chr3:129,261,795-132,900,111

Trait: Parametrial fat weight

Best TWAS P=3.08e-11 · Best GWAS P=1.76e-11 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Dtd1 gene expression Dtd1 0.34 12 0.18 1.5e-19 5.35 8.87e-08 0.45 FALSE
Adipose Dzank1 gene expression Dzank1 0.1 1802 0.04 3.6e-05 -5.47 4.54e-08 0.8 FALSE
Adipose Rbbp9 gene expression Rbbp9 0.11 1820 0.03 2.1e-04 5.43 5.55e-08 0.65 FALSE
Adipose Kif16b isoform ratio XM_006235108.4 0.07 2158 0.03 1.7e-04 5.65 1.59e-08 0.17 FALSE
Adipose Dstn mRNA stability Dstn 0.8 253 0.61 1.5e-84 -5.55 2.90e-08 0.06 FALSE
Adipose LOC120101717 mRNA stability LOC120101717 0.05 2365 0.01 9.9e-03 5.4 6.54e-08 0.35 TRUE
BLA Kif16b gene expression Kif16b 0.05 2131 0.02 1.9e-02 6.11 1.02e-09 0.42 FALSE
BLA Otor gene expression Otor 0.06 1963 0.01 1.2e-01 -6.06 1.32e-09 0.24 TRUE
BLA Scp2d1 gene expression Scp2d1 0.26 1 0.13 2.1e-07 5.29 1.24e-07 0.8 FALSE
BLA Snrpb2 gene expression Snrpb2 0.06 1954 0.01 5.2e-02 6.35 2.13e-10 0.43 FALSE
BLA Snrpb2 isoform ratio XM_039105470.1 0.09 7 0.07 1.2e-04 -5.66 1.54e-08 0.3 FALSE
BLA Rbbp9 intron excision ratio chr3_131927367_131929585 0.12 1 0.06 2.9e-04 -5.79 6.95e-09 0.14 FALSE
BLA Rbbp9 intron excision ratio chr3_131929308_131929585 0.11 1 0.06 4.1e-04 5.79 6.95e-09 0.11 FALSE
BLA Dstn mRNA stability Dstn 0.44 123 0.26 2.1e-14 -6.19 6.08e-10 0.49 FALSE
BLA Pcsk2 mRNA stability Pcsk2 0.27 1 0.09 1.5e-05 6.43 1.26e-10 0.48 FALSE
Brain Rrbp1 alternative TSS XM_039106605.1 0.02 1593 0.01 1.4e-02 6.15 7.87e-10 0.53 FALSE
Brain Rrbp1 alternative TSS XM_230637.10 0.02 1593 0.02 1.2e-02 -6.15 7.93e-10 0.53 FALSE
Brain Rrbp1 alternative TSS XM_039106605.1 0.03 1 0.02 3.5e-03 -6.6 4.02e-11 0.14 FALSE
Brain Rrbp1 alternative TSS XM_230637.10 0.03 1 0.03 1.7e-03 6.6 4.02e-11 0.22 FALSE
Brain Dtd1 gene expression Dtd1 0.2 149 0.19 1.3e-17 -5.39 6.88e-08 0.43 FALSE
Brain Dzank1 gene expression Dzank1 0.07 1 0.06 2.0e-06 5.37 7.69e-08 0.38 FALSE
Brain Kif16b gene expression Kif16b 0.15 93 0.1 7.0e-10 -5.26 1.43e-07 0.03 FALSE
Brain Otor gene expression Otor 0.1 1990 0.11 4.9e-10 -6.13 9.04e-10 0.36 FALSE
Brain Pcsk2 gene expression Pcsk2 0.38 38 0.46 1.0e-47 -5.77 7.82e-09 0.32 TRUE
Brain Rrbp1 gene expression Rrbp1 0.12 17 0.16 3.7e-15 -6.13 8.93e-10 0.25 TRUE
Brain Snrpb2 gene expression Snrpb2 0.08 50 0.08 3.2e-08 -5.87 4.24e-09 0.41 FALSE
Brain Zfp133 gene expression Zfp133 0.16 107 0.15 8.2e-14 5.26 1.45e-07 0.18 FALSE
Brain Dzank1 intron excision ratio chr3_131906549_131908083 0.04 1804 0.02 5.0e-03 5.59 2.30e-08 0.5 FALSE
Brain LOC120101719 intron excision ratio chr3_130525654_130567132 0.13 39 0.2 2.1e-18 6.48 9.00e-11 0.42 FALSE
