Hub : Traits : Length with tail : ← : →

chr3:135,692,334-138,270,891

Trait: Length with tail

Best TWAS P = 6.77e-10 · Best GWAS P= 3.40e-08 conditioned to 1.00e+00

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Mertk	alternative polyA	NM_022943.1	0.04	30	0.02	1.5e-03	5.41	6.27e-08	0.35	FALSE
Adipose	Mertk	alternative polyA	XM_063284527.1	0.04	42	0.02	1.1e-03	-5.38	7.56e-08	0.35	FALSE
Adipose	Pced1a	alternative polyA	NM_001399286.1	0.05	1479	0.03	3.0e-04	5.29	1.19e-07	0.45	FALSE
Adipose	Zc3h8	alternative TSS	XM_063283755.1	0.05	2243	0.03	7.3e-04	-5.29	1.20e-07	0.43	FALSE
Adipose	Zc3h8	alternative TSS	XM_063283755.1	0.04	2243	0.02	5.5e-03	-5.23	1.70e-07	0.4	FALSE
Adipose	LOC129351010	gene expression	LOC129351010	0.04	1529	0.02	1.5e-03	5.28	1.33e-07	0.4	FALSE
Adipose	Mrps26	gene expression	Mrps26	0.04	1	0.02	2.3e-03	-5.25	1.54e-07	0.03	FALSE
Adipose	Pced1a	gene expression	Pced1a	0.05	1479	0.03	1.0e-04	-5.28	1.28e-07	0.45	FALSE
Adipose	Ttl	gene expression	Ttl	0.31	156	0.21	2.5e-23	5.45	5.12e-08	0.62	FALSE
Adipose	Ubox5	gene expression	Ubox5	0.12	839	0.08	6.9e-09	-5.25	1.51e-07	0.55	FALSE
Adipose	Mertk	isoform ratio	NM_022943.1	0.03	1	0.01	8.3e-03	5.35	8.60e-08	0.04	FALSE
Adipose	Mertk	isoform ratio	XM_063284527.1	0.04	2143	0.02	6.3e-03	-5.39	7.12e-08	0.37	FALSE
Adipose	Zc3h8	isoform ratio	XM_063283755.1	0.06	1	0.03	2.3e-04	-5.44	5.18e-08	0.35	FALSE
Adipose	Fastkd5	intron excision ratio	chr3_138286180_138299471	0.03	1	0.01	6.2e-02	5.27	1.40e-07	0.03	FALSE
Adipose	Ubox5	intron excision ratio	chr3_138286180_138299471	0.03	1	0.01	6.2e-02	5.27	1.40e-07	0.03	FALSE
Adipose	Ubox5	mRNA stability	Ubox5	0.04	839	0.02	1.0e-03	-5.26	1.41e-07	0.51	FALSE
BLA	Zc3h6	alternative polyA	NM_001107772.1	0.73	2241	0.49	6.9e-29	-5.32	1.06e-07	0.42	FALSE
BLA	Zc3h6	alternative polyA	XM_008762235.4	0.76	439	0.49	1.7e-29	5.23	1.68e-07	0.42	FALSE
BLA	Zc3h6	alternative TSS	XM_008762235.4	0.11	103	0.05	1.2e-03	-5.24	1.58e-07	0.36	TRUE
BLA	Zc3h8	alternative TSS	XM_063283755.1	0.23	21	0.09	1.2e-05	-5.45	5.15e-08	0.47	FALSE
BLA	Zc3h8	alternative TSS	XM_063283754.1	0.22	138	0.09	1.1e-05	5.47	4.43e-08	0.47	FALSE
BLA	Zc3h8	alternative TSS	XM_063283755.1	0.24	241	0.1	7.5e-06	-5.47	4.53e-08	0.48	FALSE
BLA	Mrps26	gene expression	Mrps26	0.14	1	0.08	5.1e-05	-5.23	1.74e-07	0.06	FALSE
BLA	Vinac1	gene expression	Vinac1	0.28	101	0.23	3.0e-12	5.24	1.59e-07	0.54	FALSE
BLA	Zc3h6	isoform ratio	NM_001107772.1	0.18	2241	0.12	4.0e-07	-5.28	1.27e-07	0.46	FALSE
BLA	Zc3h8	isoform ratio	XM_063283755.1	0.21	159	0.09	1.4e-05	-5.33	1.00e-07	0.43	FALSE
BLA	Pced1a	intron excision ratio	chr3_138070549_138070844	0.05	1479	0.03	1.2e-02	-5.29	1.20e-07	0.3	FALSE
