Hub : Traits : Length with tail : ← : →

chr3:141,582,335-143,940,882

Trait: Length with tail

Best TWAS P = 9.69e-10 · Best GWAS P= 2.45e-09 conditioned to 2.27e-02

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Plcb4	alternative TSS	NM_024353.2	0.08	1407	0.01	1.0e-02	-5.55	2.82e-08	0.36	TRUE
Adipose	Plcb4	gene expression	Plcb4	0.13	1	0.09	2.4e-10	5.25	1.55e-07	0.59	FALSE
Adipose	Plcb4	isoform ratio	XM_063283133.1	0.05	1	0.06	9.7e-08	-5.32	1.02e-07	0.67	FALSE
Adipose	Plcb4	isoform ratio	XM_063283135.1	0.03	4	0.04	7.5e-05	5.48	4.32e-08	0.58	FALSE
Adipose	Plcb4	intron excision ratio	chr3_143493493_143559809	0.65	71	0.53	1.0e-68	-5.24	1.58e-07	0.54	FALSE
Adipose	Plcb4	mRNA stability	Plcb4	0.06	28	0.05	1.6e-06	5.4	6.74e-08	0.53	FALSE
BLA	Plcb4	alternative TSS	XM_039104319.2	0.12	1407	0.05	1.0e-03	6.11	9.69e-10	0.51	TRUE
BLA	Plcb4	alternative TSS	XM_039104319.2	0.09	1407	0.05	1.5e-03	6.03	1.62e-09	0.52	FALSE
BLA	Plcb4	gene expression	Plcb4	0.31	52	0.2	8.6e-11	5.34	9.31e-08	0.63	FALSE
BLA	Plcb4	intron excision ratio	chr3_143493493_143559809	0.05	47	0.03	9.4e-03	6.07	1.25e-09	0.24	FALSE
Brain	Plcb4	alternative TSS	XM_039104319.2	0.57	56	0.39	1.1e-38	5.38	7.43e-08	0.65	FALSE
Brain	Plcb4	alternative TSS	XM_039104319.2	0.56	56	0.42	8.8e-42	5.38	7.58e-08	0.67	TRUE
Brain	Plcb4	alternative TSS	XM_039104325.2	0.23	1	0.2	9.5e-19	5.22	1.81e-07	0.55	FALSE
Brain	Lamp5	gene expression	Lamp5	0.07	41	0.03	6.2e-04	-5.68	1.34e-08	0.07	FALSE
Brain	Plcb4	gene expression	Plcb4	0.56	1	0.5	9.7e-53	5.21	1.90e-07	0.54	TRUE
Brain	Plcb4	isoform ratio	XM_006235085.5	0.21	87	0.14	4.0e-13	5.53	3.15e-08	0.58	TRUE
Brain	Plcb1	intron excision ratio	chr3_143138850_143150657	0.03	1107	0.03	1.3e-03	5.37	7.72e-08	0.25	FALSE
Brain	Plcb1	intron excision ratio	chr3_143138850_143222448	0.02	1107	0.01	2.3e-02	-5.53	3.13e-08	0.33	FALSE
Brain	Plcb4	intron excision ratio	chr3_143493493_143559809	0.44	25	0.25	1.3e-23	-5.25	1.54e-07	0.55	FALSE
Brain	Plcb4	intron excision ratio	chr3_143517457_143559809	0.02	1407	0.02	3.1e-03	-5.27	1.40e-07	0.44	FALSE
Brain	Plcb4	intron excision ratio	chr3_143523533_143559809	0.5	1407	0.32	2.6e-30	5.56	2.64e-08	0.57	FALSE
IC	Plcb4	alternative TSS	XM_039104319.2	0.43	1	0.33	2.0e-14	-5.29	1.22e-07	0.64	FALSE
IC	Plcb4	isoform ratio	XM_006235085.5	0.12	1	0.06	1.6e-03	5.3	1.14e-07	0.05	FALSE
