FALSE |
Brain | LOC120103114 | gene expression | LOC120103114 | 0.55 | 42 | 0.62 | 2.4e-73 | -5.21 | 1.93e-07 | 0.35 | FALSE |
Brain | LOC685453 | gene expression | LOC685453 | 0.17 | 41 | 0.2 | 3.5e-18 | 5.3 | 1.17e-07 | 0.39 | FALSE |
Brain | Patj | gene expression | Patj | 0.33 | 1 | 0.34 | 5.0e-32 | -5.22 | 1.76e-07 | 0.49 | FALSE |
Brain | Ror1 | gene expression | Ror1 | 0.09 | 1 | 0.07 | 9.7e-07 | -5.4 | 6.75e-08 | 0.48 | FALSE |
Brain | Atg4c | isoform ratio | NM_001107948.1 | 0.05 | 1 | 0.03 | 1.2e-03 | -5.18 | 2.18e-07 | 0.04 | FALSE |
Brain | Atg4c | isoform ratio | XM_039109913.1 | 0.03 | 1602 | 0.02 | 3.8e-03 | -5.27 | 1.35e-07 | 0.34 | FALSE |
Brain | Itgb3bp | isoform ratio | NM_001013213.1 | 0.1 | 1 | 0.06 | 2.9e-06 | 5.26 | 1.43e-07 | 0.28 | FALSE |
Brain | Itgb3bp | isoform ratio | XM_039110277.1 | 0.05 | 1864 | 0.05 | 1.5e-05 | -5.49 | 4.04e-08 | 0.39 | FALSE |
Brain | Itgb3bp | isoform ratio | XM_039110283.1 | 0.04 | 5 | 0.04 | 5.2e-05 | 5.3 | 1.14e-07 | 0.36 | FALSE |
Brain | LOC102553524 | isoform ratio | XR_354158.4 | 0.09 | 1 | 0.1 | 6.7e-10 | 5.35 | 8.68e-08 | 0.58 | FALSE |
Brain | Nfia | isoform ratio | NM_012988.2 | 0.03 | 1 | 0.04 | 1.1e-04 | 5.3 | 1.17e-07 | 0.06 | FALSE |
Brain | Tm2d1 | isoform ratio | NM_001108670.2 | 0.05 | 1 | 0.04 | 1.3e-04 | 5.26 | 1.40e-07 | 0.09 | FALSE |
Brain | Atg4c | intron excision ratio | chr5_113915345_113934140 | 0.04 | 1602 | 0.02 | 5.3e-03 | 5.26 | 1.47e-07 | 0.31 | FALSE |
Brain | Itgb3bp | intron excision ratio | chr5_114460416_114462412 | 0.24 | 1 | 0.27 | 8.5e-25 | 5.19 | 2.10e-07 | 0.27 | FALSE |
Brain | Itgb3bp | intron excision ratio | chr5_114460416_114473633 | 0.68 | 30 | 0.56 | 2.1e-62 | -5.44 | 5.39e-08 | 0.33 | FALSE |
Brain | Itgb3bp | intron excision ratio | chr5_114462459_114473633 | 0.51 | 1 | 0.17 | 7.6e-16 | 5.2 | 2.02e-07 | 0.28 | FALSE |
Brain | Itgb3bp | intron excision ratio | chr5_114510313_114525205 | 0.03 | 1864 | 0.02 | 3.8e-03 | 5.37 | 8.04e-08 | 0.35 | TRUE |
Brain | LOC102553524 | intron excision ratio | chr5_112231241_112237441 | 0.03 | 1 | 0.03 | 1.6e-03 | -5.22 | 1.83e-07 | 0.04 | FALSE |
Brain | LOC102553524 | intron excision ratio | chr5_112231241_112246302 | 0.08 | 1 | 0.08 | 7.2e-08 | 5.35 | 8.68e-08 | 0.58 | FALSE |
Brain | LOC102553524 | intron excision ratio | chr5_112242368_112246302 | 0.04 | 1562 | 0.04 | 1.6e-04 | 5.48 | 4.18e-08 | 0.44 | FALSE |
Brain | Patj | intron excision ratio | chr5_113208549_113235070 | 0.04 | 1 | 0.03 | 2.0e-03 | 5.26 | 1.40e-07 | 0.06 | FALSE |
Brain | Tm2d1 | intron excision ratio | chr5_113051130_113061760 | 0.04 | 1369 | 0.02 | 6.3e-03 | 5.23 | 1.66e-07 | 0.4 | FALSE |
Brain | Alg6 | mRNA stability | Alg6 | 0.08 | 1 | 0.07 | 4.5e-07 | -5.26 | 1.46e-07 | 0.26 | FALSE |
Brain | Atg4c | mRNA stability | Atg4c | 0.11 | 1602 | 0.07 | 5.2e-07 | 5.29 | 1.23e-07 | 0.38 | FALSE |