BLA	Ubox5	intron excision ratio	chr3_138265592_138268276	0.08	13	0.03	6.6e-03	5.26	1.41e-07	0.32	FALSE
BLA	Zc3h8	intron excision ratio	chr3_136643995_136645773	0.15	35	0.07	2.0e-04	-5.52	3.30e-08	0.46	FALSE
Brain	Pced1a	alternative polyA	XM_039104578.2	0.31	78	0.41	1.9e-40	5.29	1.20e-07	0.47	FALSE
Brain	Pced1a	alternative polyA	XM_006235015.4	0.09	1	0.11	3.0e-10	-5.23	1.66e-07	0.43	FALSE
Brain	Pced1a	alternative polyA	XM_039104578.2	0.31	37	0.41	1.0e-40	5.35	8.94e-08	0.48	FALSE
Brain	Pced1a	alternative TSS	NM_001399286.1	0.03	1	0.03	1.8e-03	-5.26	1.45e-07	0.04	FALSE
Brain	Pced1a	alternative TSS	NM_001399286.1	0.04	1479	0.04	1.1e-04	-5.22	1.79e-07	0.45	FALSE
Brain	Ebf4	gene expression	Ebf4	0.21	1683	0.18	2.1e-16	5.3	1.14e-07	0.46	FALSE
Brain	LOC134486151	gene expression	LOC134486151	0.03	1	0.03	1.4e-03	5.24	1.63e-07	0.04	FALSE
Brain	Ttl	gene expression	Ttl	0.07	121	0.03	1.9e-03	5.36	8.49e-08	0.55	FALSE
Brain	Ubox5	gene expression	Ubox5	0.13	839	0.12	4.1e-11	-5.27	1.40e-07	0.56	FALSE
Brain	Ubox5	intron excision ratio	chr3_138271085_138272928	0.75	57	0.79	3.2e-116	5.21	1.93e-07	0.49	FALSE
Brain	Ebf4	mRNA stability	Ebf4	0.2	16	0.19	7.1e-18	5.28	1.30e-07	0.46	FALSE
Eye	Ubox5	intron excision ratio	chr3_138271085_138272928	0.83	1	0.39	5.4e-07	5.22	1.81e-07	0.07	FALSE
IC	Ttl	alternative TSS	NM_138536.2	0.32	16	0.24	1.4e-10	-5.24	1.60e-07	0.51	FALSE
IC	Ttl	alternative TSS	XM_039104213.2	0.32	11	0.24	1.8e-10	5.25	1.55e-07	0.51	FALSE
IC	Fbln7	gene expression	Fbln7	0.29	2289	0.18	3.7e-08	-5.31	1.12e-07	0.42	FALSE
IC	LOC108350462	gene expression	LOC108350462	0.15	112	0.09	1.1e-04	5.27	1.40e-07	0.38	FALSE
IC	Pced1a	isoform ratio	XM_039104578.2	0.32	184	0.41	2.7e-18	5.33	9.56e-08	0.46	FALSE
IC	Ubox5	intron excision ratio	chr3_138271085_138272928	0.93	1	0.73	4.2e-43	5.23	1.73e-07	0.51	FALSE
IC	Ubox5	intron excision ratio	chr3_138271085_138272979	0.93	1	0.73	3.4e-43	-5.23	1.73e-07	0.51	FALSE
IL	Pced1a	alternative polyA	XM_039104578.2	0.55	1479	0.34	4.3e-09	5.22	1.78e-07	0.46	FALSE
IL	Zc3h6	alternative polyA	XM_008762235.4	0.78	15	0.44	4.7e-12	5.25	1.48e-07	0.4	FALSE
IL	Ubox5	gene expression	Ubox5	0.27	839	0.11	1.1e-03	-5.26	1.42e-07	0.44	FALSE
LHb	Fbln7	gene expression	Fbln7	0.42	2289	0.12	9.6e-04	-5.28	1.33e-07	0.39	FALSE
LHb	Mrps26	gene expression	Mrps26	0.23	1053	0.13	5.1e-04	-5.26	1.47e-07	0.43	FALSE
LHb	Tgm6	gene expression	Tgm6	0.22	339	0.14	4.0e-04	-6.17	6.77e-10	0.37	TRUE
LHb	Ttl	gene expression	Ttl	0.24	14	0.07	7.6e-03	-5.24	1.60e-07	0.3	FALSE
LHb	Ubox5	gene expression	Ubox5	0.25	839	0.11	1.3e-03	-5.25	1.55e-07	0.49	FALSE
