Best TWAS P = 7.15e-28 · Best GWAS P= 9.15e-28 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Ablim1 | alternative polyA | XM_039110220.2 | 0.11 | 1 | 0.03 | 2.1e-04 | -5.93 | 3.01e-09 | 0.14 | FALSE |
| Adipose | Ablim1 | alternative polyA | XM_063288242.1 | 0.13 | 1 | 0.04 | 3.6e-05 | 5.93 | 3.01e-09 | 0.29 | FALSE |
| Adipose | Ablim1 | alternative polyA | XM_039110220.2 | 0.14 | 1 | 0.08 | 1.4e-09 | -5.67 | 1.40e-08 | 0.2 | FALSE |
| Adipose | Ablim1 | alternative polyA | XM_039110273.2 | 0.19 | 1 | 0.12 | 1.3e-13 | 5.68 | 1.37e-08 | 0.2 | FALSE |
| Adipose | Zdhhc6 | alternative polyA | XM_063268773.1 | 0.08 | 1 | 0.07 | 4.8e-08 | 5.28 | 1.30e-07 | 0.09 | FALSE |
| Adipose | Zdhhc6 | alternative polyA | XM_063268773.1 | 0.08 | 1 | 0.07 | 4.5e-08 | 5.28 | 1.30e-07 | 0.09 | FALSE |
| Adipose | Ablim1 | alternative TSS | XM_039110327.2 | 0.03 | 2818 | 0.01 | 7.3e-03 | 5.26 | 1.42e-07 | 0.4 | FALSE |
| Adipose | Gpam | alternative TSS | NM_017274.1 | 0.23 | 1 | 0.22 | 4.5e-24 | -5.66 | 1.48e-08 | 0.63 | FALSE |
| Adipose | Gpam | alternative TSS | XM_006231626.5 | 0.14 | 14 | 0.16 | 7.1e-17 | -5.66 | 1.48e-08 | 0.56 | FALSE |
| Adipose | Gpam | alternative TSS | NM_017274.1 | 0.23 | 1 | 0.22 | 4.7e-24 | -5.66 | 1.48e-08 | 0.63 | FALSE |
| Adipose | Gpam | alternative TSS | XM_006231626.5 | 0.23 | 1 | 0.22 | 8.3e-24 | 5.66 | 1.48e-08 | 0.63 | FALSE |
| Adipose | LOC102556644 | alternative TSS | XR_010063321.1 | 0.03 | 417 | 0.01 | 3.5e-02 | -7.05 | 1.85e-12 | 0.42 | FALSE |
| Adipose | LOC102556644 | alternative TSS | XR_590754.4 | 0.04 | 451 | 0.01 | 2.0e-02 | 7.16 | 7.95e-13 | 0.44 | FALSE |
| Adipose | Ablim1 | gene expression | Ablim1 | 0.48 | 288 | 0.36 | 2.5e-41 | 6.07 | 1.27e-09 | 0.71 | FALSE |
| Adipose | Cacul1 | gene expression | Cacul1 | 0.13 | 30 | 0.09 | 2.7e-10 | -5.85 | 4.90e-09 | 0 | FALSE |
| Adipose | Ces2c | gene expression | Ces2c | 0.12 | 46 | 0.07 | 4.0e-08 | -7.21 | 5.73e-13 | 0.12 | FALSE |
| Adipose | Dennd10 | gene expression | Dennd10 | 0.04 | 1 | 0.04 | 4.7e-05 | 8.78 | 1.66e-18 | 0.02 | FALSE |
| Adipose | Eno4 | gene expression | Eno4 | 0.09 | 40 | 0.07 | 1.7e-08 | 5.85 | 4.85e-09 | 0 | TRUE |
| Adipose | Grk5 | gene expression | Grk5 | 0.19 | 1480 | 0.24 | 3.9e-26 | 7.95 | 1.92e-15 | 0 | FALSE |
| Adipose | Gucy2g | gene expression | Gucy2g | 0.02 | 6 | 0.02 | 6.5e-03 | 5.44 | 5.48e-08 | 0.43 | FALSE |
| Adipose | LOC103691380 | gene expression | LOC103691380 | 0.06 | 51 | 0.01 | 9.4e-03 | 5.94 | 2.89e-09 | 0.2 | FALSE |
| Adipose | LOC120100065 | gene expression | LOC120100065 | 0.06 | 1 | 0.06 | 1.9e-07 | 6 | 2.01e-09 | 0.64 | FALSE |
| Adipose | LOC120100068 | gene expression | LOC120100068 | 0.03 | 1 | 0.02 | 4.3e-03 | 5.44 | 5.42e-08 | 0.03 | FALSE |
| Adipose | LOC134485255 | gene expression | LOC134485255 | 0.04 | 1 | 0.04 | 5.1e-05 | -5.58 | 2.35e-08 | 0.08 | FALSE |
| Adipose | LOC134485257 | gene expression | LOC134485257 | 0.08 | 1 | 0.06 | 4.0e-07 | 6.18 | 6.61e-10 | 0.85 | FALSE |
| Adipose | LOC134485258 | gene expression | LOC134485258 | 0.22 | 22 | 0.16 | 4.5e-17 | -6.15 | 7.99e-10 | 0.57 | FALSE |
| Adipose | Prdx3 | gene expression | Prdx3 | 0.19 | 1 | 0.24 | 1.6e-26 | 6.74 | 1.60e-11 | 0 | FALSE |
| Adipose | Sfxn4 | gene expression | Sfxn4 | 0.02 | 1 | 0.02 | 2.5e-03 | 9.77 | 1.46e-22 | 0.03 | FALSE |
| Adipose | Zfp933l1 | gene expression | Zfp933l1 | 0.05 | 19 | 0.06 | 4.1e-07 | -8.02 | 1.10e-15 | 0 | FALSE |
| Adipose | Ablim1 | isoform ratio | XM_039110288.2 | 0.2 | 1 | 0.14 | 5.1e-15 | 5.68 | 1.37e-08 | 0.2 | FALSE |
