chr1:257,808,644-260,518,987

Trait: Parametrial fat weight

Best TWAS P=1.38e-18 · Best GWAS P=2.76e-19 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Dennd10 gene expression ENSRNOG00000010230 0.03 1 0.03 2.5e-04 -7.11 1.17e-12 0.02 FALSE
Adipose Prdx3 gene expression ENSRNOG00000010958 0.19 34 0.22 1.6e-23 -5.39 7.01e-08 0 FALSE
Adipose Grk5 gene expression ENSRNOG00000011439 0.17 24 0.22 8.6e-24 7.03 2.10e-12 0 FALSE
Adipose Ces2c gene expression ENSRNOG00000036571 0.11 596 0.07 2.3e-08 5.23 1.66e-07 0.17 FALSE
Adipose Pdzd8 mRNA stability ENSRNOG00000009460 0.04 1998 0.01 7.6e-02 5.96 2.53e-09 0.05 FALSE
Adipose Fam204a mRNA stability ENSRNOG00000009830 0.03 64 0.01 5.4e-02 5.35 8.69e-08 0.06 TRUE
Adipose Cacul1 mRNA stability ENSRNOG00000009954 0.09 62 0.04 5.6e-05 5.37 7.67e-08 0.03 FALSE
BLA Rab11fip2 gene expression ENSRNOG00000009523 0.11 1 0.05 1.1e-03 -5.37 7.90e-08 0.04 FALSE
BLA Ces2c gene expression ENSRNOG00000036571 0.26 16 0.2 1.1e-10 7.09 1.33e-12 0.67 FALSE
BLA Sfxn4 gene expression ENSRNOG00000036572 0.07 1 0.02 2.1e-02 8.33 8.19e-17 0.04 FALSE
BLA Cacul1 isoform ratio ENSRNOT00000084760 0.07 1 0 2.4e-01 -7.22 5.35e-13 0.04 FALSE
Brain Rab11fip2 gene expression ENSRNOG00000009523 0.09 2 0.06 3.6e-06 -5.32 1.01e-07 0.04 FALSE
Brain Prlhr gene expression ENSRNOG00000009922 0.03 1906 0.01 1.4e-02 6.59 4.53e-11 0.23 FALSE
Brain Cacul1 gene expression ENSRNOG00000009954 0.16 1783 0.15 4.8e-14 5.41 6.21e-08 0 FALSE
Brain Nanos1 gene expression ENSRNOG00000025060 0.03 58 0.01 2.2e-02 -7.84 4.60e-15 0.3 FALSE
Brain Ces2c gene expression ENSRNOG00000036571 0.2 597 0.29 3.4e-27 6.98 2.85e-12 0.68 FALSE
Brain Sfxn4 gene expression ENSRNOG00000036572 0.09 36 0.09 2.2e-08 5.96 2.53e-09 0 TRUE
Brain Cacul1 isoform ratio ENSRNOT00000050617 0.14 1 0.11 3.3e-10 8.8 1.38e-18 0.89 TRUE
Brain Cacul1 isoform ratio ENSRNOT00000084760 0.12 5 0.11 5.6e-10 -7.83 5.01e-15 0.89 TRUE
Brain Zfp950 isoform ratio ENSRNOT00000047883 0.04 954 0.05 9.3e-06 6.36 2.05e-10 0.02 FALSE
Brain Cacul1 intron excision ratio chr1:259677583:259686255 0.12 36 0.1 1.6e-09 8.05 8.45e-16 0.86 TRUE
Eye ENSRNOG00000065260 gene expression ENSRNOG00000065260 0.45 1 0.18 9.5e-04 -7.99 1.33e-15 0.06 FALSE
IL Ces2c gene expression ENSRNOG00000036571 0.35 1 0.35 2.3e-09 7.1 1.22e-12 0.52 FALSE
IL Sfxn4 gene expression ENSRNOG00000036572 0.19 1 0.13 5.3e-04 7.07 1.61e-12 0.05 FALSE
