Best TWAS P=1.38e-18 · Best GWAS P=2.76e-19 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Dennd10 | gene expression | ENSRNOG00000010230 | 0.03 | 1 | 0.03 | 2.5e-04 | -7.11 | 1.17e-12 | 0.02 | FALSE |
Adipose | Prdx3 | gene expression | ENSRNOG00000010958 | 0.19 | 34 | 0.22 | 1.6e-23 | -5.39 | 7.01e-08 | 0 | FALSE |
Adipose | Grk5 | gene expression | ENSRNOG00000011439 | 0.17 | 24 | 0.22 | 8.6e-24 | 7.03 | 2.10e-12 | 0 | FALSE |
Adipose | Ces2c | gene expression | ENSRNOG00000036571 | 0.11 | 596 | 0.07 | 2.3e-08 | 5.23 | 1.66e-07 | 0.17 | FALSE |
Adipose | Pdzd8 | mRNA stability | ENSRNOG00000009460 | 0.04 | 1998 | 0.01 | 7.6e-02 | 5.96 | 2.53e-09 | 0.05 | FALSE |
Adipose | Fam204a | mRNA stability | ENSRNOG00000009830 | 0.03 | 64 | 0.01 | 5.4e-02 | 5.35 | 8.69e-08 | 0.06 | TRUE |
Adipose | Cacul1 | mRNA stability | ENSRNOG00000009954 | 0.09 | 62 | 0.04 | 5.6e-05 | 5.37 | 7.67e-08 | 0.03 | FALSE |
BLA | Rab11fip2 | gene expression | ENSRNOG00000009523 | 0.11 | 1 | 0.05 | 1.1e-03 | -5.37 | 7.90e-08 | 0.04 | FALSE |
BLA | Ces2c | gene expression | ENSRNOG00000036571 | 0.26 | 16 | 0.2 | 1.1e-10 | 7.09 | 1.33e-12 | 0.67 | FALSE |
BLA | Sfxn4 | gene expression | ENSRNOG00000036572 | 0.07 | 1 | 0.02 | 2.1e-02 | 8.33 | 8.19e-17 | 0.04 | FALSE |
BLA | Cacul1 | isoform ratio | ENSRNOT00000084760 | 0.07 | 1 | 0 | 2.4e-01 | -7.22 | 5.35e-13 | 0.04 | FALSE |
Brain | Rab11fip2 | gene expression | ENSRNOG00000009523 | 0.09 | 2 | 0.06 | 3.6e-06 | -5.32 | 1.01e-07 | 0.04 | FALSE |
Brain | Prlhr | gene expression | ENSRNOG00000009922 | 0.03 | 1906 | 0.01 | 1.4e-02 | 6.59 | 4.53e-11 | 0.23 | FALSE |
Brain | Cacul1 | gene expression | ENSRNOG00000009954 | 0.16 | 1783 | 0.15 | 4.8e-14 | 5.41 | 6.21e-08 | 0 | FALSE |
Brain | Nanos1 | gene expression | ENSRNOG00000025060 | 0.03 | 58 | 0.01 | 2.2e-02 | -7.84 | 4.60e-15 | 0.3 | FALSE |
Brain | Ces2c | gene expression | ENSRNOG00000036571 | 0.2 | 597 | 0.29 | 3.4e-27 | 6.98 | 2.85e-12 | 0.68 | FALSE |
Brain | Sfxn4 | gene expression | ENSRNOG00000036572 | 0.09 | 36 | 0.09 | 2.2e-08 | 5.96 | 2.53e-09 | 0 | TRUE |
Brain | Cacul1 | isoform ratio | ENSRNOT00000050617 | 0.14 | 1 | 0.11 | 3.3e-10 | 8.8 | 1.38e-18 | 0.89 | TRUE |
Brain | Cacul1 | isoform ratio | ENSRNOT00000084760 | 0.12 | 5 | 0.11 | 5.6e-10 | -7.83 | 5.01e-15 | 0.89 | TRUE |
Brain | Zfp950 | isoform ratio | ENSRNOT00000047883 | 0.04 | 954 | 0.05 | 9.3e-06 | 6.36 | 2.05e-10 | 0.02 | FALSE |
Brain | Cacul1 | intron excision ratio | chr1:259677583:259686255 | 0.12 | 36 | 0.1 | 1.6e-09 | 8.05 | 8.45e-16 | 0.86 | TRUE |
Eye | ENSRNOG00000065260 | gene expression | ENSRNOG00000065260 | 0.45 | 1 | 0.18 | 9.5e-04 | -7.99 | 1.33e-15 | 0.06 | FALSE |
IL | Ces2c | gene expression | ENSRNOG00000036571 | 0.35 | 1 | 0.35 | 2.3e-09 | 7.1 | 1.22e-12 | 0.52 | FALSE |
IL | Sfxn4 | gene expression | ENSRNOG00000036572 | 0.19 | 1 | 0.13 | 5.3e-04 | 7.07 | 1.61e-12 | 0.05 | FALSE |
LHb | Ces2c | gene expression | ENSRNOG00000036571 | 0.25 | 594 | 0.19 | 2.3e-05 | 6.6 | 4.12e-11 | 0.6 | FALSE |