Brain Snrpb2 intron excision ratio chr3_130399307_130400989 0.04 1981 0.04 2.9e-04 6.46 1.07e-10 0.44 FALSE
Brain Dstn mRNA stability Dstn 0.5 165 0.37 1.1e-35 -5.9 3.69e-09 0.07 FALSE
Eye Sec23b gene expression Sec23b 0.79 20 0.22 3.0e-04 5.79 6.90e-09 0.5 FALSE
IL LOC120101719 alternative polyA XR_005502514.1 0.24 74 0.27 4.2e-07 6.02 1.78e-09 0.41 FALSE
IL LOC120101719 alternative polyA XR_005502515.1 0.24 1 0.29 1.1e-07 -5.81 6.40e-09 0.04 FALSE
IL Rbbp9 alternative polyA NM_019219.3 0.3 1822 0.14 3.7e-04 -5.29 1.25e-07 0.61 FALSE
IL Rbbp9 alternative polyA NM_019219.3 0.34 31 0.14 2.6e-04 -5.59 2.22e-08 0.68 FALSE
IL Rbbp9 alternative polyA XM_039104445.1 0.34 42 0.14 2.6e-04 5.65 1.64e-08 0.69 FALSE
IL LOC120101719 gene expression LOC120101719 0.19 1 0.08 5.1e-03 -5.77 7.72e-09 0.05 FALSE
IL Pcsk2 gene expression Pcsk2 0.5 1455 0.15 2.4e-04 6 1.95e-09 0.33 FALSE
IL LOC120101719 isoform ratio XR_005502514.1 0.26 1 0.34 5.5e-09 5.81 6.40e-09 0.04 FALSE
IL LOC120101719 isoform ratio XR_005502515.1 0.26 1 0.34 5.4e-09 -5.81 6.40e-09 0.04 FALSE
IL Rbbp9 isoform ratio XM_039104444.1 0.24 22 0.08 6.1e-03 5.99 2.05e-09 0.59 FALSE
IL LOC120101719 intron excision ratio chr3_130525654_130567132 0.32 1 0.13 5.8e-04 6.2 5.61e-10 0.05 FALSE
IL Dstn mRNA stability Dstn 0.58 237 0.36 1.8e-09 -6.13 8.73e-10 0.5 FALSE
LHb Otor gene expression Otor 0.24 1990 0.01 1.8e-01 -6.17 6.76e-10 0.26 FALSE
LHb Rrbp1 gene expression Rrbp1 0.24 1593 0.13 6.3e-04 -5.96 2.53e-09 0.5 FALSE
LHb Snrpb2 gene expression Snrpb2 0.3 1981 0.14 3.6e-04 5.94 2.78e-09 0.3 FALSE
LHb Zfp133 gene expression Zfp133 0.24 26 0.06 2.0e-02 -5.22 1.78e-07 0.34 FALSE
LHb Sec23b intron excision ratio chr3_131955920_131958981 0.39 35 0.2 1.8e-05 5.31 1.08e-07 0.48 FALSE
LHb Dstn mRNA stability Dstn 0.33 1573 0.24 1.9e-06 6.12 9.30e-10 0.44 FALSE
Liver Kif16b alternative polyA XM_039105041.1 0.16 2158 0.13 6.2e-14 6.38 1.77e-10 0.47 FALSE
Liver Kif16b alternative polyA XM_039105043.1 0.11 2158 0.06 4.2e-07 -6.17 6.88e-10 0.48 FALSE
Liver Dtd1 gene expression Dtd1 0.21 1829 0.11 8.4e-12 5.29 1.24e-07 0.5 FALSE
Liver Kif16b gene expression Kif16b 0.24 83 0.2 1.4e-21 6.33 2.46e-10 0.59 FALSE
Liver LOC120101717 gene expression LOC120101717 0.05 2365 0.01 1.9e-02 -5.81 6.17e-09 0.21 FALSE
Liver Kif16b isoform ratio NM_001107783.2 0.03 1 0.03 2.2e-04 5.92 3.26e-09 0.03 FALSE
Liver Kif16b isoform ratio XM_039105043.1 0.03 2158 0.01 1.6e-02 -6.21 5.39e-10 0.38 FALSE
Liver Rbbp9 intron excision ratio chr3_131927367_131929585 0.3 98 0.21 7.7e-23 -5.27 1.39e-07 0.37 FALSE
Liver Rbbp9 intron excision ratio chr3_131929308_131929585 0.3 8 0.21 1.2e-22 -5.26 1.46e-07 0.39 FALSE
Liver Snrpb2 intron excision ratio chr3_130399307_130400989 0.04 1 0.04 3.1e-05 -6.22 4.89e-10 0.07 FALSE