Brain | Dock7 | mRNA stability | Dock7 | 0.19 | 18 | 0.16 | 1.7e-14 | -5.36 | 8.37e-08 | 0.4 | FALSE |
Brain | Itgb3bp | mRNA stability | Itgb3bp | 0.05 | 1864 | 0.05 | 2.1e-05 | 5.48 | 4.30e-08 | 0.37 | FALSE |
Brain | Nfia | mRNA stability | Nfia | 0.08 | 1 | 0.02 | 8.8e-03 | -5.35 | 8.68e-08 | 0.04 | FALSE |
Brain | Patj | mRNA stability | Patj | 0.18 | 1369 | 0.2 | 1.0e-18 | -5.19 | 2.08e-07 | 0.42 | FALSE |
Brain | Usp1 | mRNA stability | Usp1 | 0.12 | 1585 | 0.1 | 1.4e-09 | 5.21 | 1.86e-07 | 0.38 | FALSE |
Eye | Alg6 | gene expression | Alg6 | 0.27 | 1 | 0.1 | 1.3e-02 | 5.3 | 1.18e-07 | 0.06 | FALSE |
Eye | Atg4c | gene expression | Atg4c | 0.48 | 24 | 0.15 | 3.0e-03 | -5.24 | 1.60e-07 | 0.27 | FALSE |
Eye | Efcab7 | gene expression | Efcab7 | 0.44 | 1864 | 0.09 | 1.8e-02 | -5.44 | 5.36e-08 | 0.2 | FALSE |
Eye | LOC120103114 | gene expression | LOC120103114 | 0.54 | 78 | 0.14 | 4.2e-03 | -5.23 | 1.67e-07 | 0.29 | FALSE |
Eye | Patj | gene expression | Patj | 0.42 | 47 | 0.12 | 7.2e-03 | -5.32 | 1.03e-07 | 0.22 | FALSE |
Eye | Itgb3bp | isoform ratio | XM_039110275.1 | 0.54 | 1 | 0.11 | 8.9e-03 | 5.3 | 1.18e-07 | 0.06 | FALSE |
Eye | Atg4c | intron excision ratio | chr5_113927987_113934140 | 0.41 | 23 | 0.09 | 1.7e-02 | -5.24 | 1.60e-07 | 0.2 | FALSE |
Eye | Itgb3bp | intron excision ratio | chr5_114510313_114512559 | 0.28 | 1 | 0.12 | 7.1e-03 | 5.6 | 2.17e-08 | 0.06 | FALSE |
Eye | Atg4c | mRNA stability | Atg4c | 0.34 | 1 | 0.12 | 7.6e-03 | -5.23 | 1.74e-07 | 0.06 | FALSE |
Eye | LOC120103114 | mRNA stability | LOC120103114 | 0.31 | 1422 | 0.1 | 1.3e-02 | -5.25 | 1.49e-07 | 0.2 | FALSE |
Eye | Usp1 | mRNA stability | Usp1 | 0.36 | 1 | 0.07 | 3.6e-02 | -5.25 | 1.51e-07 | 0.06 | FALSE |
IL | Atg4c | gene expression | Atg4c | 0.46 | 22 | 0.23 | 3.9e-06 | -5.2 | 2.04e-07 | 0.38 | FALSE |
IL | Dock7 | gene expression | Dock7 | 0.37 | 1 | 0.19 | 2.9e-05 | -5.27 | 1.37e-07 | 0.06 | FALSE |
IL | LOC102553524 | gene expression | LOC102553524 | 0.23 | 19 | 0.11 | 1.4e-03 | 5.32 | 1.07e-07 | 0.31 | FALSE |
IL | LOC685453 | gene expression | LOC685453 | 0.15 | 1 | 0.06 | 1.3e-02 | -5.22 | 1.76e-07 | 0.05 | FALSE |
IL | Itgb3bp | isoform ratio | XM_039110277.1 | 0.34 | 1 | 0.29 | 9.8e-08 | 5.26 | 1.45e-07 | 0.15 | FALSE |
IL | Itgb3bp | intron excision ratio | chr5_114460416_114473633 | 0.68 | 1 | 0.57 | 2.2e-16 | -5.26 | 1.45e-07 | 0.35 | FALSE |
IL | Itgb3bp | intron excision ratio | chr5_114462459_114473633 | 0.36 | 29 | 0.24 | 1.6e-06 | -5.44 | 5.37e-08 | 0.37 | TRUE |
IL | Dock7 | mRNA stability | Dock7 | 0.14 | 68 | 0.06 | 1.6e-02 | 5.55 | 2.81e-08 | 0.25 | FALSE |
LHb | Alg6 | alternative polyA | XM_039110268.1 | 0.15 | 1 | 0.06 | 1.2e-02 | 5.4 | 6.61e-08 | 0.05 | FALSE |
LHb | Alg6 | alternative polyA | XM_039110268.1 | 0.21 | 1791 | 0.06 | 1.2e-02 | -5.47 | 4.55e-08 | 0.26 | FALSE |