| Adipose | Gfra1 | isoform ratio | XM_039101762.2 | 0.04 | 1 | 0.01 | 1.2e-02 | 5.53 | 3.23e-08 | 0.04 | FALSE |
| Adipose | Gfra1 | isoform ratio | XM_063281839.1 | 0.09 | 1 | 0.05 | 2.0e-06 | -5.25 | 1.50e-07 | 0.34 | FALSE |
| Adipose | Gpam | isoform ratio | XM_063287765.1 | 0.05 | 1 | 0.04 | 6.7e-05 | 5.66 | 1.55e-08 | 0.11 | FALSE |
| Adipose | Ablim1 | intron excision ratio | chr1_266103166_266105494 | 0.05 | 1 | 0.03 | 6.9e-04 | -5.95 | 2.68e-09 | 0.17 | FALSE |
| Adipose | Ablim1 | intron excision ratio | chr1_266103172_266105494 | 0.29 | 168 | 0.09 | 2.0e-10 | 6.05 | 1.47e-09 | 0.44 | FALSE |
| Adipose | Ablim1 | intron excision ratio | chr1_266235524_266261021 | 0.03 | 1 | 0.03 | 3.7e-04 | -6.19 | 5.90e-10 | 0.09 | FALSE |
| Adipose | Ablim1 | intron excision ratio | chr1_266235524_266303657 | 0.03 | 1 | 0.03 | 3.5e-04 | 6.19 | 5.90e-10 | 0.09 | FALSE |
| Adipose | Afap1l2 | mRNA stability | Afap1l2 | 0.03 | 8 | 0.03 | 4.5e-04 | -5.88 | 4.20e-09 | 0.25 | FALSE |
| Adipose | Atrnl1 | mRNA stability | Atrnl1 | 0.11 | 10 | 0.05 | 2.8e-06 | 6.57 | 4.87e-11 | 0.4 | FALSE |
| Adipose | Emx2os | mRNA stability | Emx2os | 0.19 | 16 | 0.15 | 1.9e-16 | -5.98 | 2.20e-09 | 0 | FALSE |
| Adipose | Fam204a | mRNA stability | Fam204a | 0.04 | 57 | 0.01 | 1.7e-02 | -5.75 | 9.05e-09 | 0.03 | FALSE |
| Adipose | Gpam | mRNA stability | Gpam | 0.04 | 1 | 0.03 | 6.5e-04 | -5.58 | 2.35e-08 | 0.1 | FALSE |
| Adipose | LOC120100068 | mRNA stability | LOC120100068 | 0.31 | 2143 | 0.18 | 1.8e-19 | 8.18 | 2.89e-16 | 0 | FALSE |
| Adipose | Nhlrc2 | mRNA stability | Nhlrc2 | 0.03 | 2200 | 0.03 | 3.5e-04 | 5.69 | 1.25e-08 | 0.37 | FALSE |
| BLA | Ccdc186 | alternative polyA | XM_063268788.1 | 0.06 | 1 | 0.02 | 2.3e-02 | -5.73 | 1.03e-08 | 0.04 | FALSE |
| BLA | Ces2c | gene expression | Ces2c | 0.25 | 1 | 0.17 | 2.6e-09 | -8.63 | 6.28e-18 | 0.38 | FALSE |
| BLA | LOC134485258 | gene expression | LOC134485258 | 0.15 | 1 | 0.05 | 8.8e-04 | -5.65 | 1.61e-08 | 0.06 | FALSE |
| BLA | Nanos1 | gene expression | Nanos1 | 0.14 | 1 | 0.05 | 1.4e-03 | 5.64 | 1.74e-08 | 0.04 | FALSE |
| BLA | Rab11fip2 | gene expression | Rab11fip2 | 0.1 | 2416 | 0.04 | 2.2e-03 | -7.99 | 1.37e-15 | 0.21 | FALSE |
| BLA | Sfxn4 | gene expression | Sfxn4 | 0.07 | 1 | 0.02 | 3.4e-02 | -10 | 1.48e-23 | 0.04 | FALSE |
| BLA | Cacul1 | isoform ratio | NM_001014248.2 | 0.09 | 1822 | 0.02 | 3.1e-02 | 6.03 | 1.64e-09 | 0.1 | FALSE |
| BLA | Cacul1 | isoform ratio | XM_063270019.1 | 0.07 | 25 | 0.01 | 9.5e-02 | -5.42 | 6.07e-08 | 0.05 | FALSE |
| BLA | Ccdc186 | isoform ratio | NM_001427749.1 | 0.06 | 1 | 0 | 2.1e-01 | 5.79 | 7.03e-09 | 0.04 | FALSE |
| BLA | Gfra1 | isoform ratio | XM_008760514.4 | 0.19 | 1 | 0.04 | 2.0e-03 | -5.81 | 6.38e-09 | 0.09 | FALSE |
| BLA | LOC102551125 | isoform ratio | XR_010063314.1 | 0.17 | 2746 | 0.07 | 1.5e-04 | 6.27 | 3.51e-10 | 0.3 | FALSE |
| BLA | Fhip2a | intron excision ratio | chr1_266430137_266432655 | 0.1 | 24 | 0 | 2.5e-01 | 5.73 | 9.94e-09 | 0.12 | FALSE |
| BLA | Dclre1a | mRNA stability | Dclre1a | 0.16 | 22 | 0.05 | 1.0e-03 | 5.31 | 1.12e-07 | 0.09 | FALSE |
| BLA | Emx2os | mRNA stability | Emx2os | 0.3 | 26 | 0.12 | 9.6e-07 | 7.31 | 2.74e-13 | 0.02 | FALSE |
| BLA | LOC120100068 | mRNA stability | LOC120100068 | 0.37 | 1 | 0.11 | 3.2e-06 | -8.07 | 6.98e-16 | 0.03 | FALSE |
| BLA | Rab11fip2 | mRNA stability | Rab11fip2 | 0.09 | 1 | 0.06 | 3.9e-04 | 9.1 | 8.96e-20 | 0.04 | FALSE |
| Brain | Cacul1 | alternative TSS | XM_039085812.2 | 0.03 | 1 | 0.01 | 2.0e-02 | -5.61 | 1.98e-08 | 0.03 | FALSE |