Liver	Zc3h6	alternative polyA	NM_001107772.1	0.15	9	0.07	4.9e-08	-5.44	5.23e-08	0.41	TRUE
Liver	Zc3h6	alternative polyA	XM_008762235.4	0.14	11	0.07	6.2e-08	5.44	5.23e-08	0.41	FALSE
Liver	Ebf4	alternative TSS	XM_063284541.1	0.04	1	0.03	3.8e-04	5.31	1.10e-07	0.1	FALSE
Liver	Ebf4	gene expression	Ebf4	0.48	1	0.44	1.6e-53	-5.26	1.47e-07	0.44	FALSE
Liver	Fastkd5	gene expression	Fastkd5	0.03	839	0.01	2.6e-02	5.27	1.34e-07	0.32	FALSE
Liver	LOC108350462	gene expression	LOC108350462	0.09	32	0.07	1.5e-08	5.24	1.57e-07	0.42	TRUE
Liver	Pced1a	gene expression	Pced1a	0.22	1	0.19	3.6e-21	-5.33	9.85e-08	0.55	FALSE
Liver	Polr1b	gene expression	Polr1b	0.23	1	0.13	2.5e-14	5.5	3.88e-08	0.94	FALSE
Liver	Ptpra	gene expression	Ptpra	0.02	1376	0	8.6e-02	-5.23	1.74e-07	0.33	FALSE
Liver	Vps16	gene expression	Vps16	0.17	7	0.13	9.2e-15	-5.21	1.87e-07	0.45	FALSE
Liver	Ubox5	intron excision ratio	chr3_138271085_138272928	0.72	52	0.35	1.7e-40	5.24	1.61e-07	0.55	FALSE
Liver	Ubox5	intron excision ratio	chr3_138271085_138272979	0.72	48	0.35	2.3e-40	-5.24	1.61e-07	0.55	FALSE
Liver	Zc3h8	intron excision ratio	chr3_136643995_136645773	0.04	1	0.02	3.8e-03	-5.44	5.18e-08	0.07	FALSE
Liver	Ubox5	mRNA stability	Ubox5	0.12	839	0.07	6.4e-08	-5.23	1.68e-07	0.55	FALSE
NAcc	Pced1a	alternative polyA	XM_039104578.2	0.31	65	0.42	1.1e-68	5.28	1.32e-07	0.54	FALSE
NAcc	Pced1a	alternative polyA	XM_039104578.2	0.34	84	0.41	5.7e-67	5.28	1.27e-07	0.54	FALSE
NAcc	Sirpa	alternative TSS	NM_013016.3	0.03	1	0.03	7.9e-06	-5.28	1.31e-07	0.65	FALSE
NAcc	Sirpa	alternative TSS	NM_013016.3	0.02	1	0.02	1.8e-04	-5.28	1.31e-07	0.22	FALSE
NAcc	Ttl	alternative TSS	NM_138536.2	0.06	4	0.04	1.3e-06	-5.5	3.88e-08	0.56	FALSE
NAcc	Ttl	alternative TSS	XM_039104213.2	0.06	5	0.04	6.2e-07	5.5	3.74e-08	0.56	FALSE
NAcc	Ebf4	gene expression	Ebf4	0.07	4	0.05	1.9e-08	5.25	1.51e-07	0.42	FALSE
NAcc	Fbln7	gene expression	Fbln7	0.21	2289	0.21	6.2e-31	-5.23	1.71e-07	0.49	FALSE
NAcc	Ptpra	gene expression	Ptpra	0.04	1376	0.06	2.3e-09	-5.24	1.64e-07	0.48	FALSE
NAcc	Ubox5	gene expression	Ubox5	0.1	839	0.12	1.2e-17	-5.28	1.29e-07	0.55	FALSE
NAcc	Pced1a	isoform ratio	NM_001399285.1	0.01	1479	0.01	9.1e-03	5.23	1.69e-07	0.39	FALSE
NAcc	Pced1a	isoform ratio	XM_039104578.2	0.21	1	0.36	1.8e-56	5.28	1.31e-07	0.49	FALSE
NAcc	Zc3h8	isoform ratio	XM_063283754.1	0.03	31	0.02	5.6e-04	5.29	1.25e-07	0.45	TRUE
NAcc	Sirpa	intron excision ratio	chr3_137290101_137294612	0.04	1	0.04	1.7e-07	5.27	1.34e-07	0.75	FALSE
NAcc	Ubox5	intron excision ratio	chr3_138261254_138268276	0.02	839	0.01	3.6e-03	-5.26	1.46e-07	0.43	FALSE
NAcc	Ubox5	intron excision ratio	chr3_138271085_138272928	0.52	145	0.61	3.3e-119	5.27	1.34e-07	0.6	FALSE