LHb | LOC120103114 | alternative polyA | XR_005505180.1 | 0.19 | 1422 | 0.11 | 1.3e-03 | -5.34 | 9.23e-08 | 0.33 | FALSE |
LHb | LOC120103114 | alternative polyA | XR_005505181.1 | 0.18 | 1422 | 0.11 | 1.7e-03 | 5.34 | 9.26e-08 | 0.32 | FALSE |
LHb | LOC120103114 | alternative polyA | XR_005505180.1 | 0.23 | 1422 | 0.14 | 3.9e-04 | -5.35 | 8.95e-08 | 0.37 | FALSE |
LHb | LOC120103114 | alternative polyA | XR_005505181.1 | 0.21 | 1422 | 0.13 | 6.6e-04 | 5.34 | 9.05e-08 | 0.35 | FALSE |
LHb | Atg4c | gene expression | Atg4c | 0.46 | 1 | 0.31 | 4.4e-08 | 5.26 | 1.43e-07 | 0.15 | FALSE |
LHb | LOC685453 | gene expression | LOC685453 | 0.18 | 116 | 0.13 | 4.4e-04 | -5.77 | 8.13e-09 | 0.32 | FALSE |
LHb | Ror1 | gene expression | Ror1 | 0.18 | 1 | 0.16 | 1.4e-04 | -5.26 | 1.47e-07 | 0.05 | FALSE |
LHb | Itgb3bp | isoform ratio | XM_039110277.1 | 0.59 | 1 | 0.35 | 2.7e-09 | 5.31 | 1.11e-07 | 0.25 | FALSE |
LHb | LOC120103114 | isoform ratio | XR_005505179.1 | 0.21 | 1422 | 0.1 | 2.1e-03 | -5.29 | 1.25e-07 | 0.3 | FALSE |
LHb | Atg4c | intron excision ratio | chr5_113915345_113934140 | 0.13 | 1 | 0.06 | 1.5e-02 | -5.26 | 1.43e-07 | 0.05 | FALSE |
LHb | Itgb3bp | intron excision ratio | chr5_114460416_114462412 | 0.38 | 25 | 0.31 | 3.8e-08 | -5.43 | 5.74e-08 | 0.38 | FALSE |
LHb | Itgb3bp | intron excision ratio | chr5_114460416_114473633 | 0.6 | 1864 | 0.47 | 7.5e-13 | 5.25 | 1.53e-07 | 0.38 | FALSE |
LHb | Itgb3bp | intron excision ratio | chr5_114462459_114473633 | 0.39 | 1 | 0.36 | 2.5e-09 | 5.26 | 1.43e-07 | 0.21 | FALSE |
LHb | Dock7 | mRNA stability | Dock7 | 0.15 | 1606 | 0.09 | 4.1e-03 | -5.26 | 1.44e-07 | 0.29 | FALSE |
LHb | Itgb3bp | mRNA stability | Itgb3bp | 0.22 | 1 | 0.17 | 9.4e-05 | -5.31 | 1.11e-07 | 0.06 | FALSE |
Liver | LOC102556219 | alternative polyA | XR_005504909.1 | 0.1 | 1 | 0.07 | 3.1e-08 | 5.36 | 8.37e-08 | 0.52 | FALSE |
Liver | LOC102556219 | alternative polyA | XR_354161.4 | 0.11 | 1 | 0.07 | 1.2e-08 | -5.25 | 1.54e-07 | 0.39 | FALSE |
Liver | Nfia | alternative polyA | XM_039109300.1 | 0.02 | 1427 | 0.01 | 2.7e-02 | 5.35 | 8.98e-08 | 0.22 | FALSE |
Liver | Nfia | alternative TSS | XM_039109303.1 | 0.12 | 1427 | 0.08 | 2.3e-09 | 5.35 | 8.90e-08 | 0.43 | FALSE |
Liver | Alg6 | gene expression | Alg6 | 0.22 | 6 | 0.09 | 2.6e-10 | -5.51 | 3.65e-08 | 0.48 | FALSE |
Liver | Atg4c | gene expression | Atg4c | 0.11 | 1602 | 0.06 | 1.0e-06 | -5.28 | 1.26e-07 | 0.38 | FALSE |
Liver | Dock7 | gene expression | Dock7 | 0.09 | 1606 | 0.06 | 6.5e-07 | 5.26 | 1.41e-07 | 0.39 | FALSE |
Liver | LOC102556219 | gene expression | LOC102556219 | 0.19 | 2 | 0.1 | 8.2e-11 | 5.45 | 4.96e-08 | 0.4 | TRUE |
Liver | LOC120103114 | gene expression | LOC120103114 | 0.2 | 1422 | 0.14 | 7.2e-15 | -5.32 | 1.06e-07 | 0.4 | FALSE |