| Brain | Dclre1a | alternative TSS | XM_039103172.2 | 0.05 | 10 | 0.04 | 1.5e-04 | 5.9 | 3.58e-09 | 0.01 | FALSE |
| Brain | Gpam | alternative TSS | XM_006231626.5 | 0.09 | 2183 | 0.09 | 1.1e-08 | 5.5 | 3.78e-08 | 0.59 | FALSE |
| Brain | Trub1 | alternative TSS | XM_039084723.2 | 0.03 | 1 | 0.01 | 1.7e-02 | 5.97 | 2.44e-09 | 0.04 | FALSE |
| Brain | Afap1l2 | gene expression | Afap1l2 | 0.2 | 24 | 0.21 | 1.9e-19 | 6.38 | 1.75e-10 | 0.43 | FALSE |
| Brain | Ccdc186 | gene expression | Ccdc186 | 0.06 | 1 | 0.06 | 7.7e-06 | -5.67 | 1.45e-08 | 0.1 | FALSE |
| Brain | Ces2c | gene expression | Ces2c | 0.23 | 1 | 0.27 | 2.7e-25 | -8.77 | 1.80e-18 | 0.68 | FALSE |
| Brain | Fam204a | gene expression | Fam204a | 0.16 | 2301 | 0.12 | 2.3e-11 | 5.47 | 4.55e-08 | 0 | FALSE |
| Brain | Fhip2a | gene expression | Fhip2a | 0.06 | 1 | 0.09 | 1.7e-08 | 5.76 | 8.49e-09 | 0.28 | FALSE |
| Brain | LOC120097692 | gene expression | LOC120097692 | 0.07 | 1 | 0.09 | 2.6e-08 | 5.77 | 7.93e-09 | 0.67 | FALSE |
| Brain | LOC134485255 | gene expression | LOC134485255 | 0.03 | 1941 | 0.02 | 6.4e-03 | -6.05 | 1.48e-09 | 0.25 | FALSE |
| Brain | LOC134485258 | gene expression | LOC134485258 | 0.16 | 2878 | 0.16 | 1.8e-14 | 6.43 | 1.29e-10 | 0.59 | FALSE |
| Brain | Nanos1 | gene expression | Nanos1 | 0.11 | 1686 | 0.09 | 1.3e-08 | -8.96 | 3.32e-19 | 0.51 | FALSE |
| Brain | Plekhs1 | gene expression | Plekhs1 | 0.05 | 2251 | 0.06 | 6.2e-06 | 5.38 | 7.54e-08 | 0.53 | FALSE |
| Brain | Rab11fip2 | gene expression | Rab11fip2 | 0.1 | 1 | 0.06 | 3.8e-06 | 6.94 | 3.87e-12 | 0.02 | FALSE |
| Brain | Sfxn4 | gene expression | Sfxn4 | 0.07 | 1433 | 0.08 | 4.5e-08 | 8.54 | 1.34e-17 | 0.09 | FALSE |
| Brain | Zfp933l1 | gene expression | Zfp933l1 | 0.05 | 2 | 0.06 | 5.3e-06 | 8.76 | 1.87e-18 | 0.04 | FALSE |
| Brain | Cacul1 | isoform ratio | NM_001014248.2 | 0.11 | 36 | 0.1 | 1.6e-09 | -8.93 | 4.29e-19 | 0.86 | FALSE |
| Brain | Cacul1 | isoform ratio | NM_001416001.1 | 0.1 | 1 | 0.08 | 3.5e-08 | 10.41 | 2.14e-25 | 0.14 | FALSE |
| Brain | Gfra1 | isoform ratio | XM_008760514.4 | 0.18 | 2055 | 0.14 | 8.6e-13 | 6.08 | 1.18e-09 | 0.86 | FALSE |
| Brain | LOC102551125 | isoform ratio | XR_010063314.1 | 0.08 | 2746 | 0.07 | 2.1e-07 | 6.47 | 9.80e-11 | 0.49 | FALSE |
| Brain | Trub1 | isoform ratio | XM_039084721.2 | 0.35 | 247 | 0.29 | 1.4e-27 | 5.44 | 5.37e-08 | 0 | FALSE |
| Brain | Cacul1 | intron excision ratio | chr1_269663603_269672274 | 0.11 | 1 | 0.08 | 4.3e-08 | -10.41 | 2.14e-25 | 0.14 | FALSE |
| Brain | LOC134485267 | intron excision ratio | chr1_269851730_269854168 | 0.02 | 1 | 0.03 | 1.9e-03 | -8.92 | 4.62e-19 | 0.03 | FALSE |
| Brain | Trub1 | intron excision ratio | chr1_266530871_266540231 | 0.04 | 6 | 0.02 | 1.1e-02 | 6.37 | 1.87e-10 | 0.28 | FALSE |
| Brain | Afap1l2 | mRNA stability | Afap1l2 | 0.57 | 39 | 0.45 | 3.8e-46 | -5.98 | 2.25e-09 | 0.33 | FALSE |
| Brain | Atrnl1 | mRNA stability | Atrnl1 | 0.25 | 2707 | 0.3 | 1.7e-28 | -5.36 | 8.41e-08 | 0.33 | FALSE |
| Brain | Grk5 | mRNA stability | Grk5 | 0.03 | 1480 | 0.02 | 2.3e-03 | -8.45 | 2.87e-17 | 0.1 | FALSE |
| Brain | LOC120100068 | mRNA stability | LOC120100068 | 0.5 | 9 | 0.2 | 1.0e-18 | 6.17 | 6.83e-10 | 0 | FALSE |
| Brain | Nrap | mRNA stability | Nrap | 0.04 | 1 | 0.03 | 1.1e-03 | 5.58 | 2.36e-08 | 0.03 | FALSE |
| Brain | Trub1 | mRNA stability | Trub1 | 0.31 | 2786 | 0.27 | 1.4e-25 | 5.98 | 2.22e-09 | 0 | FALSE |
| Eye | Casp7 | gene expression | Casp7 | 0.59 | 1 | 0.11 | 1.0e-02 | -5.99 | 2.07e-09 | 0.06 | FALSE |