NAcc	Ubox5	intron excision ratio	chr3_138271085_138272979	0.51	122	0.61	3.9e-118	-5.27	1.36e-07	0.6	FALSE
NAcc	Pced1a	mRNA stability	Pced1a	0.1	1	0.16	4.7e-24	-5.27	1.38e-07	0.47	FALSE
NAcc	Ttl	mRNA stability	Ttl	0.04	2144	0.03	1.1e-05	5.21	1.90e-07	0.52	FALSE
OFC	Pdyn	gene expression	Pdyn	0.52	2304	0.4	1.3e-10	5.25	1.56e-07	0.55	FALSE
OFC	LOC108350462	isoform ratio	XR_005502459.2	0.25	82	0.17	8.2e-05	-5.9	3.72e-09	0.36	FALSE
OFC	Pced1a	mRNA stability	Pced1a	0.24	1479	0.17	6.7e-05	-5.27	1.37e-07	0.43	FALSE
PL	Pced1a	alternative polyA	XM_006235015.4	0.16	1479	0.23	4.1e-25	-5.21	1.85e-07	0.45	FALSE
PL	Pced1a	alternative polyA	XM_039104578.2	0.57	78	0.52	9.3e-66	5.31	1.10e-07	0.55	FALSE
PL	Pced1a	alternative polyA	XM_006235015.4	0.17	1479	0.23	4.0e-25	-5.24	1.59e-07	0.45	FALSE
PL	Pced1a	alternative polyA	XM_039104578.2	0.63	1	0.53	6.3e-68	5.33	9.85e-08	0.56	FALSE
PL	Fbln7	gene expression	Fbln7	0.27	334	0.2	2.4e-21	-5.31	1.11e-07	0.43	FALSE
PL	Ubox5	gene expression	Ubox5	0.14	12	0.16	7.2e-17	-5.29	1.24e-07	0.54	FALSE
PL	Pced1a	isoform ratio	XM_039104578.2	0.44	55	0.49	2.6e-61	5.32	1.03e-07	0.54	FALSE
PL	Ubox5	intron excision ratio	chr3_138271085_138272928	0.61	11	0.63	3.7e-88	5.32	1.03e-07	0.49	TRUE
PL	Zc3h6	intron excision ratio	chr3_136709591_136713027	0.26	9	0.1	5.6e-11	5.45	5.15e-08	0.42	FALSE
PL	Ebf4	mRNA stability	Ebf4	0.12	1683	0.16	1.2e-16	5.27	1.35e-07	0.44	FALSE
PL	Pced1a	mRNA stability	Pced1a	0.15	8	0.16	1.1e-16	-5.52	3.40e-08	0.54	FALSE
PL	Ubox5	mRNA stability	Ubox5	0.02	839	0.01	1.0e-02	-5.26	1.40e-07	0.4	FALSE
pVTA	Pced1a	alternative polyA	XM_006235015.4	0.08	80	0.1	3.4e-08	-5.26	1.43e-07	0.45	FALSE
pVTA	Pced1a	alternative polyA	XM_039104578.2	0.17	226	0.26	1.2e-20	5.29	1.22e-07	0.46	FALSE
pVTA	Zc3h6	alternative TSS	NM_001107772.1	0.06	90	0.06	2.3e-05	5.28	1.31e-07	0.39	FALSE
pVTA	Zc3h6	alternative TSS	XM_008762235.4	0.06	2241	0.06	2.3e-05	-5.21	1.89e-07	0.39	FALSE
pVTA	Zc3h8	alternative TSS	XM_063283754.1	0.09	55	0.08	1.1e-06	5.37	7.99e-08	0.4	FALSE
pVTA	Cpxm1	gene expression	Cpxm1	0.06	13	0.05	7.3e-05	5.33	9.63e-08	0.42	FALSE
pVTA	Fbln7	gene expression	Fbln7	0.47	54	0.46	5.7e-41	-5.49	4.04e-08	0.49	FALSE
pVTA	Mrps26	gene expression	Mrps26	0.23	69	0.2	6.4e-16	-5.22	1.81e-07	0.49	FALSE
pVTA	Pced1a	gene expression	Pced1a	0.05	17	0.06	1.7e-05	-5.22	1.74e-07	0.44	FALSE
pVTA	Ubox5	intron excision ratio	chr3_138271085_138272928	0.72	30	0.74	6.2e-87	5.29	1.21e-07	0.61	FALSE
RMTg	Pced1a	alternative polyA	XM_006235015.4	0.15	1479	0.08	3.9e-03	-5.26	1.46e-07	0.43	FALSE
RMTg	Ubox5	gene expression	Ubox5	0.2	839	0.08	4.5e-03	-5.28	1.30e-07	0.44	FALSE