Liver Snrpb2 intron excision ratio chr3_130399832_130400989 0.05 1 0.05 4.2e-06 6.22 4.89e-10 0.13 FALSE
Liver Dstn mRNA stability Dstn 0.63 1572 0.39 8.2e-46 5.54 3.01e-08 0.09 FALSE
Liver Rbbp9 mRNA stability Rbbp9 0.15 1820 0.12 4.7e-13 5.43 5.64e-08 0.63 FALSE
NAcc Kif16b alternative polyA XM_039105041.1 0.06 2158 0.04 5.5e-06 5.92 3.32e-09 0.43 FALSE
NAcc LOC120101719 alternative polyA XR_005502514.1 0.11 1 0.15 1.4e-16 6.47 1.01e-10 0.53 FALSE
NAcc LOC102550304 gene expression LOC102550304 0.18 7 0.25 7.8e-29 5.24 1.56e-07 0.01 TRUE
NAcc Otor gene expression Otor 0.03 1 0.04 9.3e-06 6.15 7.78e-10 0.08 FALSE
NAcc Pcsk2 gene expression Pcsk2 0.09 1455 0.12 1.6e-13 6.44 1.16e-10 0.45 FALSE
NAcc Rrbp1 gene expression Rrbp1 0.07 1 0.07 8.1e-09 5.72 1.06e-08 0.04 FALSE
NAcc Snrpb2 gene expression Snrpb2 0.04 1981 0.03 1.2e-04 6.23 4.69e-10 0.37 FALSE
NAcc Zfp133 gene expression Zfp133 0.09 6 0.09 1.6e-10 -5.24 1.59e-07 0.23 FALSE
NAcc Kif16b isoform ratio XM_006235108.4 0.02 2158 0.02 1.9e-03 5.96 2.58e-09 0.35 FALSE
NAcc LOC120101719 isoform ratio XR_005502514.1 0.12 1 0.13 3.4e-15 6.47 1.01e-10 0.53 FALSE
NAcc Snrpb2 intron excision ratio chr3_130399307_130400989 0.08 1981 0.07 2.0e-08 6.07 1.25e-09 0.37 FALSE
NAcc Snrpb2 intron excision ratio chr3_130399832_130400989 0.08 1981 0.09 1.6e-10 -6.6 4.14e-11 0.52 FALSE
NAcc Dstn mRNA stability Dstn 0.28 1 0.32 2.1e-38 -5.77 8.13e-09 0.03 FALSE
OFC LOC120101719 alternative polyA XR_005502514.1 0.35 43 0.3 7.6e-08 5.6 2.10e-08 0.4 FALSE
OFC LOC120101719 alternative polyA XR_005502515.1 0.35 86 0.29 1.6e-07 -5.67 1.43e-08 0.4 FALSE
OFC LOC120101719 gene expression LOC120101719 0.18 1 0.22 7.2e-06 -6.14 8.34e-10 0.05 FALSE
OFC Pcsk2 gene expression Pcsk2 0.56 1 0.36 1.7e-09 -5.81 6.40e-09 0.03 FALSE
OFC LOC120101719 isoform ratio XR_005502514.1 0.38 1 0.26 5.6e-07 6.27 3.60e-10 0.12 FALSE
OFC LOC120101719 intron excision ratio chr3_130525654_130567132 0.13 10 0.14 2.9e-04 5.29 1.23e-07 0.3 FALSE
OFC LOC120101719 intron excision ratio chr3_130529471_130567132 0.14 10 0.15 2.4e-04 -5.26 1.47e-07 0.31 FALSE
OFC Dstn mRNA stability Dstn 0.32 309 0.21 1.3e-05 -6.19 5.92e-10 0.53 FALSE
PL Kif16b alternative polyA XM_039105041.1 0.03 2158 0.03 3.3e-04 6.24 4.49e-10 0.43 FALSE
PL LOC120101719 alternative polyA XR_005502514.1 0.3 1 0.35 2.0e-39 6.25 4.17e-10 0.22 FALSE
PL LOC120101719 alternative polyA XR_005502515.1 0.34 1 0.37 4.9e-42 -6.38 1.79e-10 0.39 FALSE
PL Otor gene expression Otor 0.04 1 0.06 5.0e-07 6.46 1.03e-10 0.49 FALSE
PL Pcsk2 gene expression Pcsk2 0.09 1455 0.15 2.6e-16 6.18 6.59e-10 0.3 FALSE
PL Snrpb2 gene expression Snrpb2 0.1 1 0.1 2.1e-11 -6.43 1.26e-10 0.48 FALSE