| Eye | Ablim1 | isoform ratio | NM_001395155.1 | 0.33 | 1 | 0.17 | 1.5e-03 | 5.68 | 1.37e-08 | 0.05 | FALSE |
| Eye | Emx2os | mRNA stability | Emx2os | 0.71 | 45 | 0.2 | 5.4e-04 | -8.17 | 3.16e-16 | 0.14 | FALSE |
| IC | Gpam | alternative TSS | XM_006231626.5 | 0.09 | 1 | 0.09 | 1.9e-04 | -5.62 | 1.96e-08 | 0.05 | FALSE |
| IC | Ablim1 | gene expression | Ablim1 | 0.07 | 1 | 0.05 | 2.9e-03 | 5.92 | 3.30e-09 | 0.05 | FALSE |
| IC | Casp7 | gene expression | Casp7 | 0.07 | 5 | 0.06 | 2.0e-03 | 5.4 | 6.80e-08 | 0.48 | FALSE |
| IC | Ces2c | gene expression | Ces2c | 0.26 | 1 | 0.22 | 1.9e-09 | -8.62 | 6.80e-18 | 0.36 | FALSE |
| IC | Emx2os | gene expression | Emx2os | 0.57 | 1 | 0.39 | 1.1e-17 | 5.22 | 1.78e-07 | 0 | FALSE |
| IC | Grk5 | gene expression | Grk5 | 0.12 | 1 | 0.07 | 7.4e-04 | -10.01 | 1.42e-23 | 0.04 | FALSE |
| IC | LOC102551125 | gene expression | LOC102551125 | 0.18 | 1 | 0.18 | 6.9e-08 | -5.69 | 1.29e-08 | 0.18 | FALSE |
| IC | LOC120097692 | gene expression | LOC120097692 | 0.16 | 1 | 0.12 | 7.3e-06 | 5.8 | 6.45e-09 | 0.24 | FALSE |
| IC | LOC134485258 | gene expression | LOC134485258 | 0.46 | 1 | 0.27 | 9.1e-12 | -6.2 | 5.70e-10 | 0.84 | FALSE |
| IC | Sfxn4 | gene expression | Sfxn4 | 0.18 | 95 | 0.13 | 3.1e-06 | -6.55 | 5.66e-11 | 0.01 | FALSE |
| IC | Cacul1 | isoform ratio | NM_001014248.2 | 0.1 | 5 | 0.04 | 8.5e-03 | 10.5 | 8.53e-26 | 0.5 | FALSE |
| IC | Cacul1 | isoform ratio | NM_001416001.1 | 0.1 | 1 | 0.06 | 1.1e-03 | 9.2 | 3.61e-20 | 0.04 | FALSE |
| IC | Gfra1 | isoform ratio | XM_008760514.4 | 0.21 | 1 | 0.07 | 6.7e-04 | -5.54 | 3.08e-08 | 0.08 | FALSE |
| IC | LOC102551125 | isoform ratio | XR_010063314.1 | 0.12 | 2746 | 0.07 | 5.1e-04 | 6.58 | 4.73e-11 | 0.45 | FALSE |
| IC | Afap1l2 | intron excision ratio | chr1_265989926_265993160 | 0.07 | 5 | 0.06 | 2.4e-03 | -5.41 | 6.37e-08 | 0.24 | FALSE |
| IC | LOC120100061 | intron excision ratio | chr1_264792163_264792666 | 0.08 | 3 | 0.05 | 3.2e-03 | -6.2 | 5.65e-10 | 0.34 | FALSE |
| IC | Afap1l2 | mRNA stability | Afap1l2 | 0.13 | 2481 | 0.11 | 2.9e-05 | -6.15 | 7.73e-10 | 0.48 | FALSE |
| IC | Atrnl1 | mRNA stability | Atrnl1 | 0.24 | 2707 | 0.21 | 2.3e-09 | -5.99 | 2.11e-09 | 0.4 | FALSE |
| IC | Dclre1a | mRNA stability | Dclre1a | 0.15 | 1 | 0.12 | 7.5e-06 | -5.5 | 3.87e-08 | 0.06 | FALSE |
| IC | Nhlrc2 | mRNA stability | Nhlrc2 | 0.28 | 1 | 0.13 | 3.0e-06 | 5.54 | 2.97e-08 | 0.07 | FALSE |
| IL | Nrap | alternative TSS | XM_008760535.4 | 0.12 | 2125 | 0.1 | 2.1e-03 | -5.56 | 2.73e-08 | 0.38 | FALSE |
| IL | Ces2c | gene expression | Ces2c | 0.38 | 1 | 0.3 | 5.3e-08 | -8.63 | 6.28e-18 | 0.22 | FALSE |
| IL | Dclre1a | gene expression | Dclre1a | 0.52 | 84 | 0.32 | 1.4e-08 | -6.29 | 3.10e-10 | 0 | FALSE |
| IL | Gfra1 | gene expression | Gfra1 | 0.44 | 24 | 0.23 | 3.6e-06 | -5.24 | 1.62e-07 | 0.73 | FALSE |
| IL | LOC102547573 | gene expression | LOC102547573 | 0.37 | 1 | 0.3 | 7.0e-08 | -5.67 | 1.40e-08 | 0.13 | FALSE |
| IL | LOC134485255 | gene expression | LOC134485255 | 0.19 | 1941 | 0.07 | 7.9e-03 | -5.97 | 2.40e-09 | 0.33 | FALSE |
| IL | LOC134485258 | gene expression | LOC134485258 | 0.48 | 28 | 0.33 | 8.3e-09 | 6.06 | 1.34e-09 | 0.59 | FALSE |
| IL | Afap1l2 | mRNA stability | Afap1l2 | 0.27 | 1 | 0.16 | 1.3e-04 | 5.79 | 7.03e-09 | 0.06 | FALSE |
| IL | Atrnl1 | mRNA stability | Atrnl1 | 0.22 | 2707 | 0.14 | 2.6e-04 | -5.49 | 3.92e-08 | 0.41 | FALSE |
| IL | Sfxn4 | mRNA stability | Sfxn4 | 0.51 | 1 | 0.22 | 4.5e-06 | -8.78 | 1.69e-18 | 0.05 | FALSE |
| LHb | Casp7 | gene expression | Casp7 | 0.14 | 2158 | 0.05 | 2.6e-02 | 6.28 | 3.48e-10 | 0.44 | FALSE |
