Best TWAS P = 1.61e-08 · Best GWAS P= 6.64e-09 conditioned to 1e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Brain | Cacul1 | isoform ratio | NM_001416001.1 | 0.1 | 1 | 0.08 | 3.5e-08 | -5.31 | 1.10e-07 | 0.52 | FALSE |
| Brain | Cacul1 | intron excision ratio | chr1_269663603_269672274 | 0.11 | 1 | 0.08 | 4.3e-08 | 5.31 | 1.10e-07 | 0.52 | FALSE |
| IC | Grk5 | gene expression | Grk5 | 0.12 | 1 | 0.07 | 7.4e-04 | 5.25 | 1.48e-07 | 0.07 | FALSE |
| IC | Cacul1 | isoform ratio | NM_001014248.2 | 0.1 | 5 | 0.04 | 8.5e-03 | 5.44 | 5.26e-08 | 0.52 | FALSE |
| NAcc | Prlhr | gene expression | Prlhr | 0.16 | 116 | 0.15 | 5.0e-22 | 5.24 | 1.60e-07 | 0.92 | TRUE |
| NAcc | Sfxn4 | gene expression | Sfxn4 | 0.05 | 14 | 0.06 | 1.5e-09 | 5.4 | 6.64e-08 | 0.21 | TRUE |
| NAcc | Cacul1 | isoform ratio | NM_001014248.2 | 0.16 | 1 | 0.05 | 9.7e-08 | 5.34 | 9.15e-08 | 0.57 | FALSE |
| OFC | Rab11fip2 | gene expression | Rab11fip2 | 0.27 | 164 | 0.21 | 8.5e-06 | -5.25 | 1.54e-07 | 0.4 | FALSE |
| PL | Cacul1 | isoform ratio | NM_001014248.2 | 0.02 | 1822 | 0.01 | 1.3e-02 | 5.65 | 1.61e-08 | 0.73 | TRUE |