Liver | LOC685453 | gene expression | LOC685453 | 0.21 | 1577 | 0.09 | 5.7e-10 | 5.34 | 9.45e-08 | 0.39 | FALSE |
Liver | Angptl3 | isoform ratio | NM_001399252.1 | 0.02 | 122 | 0.01 | 3.6e-02 | -5.35 | 8.86e-08 | 0.21 | FALSE |
Liver | Atg4c | isoform ratio | XM_039109911.1 | 0.08 | 44 | 0.04 | 2.1e-05 | -5.26 | 1.46e-07 | 0.39 | FALSE |
Liver | Atg4c | isoform ratio | XM_039109913.1 | 0.04 | 1 | 0.01 | 4.8e-02 | 5.24 | 1.62e-07 | 0.03 | FALSE |
Liver | Angptl3 | intron excision ratio | chr5_113706569_113706823 | 0.19 | 1 | 0.02 | 6.6e-03 | 5.36 | 8.37e-08 | 0.03 | FALSE |
Liver | Angptl3 | intron excision ratio | chr5_113706918_113709084 | 0.15 | 1 | 0.03 | 2.5e-04 | -5.36 | 8.37e-08 | 0.08 | FALSE |
Liver | Itgb3bp | intron excision ratio | chr5_114460416_114462412 | 0.12 | 1 | 0.07 | 3.0e-08 | 5.21 | 1.86e-07 | 0.3 | FALSE |
Liver | Itgb3bp | intron excision ratio | chr5_114460416_114473633 | 0.19 | 1 | 0.17 | 1.1e-18 | -5.21 | 1.86e-07 | 0.3 | FALSE |
Liver | Itgb3bp | intron excision ratio | chr5_114510313_114512559 | 0.39 | 1 | 0.12 | 2.5e-13 | 5.63 | 1.78e-08 | 0.8 | FALSE |
Liver | Itgb3bp | intron excision ratio | chr5_114510313_114525205 | 0.07 | 50 | 0.02 | 1.6e-03 | -5.25 | 1.53e-07 | 0.44 | TRUE |
Liver | Atg4c | mRNA stability | Atg4c | 0.25 | 1 | 0.11 | 8.5e-12 | -5.21 | 1.91e-07 | 0.34 | FALSE |
Liver | Dock7 | mRNA stability | Dock7 | 0.03 | 1606 | 0.01 | 3.3e-02 | 5.26 | 1.47e-07 | 0.26 | FALSE |
Liver | LOC120103114 | mRNA stability | LOC120103114 | 0.07 | 35 | 0.05 | 1.7e-06 | 5.52 | 3.46e-08 | 0.4 | FALSE |
NAcc | Alg6 | alternative polyA | XM_039110268.1 | 0.04 | 52 | 0.05 | 2.3e-06 | 5.18 | 2.19e-07 | 0.33 | TRUE |
NAcc | Alg6 | alternative polyA | XM_039110268.1 | 0.05 | 3 | 0.05 | 7.4e-07 | -5.26 | 1.41e-07 | 0.33 | FALSE |
NAcc | Alg6 | alternative polyA | XM_039110269.1 | 0.06 | 9 | 0.05 | 1.4e-06 | 5.26 | 1.45e-07 | 0.32 | FALSE |
NAcc | LOC102553524 | alternative polyA | XR_005505183.1 | 0.05 | 1562 | 0.06 | 3.4e-07 | 5.38 | 7.38e-08 | 0.37 | FALSE |
NAcc | LOC102553524 | alternative polyA | XR_354158.4 | 0.05 | 1562 | 0.06 | 2.1e-07 | -5.37 | 7.85e-08 | 0.37 | FALSE |
NAcc | LOC120103114 | alternative polyA | XR_005505180.1 | 0.11 | 1422 | 0.12 | 8.7e-14 | -5.32 | 1.05e-07 | 0.36 | FALSE |
NAcc | LOC120103114 | alternative polyA | XR_005505181.1 | 0.11 | 1422 | 0.12 | 1.2e-13 | 5.32 | 1.04e-07 | 0.36 | FALSE |
NAcc | LOC120103114 | alternative polyA | XR_005505180.1 | 0.12 | 1422 | 0.11 | 4.2e-13 | -5.34 | 9.16e-08 | 0.36 | FALSE |
NAcc | LOC120103114 | alternative polyA | XR_005505181.1 | 0.12 | 1422 | 0.11 | 1.3e-12 | 5.35 | 8.97e-08 | 0.36 | FALSE |
NAcc | Nfia | alternative polyA | NM_012988.2 | 0.03 | 1 | 0.01 | 8.8e-03 | 5.19 | 2.15e-07 | 0.04 | FALSE |
NAcc | Nfia | alternative polyA | XM_039109300.1 | 0.02 | 1427 | 0.01 | 1.5e-02 | 5.37 | 7.83e-08 | 0.35 | FALSE |