| LHb | Ces2c | gene expression | Ces2c | 0.26 | 73 | 0.21 | 1.2e-05 | -7.65 | 2.07e-14 | 0.56 | FALSE |
| LHb | Dclre1a | gene expression | Dclre1a | 0.41 | 2199 | 0.3 | 5.8e-08 | 5.87 | 4.49e-09 | 0.2 | FALSE |
| LHb | Fam204a | gene expression | Fam204a | 0.23 | 2301 | 0.13 | 6.0e-04 | 5.87 | 4.41e-09 | 0.05 | FALSE |
| LHb | Rab11fip2 | gene expression | Rab11fip2 | 0.24 | 1 | 0.1 | 2.3e-03 | 6.94 | 3.87e-12 | 0.05 | FALSE |
| LHb | Fhip2a | isoform ratio | NM_001400898.1 | 0.21 | 2880 | 0.07 | 9.0e-03 | -5.31 | 1.12e-07 | 0.08 | FALSE |
| LHb | Vti1a | intron excision ratio | chr1_264431674_264436174 | 0.14 | 13 | 0.1 | 2.5e-03 | 6.4 | 1.58e-10 | 0.52 | FALSE |
| LHb | Afap1l2 | mRNA stability | Afap1l2 | 0.5 | 1 | 0.32 | 2.4e-08 | 5.67 | 1.40e-08 | 0.12 | FALSE |
| LHb | Atrnl1 | mRNA stability | Atrnl1 | 0.22 | 2707 | 0.07 | 8.3e-03 | -5.34 | 9.54e-08 | 0.43 | FALSE |
| Liver | Atrnl1 | alternative polyA | XM_063281046.1 | 0.07 | 1 | 0.07 | 9.6e-09 | 5.76 | 8.59e-09 | 0.29 | FALSE |
| Liver | Atrnl1 | alternative polyA | XM_063281046.1 | 0.08 | 1 | 0.07 | 1.4e-08 | 5.76 | 8.59e-09 | 0.29 | FALSE |
| Liver | Trub1 | alternative polyA | NM_001012173.1 | 0.1 | 29 | 0.12 | 7.6e-13 | -6.24 | 4.34e-10 | 0.46 | FALSE |
| Liver | Trub1 | alternative polyA | XM_039084701.2 | 0.1 | 31 | 0.12 | 9.2e-13 | 6.23 | 4.52e-10 | 0.47 | FALSE |
| Liver | Trub1 | alternative polyA | NM_001012173.1 | 0.09 | 2786 | 0.12 | 7.0e-13 | -6.05 | 1.45e-09 | 0.43 | FALSE |
| Liver | Trub1 | alternative polyA | XM_039084701.2 | 0.08 | 2786 | 0.1 | 4.4e-11 | 6.33 | 2.51e-10 | 0.45 | FALSE |
| Liver | Acsl5 | gene expression | Acsl5 | 0.05 | 1 | 0.04 | 4.7e-05 | -5.84 | 5.15e-09 | 0.35 | FALSE |
| Liver | Gpam | gene expression | Gpam | 0.13 | 170 | 0.09 | 1.8e-10 | -5.26 | 1.47e-07 | 0.5 | FALSE |
| Liver | LOC134485255 | gene expression | LOC134485255 | 0.03 | 1 | 0.02 | 6.6e-03 | 6.16 | 7.09e-10 | 0.21 | FALSE |
| Liver | Nanos1 | gene expression | Nanos1 | 0.08 | 1 | 0.06 | 5.6e-07 | 6.46 | 1.05e-10 | 0 | FALSE |
| Liver | Nhlrc2 | gene expression | Nhlrc2 | 0.04 | 13 | 0.03 | 3.6e-04 | 6.42 | 1.32e-10 | 0.28 | FALSE |
| Liver | Cacul1 | isoform ratio | NM_001014248.2 | 0.03 | 1822 | 0.01 | 7.0e-03 | 9.4 | 5.24e-21 | 0.33 | FALSE |
| Liver | Dennd10 | isoform ratio | NM_001398802.1 | 0.04 | 1 | 0.02 | 1.7e-03 | 5.57 | 2.62e-08 | 0.03 | FALSE |
| Liver | Habp2 | isoform ratio | NM_001001505.2 | 0.61 | 1 | 0.22 | 1.4e-24 | -5.48 | 4.30e-08 | 0.05 | FALSE |
| Liver | Habp2 | isoform ratio | XM_006231633.5 | 0.62 | 1 | 0.23 | 8.7e-25 | 5.48 | 4.30e-08 | 0.05 | FALSE |
| Liver | Trub1 | isoform ratio | NM_001012173.1 | 0.06 | 25 | 0.07 | 1.5e-08 | -6.21 | 5.36e-10 | 0.42 | FALSE |
| Liver | Habp2 | intron excision ratio | chr1_265332440_265341833 | 0.73 | 75 | 0.44 | 1.3e-53 | -5.44 | 5.19e-08 | 0.05 | FALSE |
| Liver | Habp2 | intron excision ratio | chr1_265341943_265343930 | 0.6 | 34 | 0.41 | 5.5e-49 | -5.48 | 4.27e-08 | 0.06 | FALSE |
| Liver | Tcf7l2 | intron excision ratio | chr1_264792701_264865777 | 0.03 | 16 | 0.02 | 9.0e-04 | -5.88 | 4.02e-09 | 0.54 | FALSE |
| Liver | Ces2c | mRNA stability | Ces2c | 0.02 | 1 | 0.01 | 7.1e-03 | 8.83 | 1.09e-18 | 0.04 | FALSE |
| Liver | Grk5 | mRNA stability | Grk5 | 0.03 | 1480 | 0.01 | 3.6e-02 | -9.23 | 2.68e-20 | 0.2 | FALSE |
| Liver | Habp2 | mRNA stability | Habp2 | 0.67 | 48 | 0.48 | 2.4e-59 | 5.51 | 3.61e-08 | 0.06 | FALSE |
| Liver | Zdhhc6 | mRNA stability | Zdhhc6 | 0.02 | 1 | 0.02 | 1.3e-03 | 5.84 | 5.15e-09 | 0.04 | FALSE |
