chr6:25,869,940-29,090,273

Trait: Parametrial fat weight

Best TWAS P=1.53e-10 · Best GWAS P=5.24e-09 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Ncoa1 alternative polyA ENSRNOT00000105343 0.04 576 0.01 3.6e-02 -5.73 1.03e-08 0.35 TRUE
Adipose Ncoa1 alternative polyA ENSRNOT00000110405 0.04 6 0.01 1.5e-02 6.13 8.61e-10 0.38 FALSE
Adipose Dnajc27 gene expression ENSRNOG00000003988 0.59 90 0.35 1.1e-39 5.26 1.47e-07 0.32 FALSE
Adipose Adcy3 gene expression ENSRNOG00000003999 0.39 1 0.12 1.2e-13 -5.61 2.03e-08 0.81 FALSE
Adipose Klhl29 gene expression ENSRNOG00000005371 0.13 21 0.04 1.1e-05 -5.13 2.84e-07 0.81 FALSE
Adipose ENSRNOG00000066171 isoform ratio ENSRNOT00000114599 0.09 1 0.05 3.2e-06 -5.58 2.39e-08 0.73 FALSE
BLA Efr3b gene expression ENSRNOG00000012950 0.17 8 0.13 1.2e-07 -5.22 1.83e-07 0.41 FALSE
BLA Ubxn2a intron excision ratio chr6:27893322:27894997 0.04 11 0.03 1.2e-02 5.55 2.89e-08 0.44 FALSE
BLA Efr3b mRNA stability ENSRNOG00000012950 0.15 1188 0.13 1.2e-07 -5.1 3.33e-07 0.34 FALSE
Brain Dnajc27 gene expression ENSRNOG00000003988 0.03 1155 0.03 1.0e-03 5.31 1.09e-07 0.45 FALSE
Brain Ncoa1 gene expression ENSRNOG00000004068 0.19 4 0.14 5.5e-13 5.33 9.78e-08 0.78 FALSE
Brain Efr3b gene expression ENSRNOG00000012950 0.19 1 0.14 1.0e-12 -5.57 2.48e-08 0.81 FALSE
Brain ENSRNOG00000066171 isoform ratio ENSRNOT00000099733 0.05 32 0.03 2.1e-03 -6.4 1.53e-10 0.66 TRUE
Brain ENSRNOG00000066171 intron excision ratio chr6:27482426:27483205 0.02 1 0.03 2.0e-03 -5.19 2.09e-07 0.03 FALSE
Brain Efr3b mRNA stability ENSRNOG00000012950 0.2 27 0.15 4.7e-14 -5.34 9.29e-08 0.53 FALSE
Eye Efr3b alternative TSS ENSRNOT00000068214 0.32 1 0.09 1.8e-02 -5.17 2.28e-07 0.06 FALSE
IL Efr3b gene expression ENSRNOG00000012950 0.47 1 0.33 1.1e-08 -5.22 1.76e-07 0.31 FALSE
IL Efr3b mRNA stability ENSRNOG00000012950 0.21 8 0.22 6.2e-06 -5.29 1.22e-07 0.45 TRUE
LHb Dtnb isoform ratio ENSRNOT00000060810 0.19 1 0.13 6.0e-04 -5.22 1.78e-07 0.07 FALSE
LHb Dtnb isoform ratio ENSRNOT00000094568 0.47 1 0.08 5.0e-03 5.22 1.78e-07 0.06 FALSE
LHb ENSRNOG00000066171 isoform ratio ENSRNOT00000099733 0.13 1 0.11 1.8e-03 -5.52 3.44e-08 0.06 FALSE
LHb Efr3b mRNA stability ENSRNOG00000012950 0.12 1187 0.1 2.6e-03 -5.3 1.15e-07 0.42 FALSE
Liver Ncoa1 alternative polyA ENSRNOT00000068531 0.05 1 0.01 1.2e-02 5.39 6.88e-08 0.03 FALSE
Liver Fam228b alternative polyA ENSRNOT00000113530 0.04 1 0.03 8.2e-04 5.68 1.37e-08 0.07 FALSE
Liver Fam228b alternative polyA ENSRNOT00000114842 0.04 1 0.03 3.0e-04 -5.68 1.37e-08 0.31 FALSE
Liver Adcy3 gene expression ENSRNOG00000003999 0.29 1 0.14 2.3e-15 -5.53 3.19e-08 0.73 FALSE
Liver Ncoa1 gene expression ENSRNOG00000004068 0.06 576 0.02 3.2e-03 -5.89 3.75e-09 0.64 FALSE
Liver Fam228b gene expression ENSRNOG00000049615 0.19 1 0.11 1.8e-12 -5.8 6.74e-09 0.94 FALSE
Liver Ncoa1 isoform ratio ENSRNOT00000068531 0.04 1 0.04 8.5e-05 5.48 4.28e-08 0.2 FALSE
Liver Ncoa1 isoform ratio ENSRNOT00000110405 0.02 1 0.02 4.2e-03 -5.48 4.28e-08 0.03 FALSE
Liver Cenpo mRNA stability ENSRNOG00000050111 0.27 1 0.02 3.9e-03 5.8 6.74e-09 0.06 FALSE
NAcc Dnajc27 gene expression ENSRNOG00000003988 0.08 1154 0.11 2.7e-08 5.23 1.68e-07 0.36 FALSE
NAcc Efr3b gene expression ENSRNOG00000012950 0.19 1187 0.2 5.3e-15 -5.25 1.54e-07 0.45 FALSE
NAcc ENSRNOG00000066171 isoform ratio ENSRNOT00000099733 0.06 482 0.02 1.2e-02 -5.76 8.65e-09 0.49 FALSE
OFC Ncoa1 alternative polyA ENSRNOT00000068531 0.13 576 0.08 5.3e-03 5.4 6.66e-08 0.41 FALSE
OFC Ncoa1 alternative polyA ENSRNOT00000110405 0.13 576 0.07 7.8e-03 -5.65 1.58e-08 0.42 FALSE
OFC Itsn2 intron excision ratio chr6:27617212:27638176 0.24 3 0.12 9.0e-04 5.51 3.53e-08 0.43 TRUE
PL Dnajc27 gene expression ENSRNOG00000003988 0.18 1154 0.04 6.1e-04 5.17 2.40e-07 0.64 FALSE
PL Adcy3 gene expression ENSRNOG00000003999 0.05 1 0.03 3.4e-03 -5.41 6.40e-08 0.04 FALSE
PL Efr3b gene expression ENSRNOG00000012950 0.47 64 0.42 7.2e-34 -5.27 1.34e-07 0.45 FALSE
PL Itsn2 gene expression ENSRNOG00000046741 0.02 1 0.03 4.6e-03 5.53 3.27e-08 0.07 FALSE
PL Ncoa1 intron excision ratio chr6:27234917:27235003 0.04 1 0.02 2.2e-02 -5.57 2.48e-08 0.05 FALSE
PL Efr3b mRNA stability ENSRNOG00000012950 0.2 8 0.26 1.6e-19 -5.16 2.42e-07 0.53 FALSE