chr3:129,554,891-132,693,612

Trait: Parametrial fat weight

Best TWAS P=4.83e-11 · Best GWAS P=1.76e-11 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Dstn gene expression ENSRNOG00000005924 0.59 1575 0.48 3.4e-60 5.63 1.77e-08 0.08 FALSE
Adipose Dtd1 gene expression ENSRNOG00000008746 0.28 19 0.15 5.0e-16 5.44 5.47e-08 0.52 FALSE
Adipose Snrpb2 mRNA stability ENSRNOG00000004967 0.04 20 0.01 1.5e-02 -5.92 3.14e-09 0.37 FALSE
Adipose Dstn mRNA stability ENSRNOG00000005924 0.83 184 0.6 1.1e-83 5.45 4.93e-08 0.06 TRUE
Adipose Sec23b mRNA stability ENSRNOG00000008411 0.08 1 0.06 5.6e-07 5.17 2.35e-07 0.18 FALSE
BLA Kif16b gene expression ENSRNOG00000004951 0.04 1 0.04 4.1e-03 6.42 1.36e-10 0.04 FALSE
BLA Snrpb2 gene expression ENSRNOG00000004967 0.05 1 0.02 4.4e-02 6.44 1.16e-10 0.04 FALSE
BLA Pcsk2 gene expression ENSRNOG00000005438 0.11 1 0.07 1.9e-04 5.75 8.67e-09 0.04 FALSE
BLA Dstn gene expression ENSRNOG00000005924 0.84 268 0.64 9.8e-44 6.04 1.58e-09 0.27 FALSE
BLA Dtd1 gene expression ENSRNOG00000008746 0.25 2 0.16 4.4e-09 5.41 6.17e-08 0.4 TRUE
BLA Otor gene expression ENSRNOG00000028721 0.07 1960 0.04 2.7e-03 -5.94 2.93e-09 0.25 TRUE
BLA Rbbp9 intron excision ratio chr3:131927367:131929585 0.14 1 0.07 8.2e-05 5.87 4.24e-09 0.61 FALSE
BLA Rbbp9 intron excision ratio chr3:131929308:131929585 0.13 1 0.07 7.7e-05 -5.87 4.24e-09 0.51 FALSE
BLA Pcsk2 mRNA stability ENSRNOG00000005438 0.23 1 0.15 3.1e-08 -6.43 1.26e-10 0.55 FALSE
BLA Dstn mRNA stability ENSRNOG00000005924 0.45 182 0.39 2.2e-22 6.32 2.63e-10 0.6 FALSE
BLA Kat14 mRNA stability ENSRNOG00000007160 0.05 4 0.03 9.8e-03 -5.29 1.25e-07 0.15 FALSE
Brain Rrbp1 alternative TSS ENSRNOT00000055602 0.03 1597 0.03 2.1e-03 -5.73 9.81e-09 0.42 FALSE
Brain Rrbp1 alternative TSS ENSRNOT00000101060 0.03 1597 0.02 2.7e-03 5.79 7.23e-09 0.4 FALSE
Brain Snrpb2 gene expression ENSRNOG00000004967 0.06 1963 0.05 1.0e-05 5.49 4.03e-08 0.4 FALSE
Brain Pcsk2 gene expression ENSRNOG00000005438 0.38 1 0.44 3.9e-44 5.83 5.41e-09 0.04 FALSE
Brain Dstn gene expression ENSRNOG00000005924 0.72 189 0.8 3.2e-120 5.92 3.18e-09 0.06 FALSE
Brain Rrbp1 gene expression ENSRNOG00000005958 0.14 1597 0.16 4.1e-15 -5.99 2.10e-09 0.34 FALSE
Brain Sec23b gene expression ENSRNOG00000008411 0.78 128 0.8 7.8e-119 5.12 3.02e-07 0.02 FALSE
Brain Zfp133 gene expression ENSRNOG00000027955 0.17 1 0.16 2.7e-14 -5.2 1.94e-07 0.15 FALSE
Brain Otor gene expression ENSRNOG00000028721 0.1 25 0.11 5.1e-10 -5.33 9.58e-08 0.35 FALSE
Brain Snrpb2 intron excision ratio chr3:130399307:130400989 0.03 1 0.03 5.7e-04 6.36 2.02e-10 0.04 FALSE
Brain Sec23b intron excision ratio chr3:131955920:131958981 0.3 118 0.22 3.0e-20 5.18 2.22e-07 0.09 FALSE