LHb Ces2c gene expression ENSRNOG00000036571 0.25 594 0.19 2.3e-05 6.6 4.12e-11 0.6 FALSE
Liver Rab11fip2 gene expression ENSRNOG00000009523 0.03 2371 0.01 1.3e-02 -6.22 4.90e-10 0.25 FALSE
Liver Nanos1 gene expression ENSRNOG00000025060 0.03 1 0.02 1.2e-03 -5.22 1.74e-07 0.03 TRUE
Liver Zfp950 gene expression ENSRNOG00000032668 0.03 1 0.01 7.7e-03 -7.95 1.90e-15 0.04 FALSE
Liver Cacul1 isoform ratio ENSRNOT00000050617 0.03 1 0.02 1.3e-03 8.23 1.93e-16 0.03 FALSE
Liver Cacul1 isoform ratio ENSRNOT00000084760 0.03 1780 0.02 4.5e-03 -7.83 5.02e-15 0.44 FALSE
Liver Cacul1 mRNA stability ENSRNOG00000009954 0.03 1 0.01 1.4e-02 8.49 2.00e-17 0.03 FALSE
NAcc Prlhr gene expression ENSRNOG00000009922 0.14 1904 0.11 2.3e-08 8.15 3.61e-16 0.82 FALSE
NAcc Zfp950 gene expression ENSRNOG00000032668 0.05 15 0.02 7.3e-03 6.54 5.99e-11 0.37 FALSE
NAcc Ces2c gene expression ENSRNOG00000036571 0.22 597 0.22 5.3e-16 6.5 7.85e-11 0.64 FALSE
NAcc Sfxn4 gene expression ENSRNOG00000036572 0.07 1 0.04 3.8e-04 7.78 7.16e-15 0.03 FALSE
NAcc Cacul1 isoform ratio ENSRNOT00000050617 0.05 1781 0.05 9.6e-05 8.53 1.42e-17 0.61 FALSE
NAcc Cacul1 isoform ratio ENSRNOT00000084760 0.05 1781 0.05 1.6e-04 -8.54 1.34e-17 0.61 FALSE
OFC Rab11fip2 gene expression ENSRNOG00000009523 0.3 17 0.27 5.1e-07 -8.46 2.71e-17 0.56 FALSE
OFC Cacul1 gene expression ENSRNOG00000009954 0.45 1782 0.41 9.5e-11 6.89 5.61e-12 0.59 FALSE
OFC Ces2c gene expression ENSRNOG00000036571 0.38 1 0.42 3.6e-11 7.11 1.19e-12 0.67 FALSE
OFC Sfxn4 gene expression ENSRNOG00000036572 0.41 17 0.26 7.0e-07 7.69 1.43e-14 0.02 FALSE
OFC Rab11fip2 mRNA stability ENSRNOG00000009523 0.16 1 0.19 2.9e-05 -8.46 2.76e-17 0.05 FALSE
PL Rab11fip2 gene expression ENSRNOG00000009523 0.06 76 0.05 1.5e-04 -8.35 7.09e-17 0.64 FALSE
PL Cacul1 gene expression ENSRNOG00000009954 0.24 45 0.18 2.4e-13 5.72 1.08e-08 0 FALSE
PL Ces2c gene expression ENSRNOG00000036571 0.39 1 0.38 3.4e-30 7.13 9.88e-13 0.73 FALSE
PL Sfxn4 gene expression ENSRNOG00000036572 0.17 158 0.1 9.5e-08 6.99 2.68e-12 0.06 FALSE
PL ENSRNOG00000065957 gene expression ENSRNOG00000065957 0.12 1 0.07 9.6e-06 -5.32 1.03e-07 0.02 FALSE
PL ENSRNOG00000068145 gene expression ENSRNOG00000068145 0.06 13 0.04 6.9e-04 -6.55 5.87e-11 0.41 FALSE
PL Cacul1 isoform ratio ENSRNOT00000050617 0.03 1 0.02 1.8e-02 8.29 1.14e-16 0.03 FALSE
PL Zfp950 intron excision ratio chr1:260237329:260247276 0.03 954 0.02 1.2e-02 7.44 1.00e-13 0.53 FALSE