| NAcc | Ablim1 | alternative TSS | XM_039110220.2 | 0.03 | 2818 | 0.02 | 1.1e-03 | 6.42 | 1.36e-10 | 0.29 | FALSE |
| NAcc | Fhip2a | alternative TSS | NM_001400898.1 | 0.04 | 7 | 0.03 | 3.9e-05 | -6.08 | 1.21e-09 | 0.49 | FALSE |
| NAcc | Fhip2a | alternative TSS | XM_039101457.2 | 0.04 | 101 | 0.03 | 2.7e-05 | -6.55 | 5.83e-11 | 0.52 | FALSE |
| NAcc | Gfra1 | alternative TSS | XM_008760514.4 | 0.03 | 2055 | 0.02 | 2.3e-04 | 6.06 | 1.36e-09 | 0.08 | FALSE |
| NAcc | Gfra1 | alternative TSS | XM_039101759.2 | 0.04 | 2055 | 0.03 | 4.5e-05 | 6.06 | 1.34e-09 | 0.07 | FALSE |
| NAcc | Gpam | alternative TSS | XM_006231626.5 | 0.11 | 2183 | 0.08 | 5.9e-12 | 5.43 | 5.79e-08 | 0.6 | FALSE |
| NAcc | Nrap | alternative TSS | XM_008760535.4 | 0.02 | 35 | 0.02 | 4.2e-04 | -6.16 | 7.33e-10 | 0.12 | FALSE |
| NAcc | Acsl5 | gene expression | Acsl5 | 0.08 | 10 | 0.06 | 4.1e-09 | -5.73 | 1.02e-08 | 0.39 | FALSE |
| NAcc | Afap1l2 | gene expression | Afap1l2 | 0.09 | 2481 | 0.07 | 1.1e-10 | -5.99 | 2.09e-09 | 0.1 | FALSE |
| NAcc | Cacul1 | gene expression | Cacul1 | 0.12 | 1 | 0.09 | 8.7e-14 | 5.64 | 1.74e-08 | 0 | FALSE |
| NAcc | Casp7 | gene expression | Casp7 | 0.11 | 1 | 0.1 | 4.9e-15 | -5.43 | 5.58e-08 | 0.04 | FALSE |
| NAcc | Ces2c | gene expression | Ces2c | 0.15 | 105 | 0.21 | 1.0e-31 | -8.14 | 3.96e-16 | 0.75 | FALSE |
| NAcc | Hspa12a | gene expression | Hspa12a | 0.07 | 53 | 0.03 | 2.3e-05 | -5.4 | 6.51e-08 | 0.22 | FALSE |
| NAcc | LOC134485255 | gene expression | LOC134485255 | 0.03 | 1941 | 0.02 | 4.2e-04 | -6.05 | 1.47e-09 | 0.33 | TRUE |
| NAcc | LOC134485258 | gene expression | LOC134485258 | 0.07 | 2878 | 0.08 | 1.7e-12 | 6.59 | 4.52e-11 | 0.43 | FALSE |
| NAcc | LOC134485268 | gene expression | LOC134485268 | 0.02 | 1 | 0.01 | 5.3e-03 | 6.22 | 4.94e-10 | 0.03 | FALSE |
| NAcc | Prlhr | gene expression | Prlhr | 0.16 | 116 | 0.15 | 5.0e-22 | -10.37 | 3.48e-25 | 0.94 | FALSE |
| NAcc | Rab11fip2 | gene expression | Rab11fip2 | 0.02 | 1 | 0.02 | 1.6e-03 | 9.06 | 1.34e-19 | 0.02 | FALSE |
| NAcc | Sfxn4 | gene expression | Sfxn4 | 0.05 | 16 | 0.06 | 1.5e-09 | 10.36 | 3.82e-25 | 0.12 | TRUE |
| NAcc | Tectb | gene expression | Tectb | 0.02 | 2229 | 0.01 | 2.3e-03 | 5.84 | 5.22e-09 | 0.22 | FALSE |
| NAcc | Ablim1 | isoform ratio | NM_001395155.1 | 0.02 | 2818 | 0.02 | 2.2e-04 | 5.21 | 1.87e-07 | 0.39 | FALSE |
| NAcc | Cacul1 | isoform ratio | NM_001014248.2 | 0.16 | 1 | 0.05 | 9.7e-08 | -10.42 | 2.01e-25 | 0.15 | FALSE |
| NAcc | Fhip2a | isoform ratio | NM_001400898.1 | 0.03 | 101 | 0.03 | 9.8e-05 | 6.67 | 2.47e-11 | 0.5 | FALSE |
| NAcc | Fhip2a | isoform ratio | XM_039101457.2 | 0.05 | 103 | 0.04 | 5.0e-07 | -6.53 | 6.77e-11 | 0.55 | FALSE |
| NAcc | Gfra1 | isoform ratio | NM_012959.2 | 0.06 | 1 | 0.04 | 9.7e-07 | 5.33 | 9.93e-08 | 0.42 | FALSE |
| NAcc | Gfra1 | isoform ratio | XM_008760514.4 | 0.13 | 2055 | 0.08 | 2.3e-12 | 6.83 | 8.22e-12 | 0.84 | FALSE |
| NAcc | LOC102551125 | isoform ratio | XR_010063314.1 | 0.07 | 2746 | 0.05 | 7.8e-08 | 5.54 | 3.08e-08 | 0 | FALSE |
| NAcc | Trub1 | isoform ratio | XM_008760538.4 | 0.07 | 2786 | 0.06 | 4.5e-10 | 6.45 | 1.12e-10 | 0.52 | FALSE |
| NAcc | Gfra1 | intron excision ratio | chr1_267555808_267556360 | 0.03 | 2055 | 0.01 | 6.3e-03 | 6.26 | 3.97e-10 | 0.15 | FALSE |
| NAcc | Gfra1 | intron excision ratio | chr1_267555808_267556405 | 0.04 | 2055 | 0.04 | 3.3e-07 | -5.36 | 8.35e-08 | 0.05 | FALSE |
| NAcc | LOC134485267 | intron excision ratio | chr1_269851730_269854168 | 0.07 | 1717 | 0.04 | 5.0e-07 | 7.82 | 5.35e-15 | 0.86 | TRUE |