Brain Snrpb2 mRNA stability ENSRNOG00000004967 0.03 1963 0.01 1.3e-02 5.38 7.54e-08 0.31 FALSE
Brain Dstn mRNA stability ENSRNOG00000005924 0.71 239 0.52 1.2e-56 5.9 3.69e-09 0.06 FALSE
Brain Smim26 mRNA stability ENSRNOG00000036971 0.03 1 0.02 2.7e-03 5.12 3.06e-07 0.04 FALSE
Eye Dstn gene expression ENSRNOG00000005924 0.77 1048 0.25 1.1e-04 6.01 1.82e-09 0.37 FALSE
Eye Sec23b gene expression ENSRNOG00000008411 0.81 19 0.29 2.1e-05 5.71 1.15e-08 0.6 FALSE
Eye Zfp133 intron excision ratio chr3:131829590:131840865 0.3 1 0.04 9.9e-02 -5.96 2.54e-09 0.06 FALSE
IL Pcsk2 gene expression ENSRNOG00000005438 0.49 1 0.21 7.5e-06 6.34 2.36e-10 0.08 FALSE
IL Dstn gene expression ENSRNOG00000005924 0.79 1574 0.39 2.0e-10 6.21 5.22e-10 0.51 FALSE
IL ENSRNOG00000067833 gene expression ENSRNOG00000067833 0.33 9 0.13 5.9e-04 5.33 9.97e-08 0.08 FALSE
IL Dstn mRNA stability ENSRNOG00000005924 0.54 1574 0.34 4.2e-09 5.94 2.93e-09 0.47 FALSE
LHb Snrpb2 gene expression ENSRNOG00000004967 0.24 1 0.15 2.3e-04 6.29 3.23e-10 0.05 FALSE
LHb Dstn gene expression ENSRNOG00000005924 0.8 8 0.5 1.3e-13 6.19 6.06e-10 0.36 FALSE
LHb Rrbp1 gene expression ENSRNOG00000005958 0.22 1 0.21 1.0e-05 -6.35 2.20e-10 0.07 FALSE
LHb Dzank1 gene expression ENSRNOG00000007440 0.14 1804 0.04 4.6e-02 -5.72 1.09e-08 0.4 FALSE
LHb Otor gene expression ENSRNOG00000028721 0.26 5 0.01 1.7e-01 -6.07 1.30e-09 0.22 FALSE
LHb Kif16b mRNA stability ENSRNOG00000004951 0.11 6 0.03 7.3e-02 -5.88 4.21e-09 0.34 FALSE
LHb Dstn mRNA stability ENSRNOG00000005924 0.39 1 0.37 8.7e-10 5.79 7.00e-09 0.04 FALSE
Liver Kif16b alternative polyA ENSRNOT00000036273 0.18 1 0.14 6.7e-15 -6.32 2.55e-10 0.38 FALSE
Liver Kif16b alternative polyA ENSRNOT00000118037 0.18 1 0.14 1.3e-15 6.31 2.76e-10 0.36 FALSE
Liver Kif16b gene expression ENSRNOG00000004951 0.21 12 0.18 3.7e-19 -6.31 2.83e-10 0.58 FALSE
Liver Dstn gene expression ENSRNOG00000005924 0.67 1575 0.53 2.6e-69 5.86 4.60e-09 0.15 FALSE
Liver Kat14 gene expression ENSRNOG00000007160 0.05 37 0.04 3.9e-05 -5.41 6.38e-08 0.03 FALSE
Liver Rbbp9 gene expression ENSRNOG00000007972 0.12 9 0.08 2.9e-09 5.23 1.74e-07 0.29 FALSE
Liver Sec23b gene expression ENSRNOG00000008411 0.09 1824 0.05 5.2e-06 5.33 1.01e-07 0.67 FALSE
Liver Dtd1 gene expression ENSRNOG00000008746 0.2 1829 0.09 1.2e-10 5.3 1.15e-07 0.49 FALSE
Liver Kif16b isoform ratio ENSRNOT00000083061 0.06 1 0.04 4.7e-05 -6.27 3.65e-10 0.15 FALSE
Liver Kif16b isoform ratio ENSRNOT00000118037 0.15 2140 0.13 4.0e-14 6.47 9.50e-11 0.48 FALSE
Liver Mgme1 isoform ratio ENSRNOT00000038865 0.03 1 0.02 4.0e-03 -5.36 8.47e-08 0.03 FALSE
Liver Mgme1 isoform ratio ENSRNOT00000098696 0.03 1 0.02 3.2e-03 5.36 8.47e-08 0.03 FALSE
Liver Kif16b intron excision ratio chr3:129976371:129996958 0.03 2140 0.01 2.4e-02 -5.22 1.78e-07 0.09 FALSE