NAcc | Nfia | alternative polyA | XM_039109300.1 | 0.02 | 1427 | 0.01 | 1.2e-02 | 5.37 | 8.00e-08 | 0.35 | FALSE |
NAcc | Patj | alternative TSS | XM_008763916.3 | 0.03 | 145 | 0.02 | 1.4e-03 | 5.25 | 1.51e-07 | 0.42 | FALSE |
NAcc | Atg4c | gene expression | Atg4c | 0.43 | 81 | 0.52 | 2.8e-70 | 5.24 | 1.62e-07 | 0.42 | FALSE |
NAcc | C5h1orf87 | gene expression | C5h1orf87 | 0.03 | 1691 | 0.02 | 1.4e-03 | -5.18 | 2.18e-07 | 0.35 | TRUE |
NAcc | Dock7 | gene expression | Dock7 | 0.27 | 1 | 0.21 | 1.8e-24 | -5.26 | 1.46e-07 | 0.41 | FALSE |
NAcc | Itgb3bp | gene expression | Itgb3bp | 0.03 | 1 | 0.04 | 1.9e-05 | -5.3 | 1.15e-07 | 0.15 | FALSE |
NAcc | Kank4 | gene expression | Kank4 | 0.05 | 1478 | 0.04 | 1.1e-05 | 5.21 | 1.92e-07 | 0.41 | TRUE |
NAcc | LOC102553524 | gene expression | LOC102553524 | 0.06 | 1562 | 0.06 | 5.9e-08 | 5.33 | 9.72e-08 | 0.39 | FALSE |
NAcc | LOC120103114 | gene expression | LOC120103114 | 0.45 | 60 | 0.5 | 2.3e-66 | -5.23 | 1.72e-07 | 0.37 | FALSE |
NAcc | LOC685453 | gene expression | LOC685453 | 0.12 | 1 | 0.1 | 3.1e-11 | -5.21 | 1.93e-07 | 0.34 | FALSE |
NAcc | Patj | gene expression | Patj | 0.27 | 1 | 0.2 | 5.8e-23 | 5.2 | 2.01e-07 | 0.46 | FALSE |
NAcc | Dock7 | isoform ratio | NM_001415886.1 | 0.03 | 1606 | 0.02 | 9.2e-04 | 5.24 | 1.57e-07 | 0.36 | FALSE |
NAcc | Itgb3bp | isoform ratio | XM_039110283.1 | 0.03 | 1 | 0.02 | 1.8e-03 | -5.51 | 3.63e-08 | 0.1 | FALSE |
NAcc | LOC102553524 | isoform ratio | XR_354158.4 | 0.07 | 27 | 0.09 | 9.8e-11 | -5.65 | 1.63e-08 | 0.37 | FALSE |
NAcc | Patj | isoform ratio | XM_008763916.3 | 0.05 | 261 | 0.05 | 3.6e-06 | 5.35 | 8.97e-08 | 0.43 | FALSE |
NAcc | Dock7 | intron excision ratio | chr5_113610926_113619139 | 0.02 | 1606 | 0.02 | 2.3e-03 | 5.25 | 1.51e-07 | 0.35 | FALSE |
NAcc | Dock7 | intron excision ratio | chr5_113617633_113619139 | 0.03 | 1606 | 0.02 | 7.8e-04 | -5.25 | 1.50e-07 | 0.36 | FALSE |
NAcc | Dock7 | intron excision ratio | chr5_113689726_113692835 | 0.03 | 1606 | 0.01 | 7.5e-03 | -5.29 | 1.24e-07 | 0.34 | FALSE |
NAcc | Itgb3bp | intron excision ratio | chr5_114460416_114473633 | 0.63 | 90 | 0.59 | 2.7e-84 | -5.41 | 6.28e-08 | 0.31 | FALSE |
NAcc | Itgb3bp | intron excision ratio | chr5_114462459_114473633 | 0.07 | 1864 | 0.1 | 5.6e-12 | -5.44 | 5.25e-08 | 0.38 | FALSE |
NAcc | Itgb3bp | intron excision ratio | chr5_114484705_114510271 | 0.02 | 1 | 0.03 | 1.5e-04 | -5.27 | 1.38e-07 | 0.12 | FALSE |
NAcc | Itgb3bp | intron excision ratio | chr5_114510313_114525205 | 0.03 | 1 | 0.02 | 1.1e-03 | -5.22 | 1.82e-07 | 0.06 | FALSE |
NAcc | LOC102553524 | intron excision ratio | chr5_112231241_112246302 | 0.1 | 1562 | 0.15 | 7.1e-17 | -5.39 | 6.97e-08 | 0.37 | FALSE |
NAcc | LOC102553524 | intron excision ratio | chr5_112242368_112246302 | 0.03 | 1 | 0.03 | 2.3e-04 | -5.24 | 1.60e-07 | 0.07 | FALSE |