PL Zfp133 gene expression Zfp133 0.14 1 0.14 1.6e-15 5.41 6.28e-08 0.34 TRUE
PL LOC120101719 isoform ratio XR_005502514.1 0.43 25 0.41 5.9e-48 5.93 3.05e-09 0.49 FALSE
PL Snrpb2 isoform ratio NM_001108592.3 0.05 1 0.06 2.3e-07 -6.5 8.18e-11 0.58 FALSE
PL Snrpb2 isoform ratio XM_039105470.1 0.04 1981 0.05 2.3e-06 -5.82 5.74e-09 0.47 FALSE
PL LOC120101719 intron excision ratio chr3_130525654_130567132 0.26 1 0.4 3.9e-47 6.51 7.55e-11 0.6 FALSE
PL LOC120101719 intron excision ratio chr3_130529471_130567132 0.13 1 0.22 1.2e-23 -6.38 1.79e-10 0.39 FALSE
PL Sec23b intron excision ratio chr3_131955920_131958981 0.09 76 0.1 5.0e-11 -5.67 1.40e-08 0.37 FALSE
PL Snrpb2 intron excision ratio chr3_130399307_130400989 0.06 1 0.05 2.4e-06 -6.18 6.40e-10 0.15 FALSE
PL Snrpb2 intron excision ratio chr3_130399832_130400989 0.06 1981 0.06 2.7e-07 -6.28 3.36e-10 0.44 FALSE
PL Dstn mRNA stability Dstn 0.54 137 0.41 4.7e-48 -5.65 1.61e-08 0.08 FALSE
PL Pcsk2 mRNA stability Pcsk2 0.04 1 0.03 1.1e-04 6.6 4.02e-11 0.66 FALSE
PL Snrpb2 mRNA stability Snrpb2 0.02 1981 0.03 2.1e-04 5.93 3.09e-09 0.38 FALSE
pVTA Smim26 alternative polyA NM_001106520.1 0.18 15 0.14 1.4e-06 -5.3 1.17e-07 0.38 FALSE
pVTA Smim26 alternative polyA XM_006235125.4 0.17 15 0.12 7.7e-06 5.37 7.68e-08 0.4 FALSE
pVTA Dtd1 gene expression Dtd1 0.2 15 0.19 1.7e-08 -5.32 1.06e-07 0.31 FALSE
pVTA Otor gene expression Otor 0.11 1 0.13 3.8e-06 6.64 3.08e-11 0.52 TRUE
pVTA Pcsk2 gene expression Pcsk2 0.46 29 0.38 2.6e-17 6.41 1.50e-10 0.51 FALSE
pVTA Rrbp1 gene expression Rrbp1 0.32 1 0.17 8.4e-08 5.87 4.48e-09 0.08 FALSE
pVTA Sec23b gene expression Sec23b 0.78 339 0.74 3.2e-46 -5.27 1.40e-07 0.28 FALSE
pVTA Snrpb2 gene expression Snrpb2 0.07 1954 0.06 1.9e-03 6.45 1.13e-10 0.4 FALSE
pVTA Rrbp1 intron excision ratio chr3_131351451_131353366 0.1 94 0.06 1.5e-03 -5.84 5.32e-09 0.63 FALSE
pVTA Dstn mRNA stability Dstn 0.1 1 0.09 9.1e-05 -6.04 1.51e-09 0.06 FALSE
pVTA Pcsk2 mRNA stability Pcsk2 0.11 1 0.15 5.3e-07 6.22 5.04e-10 0.2 FALSE
pVTA Sec23b mRNA stability Sec23b 0.38 28 0.4 1.1e-18 5.57 2.53e-08 0.41 FALSE
RMTg Snrpb2 alternative TSS XM_039105470.1 0.11 1 0.08 3.2e-03 6.18 6.40e-10 0.05 FALSE
RMTg Otor gene expression Otor 0.1 1990 0.06 1.3e-02 -6.31 2.85e-10 0.3 FALSE
RMTg Rrbp1 gene expression Rrbp1 0.28 1 0.26 1.4e-07 5.66 1.47e-08 0.04 FALSE
RMTg Rbbp9 isoform ratio NM_019219.3 0.18 1822 0.11 8.3e-04 -5.41 6.28e-08 0.49 FALSE
RMTg Sec23b intron excision ratio chr3_131955920_131958402 0.18 1822 0.04 3.0e-02 -5.28 1.31e-07 0.38 FALSE
RMTg Sec23b intron excision ratio chr3_131958477_131958981 0.16 1822 0.06 9.5e-03 -5.46 4.65e-08 0.32 FALSE
RMTg Dstn mRNA stability Dstn 0.1 1573 0.06 8.3e-03 6.1 1.04e-09 0.33 FALSE