| NAcc | Trub1 | intron excision ratio | chr1_266520922_266525323 | 0.04 | 2786 | 0.03 | 8.5e-05 | -5.23 | 1.67e-07 | 0 | FALSE |
| NAcc | Afap1l2 | mRNA stability | Afap1l2 | 0.16 | 42 | 0.16 | 1.9e-23 | -6.15 | 7.68e-10 | 0.34 | FALSE |
| NAcc | Emx2os | mRNA stability | Emx2os | 0.07 | 1 | 0.07 | 1.6e-10 | 5.37 | 7.69e-08 | 0 | FALSE |
| NAcc | Grk5 | mRNA stability | Grk5 | 0.04 | 1 | 0.05 | 9.3e-08 | 5.97 | 2.40e-09 | 0 | FALSE |
| OFC | Fhip2a | alternative TSS | NM_001400898.1 | 0.32 | 1 | 0.07 | 7.8e-03 | 5.98 | 2.18e-09 | 0.05 | FALSE |
| OFC | Fhip2a | alternative TSS | XM_039101457.2 | 0.27 | 1 | 0.07 | 1.2e-02 | -5.98 | 2.18e-09 | 0.05 | FALSE |
| OFC | Grk5 | alternative TSS | XM_039088827.2 | 0.1 | 1 | 0.13 | 7.1e-04 | -8.95 | 3.51e-19 | 0.05 | FALSE |
| OFC | Ccdc186 | gene expression | Ccdc186 | 0.22 | 19 | 0.15 | 1.8e-04 | 5.51 | 3.63e-08 | 0.26 | FALSE |
| OFC | Ces2c | gene expression | Ces2c | 0.29 | 1 | 0.3 | 5.7e-08 | -8.81 | 1.22e-18 | 0.5 | FALSE |
| OFC | LOC134485255 | gene expression | LOC134485255 | 0.15 | 1 | 0.12 | 8.4e-04 | 5.52 | 3.41e-08 | 0.05 | FALSE |
| OFC | LOC134485266 | gene expression | LOC134485266 | 0.26 | 2202 | 0.11 | 1.2e-03 | 6.48 | 8.92e-11 | 0.13 | FALSE |
| OFC | Pnlip | gene expression | Pnlip | 0.18 | 2151 | 0.11 | 1.6e-03 | 5.83 | 5.43e-09 | 0.28 | FALSE |
| OFC | Rab11fip2 | gene expression | Rab11fip2 | 0.27 | 165 | 0.21 | 9.4e-06 | 9.68 | 3.51e-22 | 0.34 | FALSE |
| OFC | Sfxn4 | gene expression | Sfxn4 | 0.47 | 39 | 0.28 | 2.9e-07 | 8.5 | 1.92e-17 | 0.03 | FALSE |
| OFC | Grk5 | isoform ratio | XM_039088810.2 | 0.21 | 1 | 0.14 | 2.9e-04 | -5.62 | 1.92e-08 | 0.05 | FALSE |
| OFC | Trub1 | isoform ratio | XM_039084721.2 | 0.14 | 369 | 0.14 | 3.9e-04 | 6.39 | 1.66e-10 | 0.22 | FALSE |
| OFC | Afap1l2 | mRNA stability | Afap1l2 | 0.65 | 2481 | 0.4 | 2.0e-10 | -5.98 | 2.20e-09 | 0.31 | FALSE |
| OFC | Atrnl1 | mRNA stability | Atrnl1 | 0.25 | 1 | 0.16 | 1.2e-04 | 5.7 | 1.23e-08 | 0.05 | TRUE |
| OFC | Rab11fip2 | mRNA stability | Rab11fip2 | 0.27 | 21 | 0.18 | 5.8e-05 | 9.59 | 8.69e-22 | 0.42 | FALSE |
| PL | Cacul1 | alternative TSS | XM_063270019.1 | 0.04 | 1822 | 0.01 | 7.7e-03 | -7.39 | 1.49e-13 | 0.09 | FALSE |
| PL | Fhip2a | alternative TSS | NM_001400898.1 | 0.08 | 1 | 0.07 | 5.5e-08 | 6.02 | 1.71e-09 | 0.65 | FALSE |
| PL | Fhip2a | alternative TSS | XM_039101457.2 | 0.07 | 1 | 0.06 | 2.8e-07 | -6.02 | 1.71e-09 | 0.65 | FALSE |
| PL | Gpam | alternative TSS | XM_063287765.1 | 0.04 | 1 | 0.04 | 6.5e-05 | 5.59 | 2.30e-08 | 0.1 | FALSE |
| PL | Casp7 | gene expression | Casp7 | 0.12 | 5 | 0.14 | 9.9e-15 | 5.87 | 4.27e-09 | 0.66 | FALSE |
| PL | Ccdc186 | gene expression | Ccdc186 | 0.06 | 2221 | 0.04 | 1.2e-05 | 5.47 | 4.39e-08 | 0.02 | FALSE |
| PL | Ces2c | gene expression | Ces2c | 0.64 | 32 | 0.37 | 6.7e-43 | 8.74 | 2.35e-18 | 0.75 | FALSE |
| PL | Gfra1 | gene expression | Gfra1 | 0.35 | 1 | 0.2 | 9.3e-22 | 5.65 | 1.65e-08 | 0.83 | FALSE |
| PL | Grk5 | gene expression | Grk5 | 0.02 | 82 | 0.01 | 1.3e-02 | -7.07 | 1.56e-12 | 0.06 | FALSE |
| PL | LOC134485258 | gene expression | LOC134485258 | 0.22 | 115 | 0.27 | 4.5e-29 | -5.95 | 2.65e-09 | 0.38 | FALSE |
| PL | Nanos1 | gene expression | Nanos1 | 0.11 | 1686 | 0.06 | 1.9e-07 | -7.01 | 2.33e-12 | 0.26 | FALSE |
| PL | Prlhr | gene expression | Prlhr | 0.03 | 1 | 0 | 1.1e-01 | -5.47 | 4.59e-08 | 0.03 | FALSE |
| PL | Sfxn4 | gene expression | Sfxn4 | 0.1 | 1433 | 0.1 | 4.4e-11 | 9.69 | 3.36e-22 | 0.02 | FALSE |
| PL | Tectb | gene expression | Tectb | 0.04 | 2229 | 0.04 | 7.3e-05 | 5.77 | 7.74e-09 | 0.28 | FALSE |