NAcc | Patj | intron excision ratio | chr5_113199348_113235070 | 0.03 | 1 | 0.03 | 5.3e-04 | -5.18 | 2.23e-07 | 0.05 | FALSE |
NAcc | Patj | intron excision ratio | chr5_113208549_113235070 | 0.02 | 1 | 0.02 | 3.1e-03 | 5.18 | 2.23e-07 | 0.03 | FALSE |
NAcc | Dock7 | mRNA stability | Dock7 | 0.06 | 33 | 0.06 | 2.0e-07 | 5.56 | 2.65e-08 | 0.39 | FALSE |
NAcc | Itgb3bp | mRNA stability | Itgb3bp | 0.03 | 1864 | 0.03 | 3.2e-04 | 5.47 | 4.41e-08 | 0.34 | FALSE |
NAcc | LOC120103114 | mRNA stability | LOC120103114 | 0.08 | 1422 | 0.09 | 3.7e-10 | -5.2 | 1.98e-07 | 0.38 | FALSE |
NAcc | Patj | mRNA stability | Patj | 0.12 | 1 | 0.08 | 1.7e-09 | 5.2 | 2.01e-07 | 0.46 | FALSE |
NAcc | Usp1 | mRNA stability | Usp1 | 0.06 | 1585 | 0.04 | 7.7e-06 | 5.24 | 1.59e-07 | 0.41 | FALSE |
OFC | Atg4c | gene expression | Atg4c | 0.65 | 1 | 0.35 | 3.5e-09 | 5.26 | 1.43e-07 | 0.23 | FALSE |
OFC | Dock7 | gene expression | Dock7 | 0.31 | 90 | 0.13 | 7.0e-04 | -5.55 | 2.91e-08 | 0.35 | FALSE |
OFC | LOC102553524 | gene expression | LOC102553524 | 0.2 | 1562 | 0.08 | 5.3e-03 | 5.36 | 8.39e-08 | 0.25 | FALSE |
OFC | LOC685453 | gene expression | LOC685453 | 0.29 | 1577 | 0.13 | 6.0e-04 | 5.3 | 1.16e-07 | 0.34 | FALSE |
OFC | Patj | gene expression | Patj | 0.22 | 334 | 0.07 | 7.7e-03 | -5.27 | 1.37e-07 | 0.32 | FALSE |
OFC | Itgb3bp | intron excision ratio | chr5_114460416_114473633 | 0.42 | 1 | 0.36 | 1.7e-09 | -5.26 | 1.43e-07 | 0.26 | FALSE |
PL | Alg6 | alternative polyA | XM_039110268.1 | 0.09 | 7 | 0.1 | 4.2e-11 | -5.29 | 1.21e-07 | 0.33 | FALSE |
PL | Alg6 | alternative polyA | XM_039110269.1 | 0.08 | 7 | 0.1 | 4.4e-11 | 5.29 | 1.21e-07 | 0.33 | FALSE |
PL | Alg6 | alternative polyA | XM_039110268.1 | 0.05 | 1 | 0.07 | 9.3e-08 | 5.37 | 8.02e-08 | 0.46 | FALSE |
PL | LOC102553524 | alternative polyA | XR_005505183.1 | 0.05 | 1562 | 0.05 | 2.9e-06 | 5.43 | 5.75e-08 | 0.41 | FALSE |
PL | LOC102553524 | alternative polyA | XR_354158.4 | 0.05 | 1562 | 0.05 | 2.3e-06 | -5.41 | 6.17e-08 | 0.4 | FALSE |
PL | Nfia | alternative TSS | XM_039109303.1 | 0.02 | 1427 | 0.02 | 4.7e-03 | 5.36 | 8.37e-08 | 0.3 | FALSE |
PL | Tm2d1 | alternative TSS | NM_001108670.2 | 0.03 | 1 | 0.03 | 3.6e-04 | 5.18 | 2.23e-07 | 0.06 | FALSE |
PL | Atg4c | gene expression | Atg4c | 0.41 | 1602 | 0.52 | 4.6e-67 | -5.26 | 1.42e-07 | 0.41 | FALSE |
PL | Dock7 | gene expression | Dock7 | 0.49 | 1606 | 0.4 | 1.2e-47 | 5.24 | 1.61e-07 | 0.36 | FALSE |
PL | Efcab7 | gene expression | Efcab7 | 0.02 | 1864 | 0.02 | 6.3e-03 | -5.41 | 6.22e-08 | 0.4 | FALSE |
PL | Itgb3bp | gene expression | Itgb3bp | 0.06 | 1 | 0.04 | 9.0e-06 | -5.26 | 1.42e-07 | 0.19 | FALSE |
PL | LOC102553524 | gene expression | LOC102553524 | 0.12 | 1562 | 0.12 | 9.5e-13 | 5.23 | 1.71e-07 | 0.36 | FALSE |
PL | Patj | gene expression | Patj | 0.05 | 1369 | 0.05 | 3.8e-06 | 5.24 | 1.61e-07 | 0.42 | FALSE |