IC	Plcb4	intron excision ratio	chr3_143493493_143559809	0.33	9	0.32	3.9e-14	-5.29	1.26e-07	0.64	TRUE
IL	Plcb1	gene expression	Plcb1	0.22	1107	0.11	1.3e-03	5.36	8.12e-08	0.27	FALSE
IL	Plcb4	gene expression	Plcb4	0.56	1	0.3	6.7e-08	5.29	1.22e-07	0.32	FALSE
LHb	Plcb4	gene expression	Plcb4	0.31	1	0.14	2.9e-04	5.22	1.81e-07	0.06	FALSE
Liver	Plcb1	gene expression	Plcb1	0.05	33	0.04	5.8e-05	5.21	1.90e-07	0.24	FALSE
Liver	Hao1	mRNA stability	Hao1	0.39	47	0.27	9.0e-30	-5.25	1.52e-07	0.14	TRUE
NAcc	Plcb4	alternative TSS	XM_039104319.2	0.08	1	0.06	2.7e-09	-5.22	1.75e-07	0.56	FALSE
NAcc	Plcb4	alternative TSS	XM_039104319.2	0.06	1	0.05	6.6e-08	-5.23	1.70e-07	0.56	FALSE
NAcc	Plcb4	gene expression	Plcb4	0.11	24	0.14	1.0e-20	5.44	5.31e-08	0.65	FALSE
NAcc	Plcb1	intron excision ratio	chr3_143138850_143222448	0.04	1	0.03	6.2e-05	5.62	1.91e-08	0.78	FALSE
NAcc	Plcb4	intron excision ratio	chr3_143493493_143559809	0.1	17	0.06	8.3e-09	-5.28	1.28e-07	0.54	FALSE
OFC	Plcb4	gene expression	Plcb4	0.52	229	0.46	1.6e-12	5.46	4.77e-08	0.61	FALSE
PL	Plcb4	alternative TSS	XM_039104317.2	0.03	1	0.03	1.4e-04	5.27	1.37e-07	0.06	FALSE
PL	Plcb4	alternative TSS	XM_039104319.2	0.14	5	0.11	1.4e-11	5.35	8.97e-08	0.57	FALSE
PL	Plcb4	alternative TSS	XM_039104317.2	0.02	1	0.02	1.8e-03	5.22	1.75e-07	0.04	FALSE
PL	Plcb4	alternative TSS	XM_039104319.2	0.16	8	0.13	1.5e-13	5.47	4.56e-08	0.58	FALSE
PL	Plcb4	alternative TSS	XM_039104325.2	0.05	1	0.03	1.8e-04	5.22	1.81e-07	0.08	FALSE
PL	Plcb1	intron excision ratio	chr3_143138850_143150657	0.02	1107	0.01	9.9e-03	5.44	5.30e-08	0.26	FALSE
PL	Plcb4	intron excision ratio	chr3_143493493_143559809	0.16	1407	0.09	3.3e-10	-6.02	1.73e-09	0.57	FALSE
pVTA	Plcb4	alternative TSS	XM_039104325.2	0.1	14	0.13	1.7e-10	5.42	5.97e-08	0.63	FALSE
pVTA	Plcb4	alternative TSS	XM_039104319.2	0.38	58	0.39	2.3e-33	5.4	6.67e-08	0.67	FALSE
pVTA	Plcb4	alternative TSS	XM_039104325.2	0.13	65	0.13	2.2e-10	5.37	7.89e-08	0.63	FALSE
pVTA	Plcb4	gene expression	Plcb4	0.1	1	0.06	1.5e-05	5.29	1.20e-07	0.43	FALSE
pVTA	Plcb4	isoform ratio	XM_063283134.1	0.08	1407	0.08	2.8e-07	6.07	1.26e-09	0.62	FALSE
pVTA	Plcb4	intron excision ratio	chr3_143517457_143559809	0.02	1	0.02	1.1e-02	5.33	1.00e-07	0.05	FALSE
pVTA	Plcb4	intron excision ratio	chr3_143523533_143559809	0.25	66	0.29	1.1e-23	5.36	8.52e-08	0.66	FALSE