Liver Snrpb2 intron excision ratio chr3:130399307:130400989 0.04 1 0.03 3.5e-04 6.23 4.71e-10 0.07 FALSE
Liver Snrpb2 intron excision ratio chr3:130399832:130400989 0.06 1963 0.03 2.4e-04 -6.46 1.08e-10 0.47 FALSE
Liver Rbbp9 intron excision ratio chr3:131927367:131929585 0.29 91 0.21 2.3e-22 5.2 1.96e-07 0.37 FALSE
Liver Rbbp9 intron excision ratio chr3:131929308:131929585 0.29 25 0.2 9.7e-22 -5.18 2.17e-07 0.38 FALSE
Liver Dstn mRNA stability ENSRNOG00000005924 0.67 1575 0.5 1.1e-63 5.7 1.22e-08 0.1 FALSE
Liver Rbbp9 mRNA stability ENSRNOG00000007972 0.04 1818 0.01 8.2e-03 5.66 1.49e-08 0.62 FALSE
NAcc Snrpb2 gene expression ENSRNOG00000004967 0.04 1 0.02 1.4e-02 5.8 6.46e-09 0.03 FALSE
NAcc Pcsk2 gene expression ENSRNOG00000005438 0.25 6 0.15 3.4e-11 5.72 1.07e-08 0.32 FALSE
NAcc Dstn gene expression ENSRNOG00000005924 0.84 1 0.7 1.4e-71 6.04 1.51e-09 0.15 FALSE
NAcc Rrbp1 gene expression ENSRNOG00000005958 0.11 1 0.11 2.0e-08 -5.89 3.96e-09 0.09 FALSE
NAcc Otor gene expression ENSRNOG00000028721 0.04 1 0.01 5.2e-02 -6.15 7.78e-10 0.03 FALSE
NAcc Rbbp9 intron excision ratio chr3:131927367:131929585 0.17 1 0.08 7.7e-07 5.12 3.06e-07 0.13 FALSE
NAcc Rbbp9 intron excision ratio chr3:131929308:131929585 0.17 79 0.08 1.7e-06 -5.17 2.29e-07 0.4 FALSE
NAcc Kif16b mRNA stability ENSRNOG00000004951 0.04 27 0.01 5.8e-02 -6.5 7.77e-11 0.47 TRUE
NAcc Dstn mRNA stability ENSRNOG00000005924 0.55 212 0.48 1.3e-39 5.94 2.85e-09 0.14 FALSE
OFC Pcsk2 gene expression ENSRNOG00000005438 0.62 9 0.38 5.0e-10 5.18 2.20e-07 0.29 TRUE
OFC Dstn gene expression ENSRNOG00000005924 0.82 41 0.52 1.4e-14 5.94 2.86e-09 0.43 FALSE
OFC Dstn mRNA stability ENSRNOG00000005924 0.29 1574 0.19 3.1e-05 6.18 6.52e-10 0.48 FALSE
PL Snrpb2 gene expression ENSRNOG00000004967 0.12 9 0.11 1.3e-08 6.31 2.82e-10 0.41 FALSE
PL Pcsk2 gene expression ENSRNOG00000005438 0.15 80 0.18 1.0e-13 6.38 1.76e-10 0.47 FALSE
PL Dstn gene expression ENSRNOG00000005924 0.88 165 0.62 4.1e-59 5.84 5.31e-09 0.07 FALSE
PL Dtd1 gene expression ENSRNOG00000008746 0.16 1 0.16 3.3e-12 5.12 3.12e-07 0.29 FALSE
PL Zfp133 gene expression ENSRNOG00000027955 0.19 1 0.12 1.3e-09 -5.2 2.01e-07 0.14 FALSE
PL Otor gene expression ENSRNOG00000028721 0.06 1972 0.05 1.0e-04 -6.22 4.99e-10 0.43 FALSE
PL Snrpb2 intron excision ratio chr3:130399307:130400989 0.05 1963 0.03 2.9e-03 6.57 5.17e-11 0.44 FALSE
PL Sec23b intron excision ratio chr3:131955920:131958981 0.07 69 0.05 1.2e-04 5.41 6.24e-08 0.35 FALSE
PL Snrpb2 mRNA stability ENSRNOG00000004967 0.09 41 0.03 1.4e-03 5.62 1.87e-08 0.19 FALSE
PL Pcsk2 mRNA stability ENSRNOG00000005438 0.04 1 0.02 5.4e-03 -6.58 4.83e-11 0.04 TRUE
PL Dstn mRNA stability ENSRNOG00000005924 0.7 52 0.49 6.1e-42 5.7 1.22e-08 0.06 FALSE