PL | Itgb3bp | isoform ratio | NM_001013213.1 | 0.04 | 1864 | 0.05 | 6.3e-06 | -5.44 | 5.43e-08 | 0.36 | FALSE |
PL | LOC102553524 | isoform ratio | XR_354158.4 | 0.05 | 1562 | 0.06 | 8.6e-07 | -5.45 | 5.10e-08 | 0.4 | FALSE |
PL | LOC120103114 | isoform ratio | XR_005505179.1 | 0.14 | 1422 | 0.18 | 4.7e-19 | -5.33 | 9.60e-08 | 0.4 | FALSE |
PL | Tm2d1 | isoform ratio | NM_001108670.2 | 0.04 | 1 | 0.04 | 2.9e-05 | 5.18 | 2.23e-07 | 0.15 | FALSE |
PL | Atg4c | intron excision ratio | chr5_113915345_113934140 | 0.1 | 1 | 0.09 | 2.3e-10 | 5.25 | 1.52e-07 | 0.39 | FALSE |
PL | Dock7 | intron excision ratio | chr5_113751397_113757479 | 0.03 | 1 | 0.03 | 6.5e-04 | 5.18 | 2.23e-07 | 0.04 | FALSE |
PL | Dock7 | intron excision ratio | chr5_113757584_113782662 | 0.03 | 1606 | 0.02 | 2.0e-03 | 5.25 | 1.52e-07 | 0.35 | FALSE |
PL | Itgb3bp | intron excision ratio | chr5_114460416_114462412 | 0.21 | 1 | 0.27 | 3.3e-30 | 5.23 | 1.73e-07 | 0.31 | FALSE |
PL | Itgb3bp | intron excision ratio | chr5_114460416_114473633 | 0.6 | 32 | 0.63 | 2.2e-89 | 5.22 | 1.79e-07 | 0.32 | FALSE |
PL | Itgb3bp | intron excision ratio | chr5_114462459_114473633 | 0.2 | 49 | 0.25 | 2.1e-27 | -5.28 | 1.33e-07 | 0.37 | FALSE |
PL | Itgb3bp | intron excision ratio | chr5_114484705_114510271 | 0.02 | 1864 | 0.02 | 3.6e-03 | 5.46 | 4.68e-08 | 0.37 | FALSE |
PL | Itgb3bp | intron excision ratio | chr5_114510313_114525205 | 0.03 | 1864 | 0.04 | 8.9e-05 | 5.4 | 6.57e-08 | 0.43 | FALSE |
PL | LOC102553524 | intron excision ratio | chr5_112231241_112246302 | 0.11 | 1562 | 0.14 | 4.7e-15 | -5.44 | 5.32e-08 | 0.38 | FALSE |
PL | Alg6 | mRNA stability | Alg6 | 0.05 | 1 | 0.05 | 5.3e-06 | -5.26 | 1.47e-07 | 0.25 | FALSE |
PL | Dock7 | mRNA stability | Dock7 | 0.16 | 1606 | 0.11 | 4.1e-12 | -5.21 | 1.88e-07 | 0.36 | FALSE |
PL | Itgb3bp | mRNA stability | Itgb3bp | 0.03 | 1 | 0.02 | 6.1e-03 | -5.27 | 1.38e-07 | 0.03 | FALSE |
PL | Nfia | mRNA stability | Nfia | 0.03 | 1 | 0.02 | 1.1e-03 | -5.3 | 1.17e-07 | 0.05 | FALSE |
PL | Usp1 | mRNA stability | Usp1 | 0.03 | 1585 | 0.02 | 1.1e-03 | 5.21 | 1.87e-07 | 0.36 | FALSE |
pVTA | LOC120103114 | alternative polyA | XR_005505181.1 | 0.3 | 39 | 0.29 | 7.3e-13 | 5.24 | 1.60e-07 | 0.37 | FALSE |
pVTA | Nfia | alternative polyA | NM_012988.2 | 0.12 | 1427 | 0.04 | 8.5e-03 | -5.32 | 1.01e-07 | 0.34 | FALSE |
pVTA | Nfia | alternative polyA | XM_039109300.1 | 0.09 | 1427 | 0.03 | 2.2e-02 | 5.31 | 1.12e-07 | 0.3 | FALSE |
pVTA | Atg4c | gene expression | Atg4c | 0.56 | 66 | 0.36 | 1.2e-16 | -5.3 | 1.13e-07 | 0.39 | FALSE |
pVTA | Dock7 | gene expression | Dock7 | 0.36 | 50 | 0.32 | 2.7e-14 | -5.26 | 1.44e-07 | 0.39 | FALSE |
pVTA | Kank4 | gene expression | Kank4 | 0.09 | 1 | 0.07 | 6.5e-04 | -5.2 | 2.01e-07 | 0.05 | FALSE |