Liver | Rab11fip2 | gene expression | ENSRNOG00000009523 | 0.03 | 2371 | 0.01 | 1.3e-02 | -6.22 | 4.90e-10 | 0.25 | FALSE |
Liver | Nanos1 | gene expression | ENSRNOG00000025060 | 0.03 | 1 | 0.02 | 1.2e-03 | -5.22 | 1.74e-07 | 0.03 | TRUE |
Liver | Zfp950 | gene expression | ENSRNOG00000032668 | 0.03 | 1 | 0.01 | 7.7e-03 | -7.95 | 1.90e-15 | 0.04 | FALSE |
Liver | Cacul1 | isoform ratio | ENSRNOT00000050617 | 0.03 | 1 | 0.02 | 1.3e-03 | 8.23 | 1.93e-16 | 0.03 | FALSE |
Liver | Cacul1 | isoform ratio | ENSRNOT00000084760 | 0.03 | 1780 | 0.02 | 4.5e-03 | -7.83 | 5.02e-15 | 0.44 | FALSE |
Liver | Cacul1 | mRNA stability | ENSRNOG00000009954 | 0.03 | 1 | 0.01 | 1.4e-02 | 8.49 | 2.00e-17 | 0.03 | FALSE |
NAcc | Prlhr | gene expression | ENSRNOG00000009922 | 0.14 | 1904 | 0.11 | 2.3e-08 | 8.15 | 3.61e-16 | 0.82 | FALSE |
NAcc | Zfp950 | gene expression | ENSRNOG00000032668 | 0.05 | 15 | 0.02 | 7.3e-03 | 6.54 | 5.99e-11 | 0.37 | FALSE |
NAcc | Ces2c | gene expression | ENSRNOG00000036571 | 0.22 | 597 | 0.22 | 5.3e-16 | 6.5 | 7.85e-11 | 0.64 | FALSE |
NAcc | Sfxn4 | gene expression | ENSRNOG00000036572 | 0.07 | 1 | 0.04 | 3.8e-04 | 7.78 | 7.16e-15 | 0.03 | FALSE |
NAcc | Cacul1 | isoform ratio | ENSRNOT00000050617 | 0.05 | 1781 | 0.05 | 9.6e-05 | 8.53 | 1.42e-17 | 0.61 | FALSE |
NAcc | Cacul1 | isoform ratio | ENSRNOT00000084760 | 0.05 | 1781 | 0.05 | 1.6e-04 | -8.54 | 1.34e-17 | 0.61 | FALSE |
OFC | Rab11fip2 | gene expression | ENSRNOG00000009523 | 0.3 | 17 | 0.27 | 5.1e-07 | -8.46 | 2.71e-17 | 0.56 | FALSE |
OFC | Cacul1 | gene expression | ENSRNOG00000009954 | 0.45 | 1782 | 0.41 | 9.5e-11 | 6.89 | 5.61e-12 | 0.59 | FALSE |
OFC | Ces2c | gene expression | ENSRNOG00000036571 | 0.38 | 1 | 0.42 | 3.6e-11 | 7.11 | 1.19e-12 | 0.67 | FALSE |
OFC | Sfxn4 | gene expression | ENSRNOG00000036572 | 0.41 | 17 | 0.26 | 7.0e-07 | 7.69 | 1.43e-14 | 0.02 | FALSE |
OFC | Rab11fip2 | mRNA stability | ENSRNOG00000009523 | 0.16 | 1 | 0.19 | 2.9e-05 | -8.46 | 2.76e-17 | 0.05 | FALSE |
PL | Rab11fip2 | gene expression | ENSRNOG00000009523 | 0.06 | 76 | 0.05 | 1.5e-04 | -8.35 | 7.09e-17 | 0.64 | FALSE |
PL | Cacul1 | gene expression | ENSRNOG00000009954 | 0.24 | 45 | 0.18 | 2.4e-13 | 5.72 | 1.08e-08 | 0 | FALSE |
PL | Ces2c | gene expression | ENSRNOG00000036571 | 0.39 | 1 | 0.38 | 3.4e-30 | 7.13 | 9.88e-13 | 0.73 | FALSE |
PL | Sfxn4 | gene expression | ENSRNOG00000036572 | 0.17 | 158 | 0.1 | 9.5e-08 | 6.99 | 2.68e-12 | 0.06 | FALSE |
PL | ENSRNOG00000065957 | gene expression | ENSRNOG00000065957 | 0.12 | 1 | 0.07 | 9.6e-06 | -5.32 | 1.03e-07 | 0.02 | FALSE |
PL | ENSRNOG00000068145 | gene expression | ENSRNOG00000068145 | 0.06 | 13 | 0.04 | 6.9e-04 | -6.55 | 5.87e-11 | 0.41 | FALSE |
PL | Cacul1 | isoform ratio | ENSRNOT00000050617 | 0.03 | 1 | 0.02 | 1.8e-02 | 8.29 | 1.14e-16 | 0.03 | FALSE |
PL | Zfp950 | intron excision ratio | chr1:260237329:260247276 | 0.03 | 954 | 0.02 | 1.2e-02 | 7.44 | 1.00e-13 | 0.53 | FALSE |