| PL | Zfp933l1 | gene expression | Zfp933l1 | 0.05 | 74 | 0.03 | 2.3e-04 | -7.11 | 1.13e-12 | 0.06 | FALSE |
| PL | Cacul1 | isoform ratio | NM_001014248.2 | 0.02 | 1822 | 0.01 | 1.3e-02 | 10.94 | 7.15e-28 | 0.76 | TRUE |
| PL | Cacul1 | isoform ratio | XM_063270019.1 | 0.04 | 1822 | 0.02 | 1.4e-03 | -8.22 | 1.95e-16 | 0.12 | FALSE |
| PL | Fhip2a | isoform ratio | NM_001400898.1 | 0.07 | 1 | 0.06 | 1.9e-07 | 6.02 | 1.71e-09 | 0.64 | FALSE |
| PL | Fhip2a | isoform ratio | XM_039101457.2 | 0.07 | 1 | 0.06 | 4.8e-07 | -6.02 | 1.71e-09 | 0.64 | FALSE |
| PL | Gfra1 | isoform ratio | XM_063281839.1 | 0.05 | 7 | 0.02 | 3.5e-03 | 5.55 | 2.92e-08 | 0.72 | FALSE |
| PL | LOC102551125 | isoform ratio | XR_010063314.1 | 0.27 | 2746 | 0.11 | 6.4e-12 | 5.91 | 3.42e-09 | 0 | FALSE |
| PL | Afap1l2 | mRNA stability | Afap1l2 | 0.2 | 38 | 0.19 | 3.5e-20 | 6.21 | 5.37e-10 | 0.36 | FALSE |
| PL | Atrnl1 | mRNA stability | Atrnl1 | 0.1 | 2707 | 0.11 | 4.1e-12 | -5.56 | 2.71e-08 | 0.46 | FALSE |
| PL | Emx2os | mRNA stability | Emx2os | 0.22 | 5 | 0.12 | 2.8e-13 | -5.22 | 1.78e-07 | 0 | FALSE |
| PL | Nhlrc2 | mRNA stability | Nhlrc2 | 0.04 | 2200 | 0.03 | 2.7e-04 | -6.27 | 3.69e-10 | 0.43 | FALSE |
| pVTA | Gfra1 | alternative TSS | XM_008760514.4 | 0.06 | 2055 | 0.06 | 6.6e-06 | 5.21 | 1.91e-07 | 0.06 | FALSE |
| pVTA | Gfra1 | alternative TSS | XM_039101759.2 | 0.06 | 2055 | 0.06 | 7.8e-06 | 5.28 | 1.31e-07 | 0.05 | FALSE |
| pVTA | Acsl5 | gene expression | Acsl5 | 0.03 | 1 | 0.03 | 2.5e-03 | -5.6 | 2.15e-08 | 0.04 | FALSE |
| pVTA | Ces2c | gene expression | Ces2c | 0.34 | 1 | 0.35 | 2.5e-29 | -8.72 | 2.75e-18 | 0.59 | FALSE |
| pVTA | Emx2os | gene expression | Emx2os | 0.25 | 1 | 0.12 | 1.0e-09 | 5.45 | 5.00e-08 | 0 | FALSE |
| pVTA | Fam204a | gene expression | Fam204a | 0.07 | 1 | 0.04 | 1.5e-04 | -5.56 | 2.62e-08 | 0.03 | FALSE |
| pVTA | LOC102553657 | gene expression | LOC102553657 | 0.07 | 8 | 0.07 | 2.5e-06 | 5.8 | 6.70e-09 | 0.05 | FALSE |
| pVTA | LOC134485258 | gene expression | LOC134485258 | 0.1 | 40 | 0.1 | 1.1e-08 | -6.43 | 1.31e-10 | 0.47 | FALSE |
| pVTA | Nanos1 | gene expression | Nanos1 | 0.12 | 103 | 0.05 | 1.4e-04 | 5.93 | 3.07e-09 | 0.04 | FALSE |
| pVTA | Sfxn4 | gene expression | Sfxn4 | 0.06 | 1433 | 0.04 | 3.2e-04 | 10.05 | 9.01e-24 | 0.44 | FALSE |
| pVTA | Gfra1 | isoform ratio | XM_008760514.4 | 0.4 | 78 | 0.2 | 8.4e-16 | -6.74 | 1.54e-11 | 0.84 | FALSE |
| pVTA | Nrap | intron excision ratio | chr1_265376925_265377983 | 0.03 | 2125 | 0.01 | 2.0e-02 | -5.35 | 8.76e-08 | 0.46 | FALSE |
| pVTA | Afap1l2 | mRNA stability | Afap1l2 | 0.25 | 20 | 0.29 | 2.8e-23 | -5.88 | 4.19e-09 | 0.36 | FALSE |
| pVTA | Atrnl1 | mRNA stability | Atrnl1 | 0.05 | 1 | 0.05 | 6.0e-05 | 5.92 | 3.30e-09 | 0.18 | FALSE |
| pVTA | Casp7 | mRNA stability | Casp7 | 0.28 | 2158 | 0.34 | 7.0e-28 | -5.45 | 5.14e-08 | 0.41 | FALSE |
| pVTA | Dclre1a | mRNA stability | Dclre1a | 0.11 | 1 | 0.13 | 7.2e-11 | -5.87 | 4.35e-09 | 0.5 | FALSE |
| pVTA | Grk5 | mRNA stability | Grk5 | 0.06 | 1480 | 0.05 | 6.5e-05 | -9.4 | 5.64e-21 | 0.16 | FALSE |
| pVTA | Hspa12a | mRNA stability | Hspa12a | 0.19 | 2104 | 0.14 | 5.4e-11 | 5.4 | 6.51e-08 | 0.03 | FALSE |
| RMTg | Fam204a | gene expression | Fam204a | 0.19 | 2296 | 0.01 | 1.4e-01 | 7.31 | 2.63e-13 | 0.12 | FALSE |
| RMTg | LOC134485258 | gene expression | LOC134485258 | 0.1 | 2878 | 0.07 | 6.1e-03 | 5.79 | 7.09e-09 | 0.35 | FALSE |
| RMTg | Sfxn4 | intron excision ratio | chr1_269977345_269977444 | 0.17 | 118 | 0.05 | 2.3e-02 | 10.33 | 5.26e-25 | 0.51 | FALSE |