pVTA | LOC685453 | gene expression | LOC685453 | 0.22 | 151 | 0.19 | 1.9e-08 | -5.24 | 1.58e-07 | 0.39 | FALSE |
pVTA | Atg4c | isoform ratio | XM_039109911.1 | 0.09 | 1 | 0.05 | 3.6e-03 | -5.25 | 1.53e-07 | 0.05 | FALSE |
pVTA | Itgb3bp | isoform ratio | XM_039110277.1 | 0.13 | 1864 | 0.11 | 1.5e-05 | -5.43 | 5.54e-08 | 0.36 | FALSE |
pVTA | LOC102553524 | isoform ratio | XR_354158.4 | 0.06 | 1 | 0.06 | 1.7e-03 | 5.3 | 1.17e-07 | 0.05 | FALSE |
pVTA | LOC120103114 | isoform ratio | XR_005505179.1 | 0.24 | 31 | 0.21 | 1.4e-09 | 5.55 | 2.93e-08 | 0.4 | FALSE |
pVTA | LOC120103114 | isoform ratio | XR_005505182.1 | 0.07 | 1422 | 0.03 | 1.8e-02 | 5.31 | 1.12e-07 | 0.31 | FALSE |
pVTA | Itgb3bp | intron excision ratio | chr5_114460416_114462412 | 0.3 | 1864 | 0.35 | 4.2e-16 | -5.31 | 1.07e-07 | 0.42 | FALSE |
pVTA | Itgb3bp | intron excision ratio | chr5_114462459_114473633 | 0.32 | 168 | 0.42 | 5.9e-20 | 5.2 | 2.02e-07 | 0.38 | FALSE |
pVTA | Itgb3bp | intron excision ratio | chr5_114510313_114525205 | 0.06 | 1864 | 0.05 | 3.7e-03 | 5.44 | 5.21e-08 | 0.32 | FALSE |
pVTA | LOC102553524 | intron excision ratio | chr5_112231241_112237441 | 0.1 | 24 | 0.1 | 5.3e-05 | 5.28 | 1.26e-07 | 0.39 | FALSE |
pVTA | LOC102553524 | intron excision ratio | chr5_112231241_112246302 | 0.16 | 1 | 0.11 | 1.8e-05 | 5.29 | 1.21e-07 | 0.2 | FALSE |
pVTA | Ube2u | intron excision ratio | chr5_115121206_115122334 | 0.05 | 1 | 0.05 | 3.5e-03 | 5.21 | 1.92e-07 | 0.05 | TRUE |
pVTA | Itgb3bp | mRNA stability | Itgb3bp | 0.11 | 65 | 0.14 | 8.5e-07 | -5.21 | 1.92e-07 | 0.37 | FALSE |
pVTA | Usp1 | mRNA stability | Usp1 | 0.07 | 25 | 0.04 | 1.0e-02 | 5.18 | 2.19e-07 | 0.34 | FALSE |
RMTg | LOC120103114 | alternative polyA | XR_005505180.1 | 0.17 | 1 | 0.05 | 1.6e-02 | 5.31 | 1.11e-07 | 0.05 | FALSE |
RMTg | LOC120103114 | alternative polyA | XR_005505180.1 | 0.2 | 1 | 0.06 | 8.8e-03 | 5.31 | 1.11e-07 | 0.05 | FALSE |
RMTg | Itgb3bp | gene expression | Itgb3bp | 0.15 | 1864 | 0.1 | 1.4e-03 | 5.42 | 5.86e-08 | 0.4 | FALSE |
RMTg | LOC120103114 | gene expression | LOC120103114 | 0.91 | 1 | 0.16 | 3.8e-05 | 5.32 | 1.02e-07 | 0.1 | FALSE |
RMTg | Ror1 | gene expression | Ror1 | 0.11 | 2080 | 0.07 | 5.7e-03 | 5.44 | 5.19e-08 | 0.35 | FALSE |
RMTg | Itgb3bp | isoform ratio | XM_039110277.1 | 0.24 | 1 | 0.2 | 6.0e-06 | 5.19 | 2.10e-07 | 0.08 | FALSE |
RMTg | LOC120103114 | isoform ratio | XR_005505179.1 | 0.12 | 1 | 0.1 | 1.6e-03 | 5.58 | 2.46e-08 | 0.06 | FALSE |
RMTg | Itgb3bp | intron excision ratio | chr5_114460416_114462412 | 0.13 | 5 | 0.09 | 2.4e-03 | -5.41 | 6.17e-08 | 0.29 | FALSE |
RMTg | Itgb3bp | intron excision ratio | chr5_114460416_114473633 | 0.16 | 1864 | 0.1 | 1.1e-03 | 5.44 | 5.30e-08 | 0.32 | FALSE |
RMTg | Itgb3bp | intron excision ratio | chr5_114462459_114473633 | 0.11 | 1 | 0.08 | 3.7e-03 | 5.19 | 2.10e-07 | 0.05 | FALSE |