Best TWAS P=2.57e-13 · Best GWAS P=7.82e-14 conditioned to NaN
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Grk5 | alternative polyA | XM_039088801.1 | 0.1 | 68 | 0.13 | 8.2e-14 | 5.69 | 1.24e-08 | 0 | FALSE |
| Adipose | Grk5 | alternative polyA | XM_039088820.1 | 0.07 | 1 | 0.09 | 1.5e-10 | -5.34 | 9.43e-08 | 0 | FALSE |
| Adipose | Grk5 | alternative polyA | XM_039088801.1 | 0.11 | 1 | 0.13 | 1.5e-14 | 5.26 | 1.41e-07 | 0 | FALSE |
| Adipose | Grk5 | alternative polyA | XM_039088820.1 | 0.07 | 1 | 0.09 | 3.3e-10 | -5.34 | 9.43e-08 | 0 | FALSE |
| Adipose | Dennd10 | gene expression | Dennd10 | 0.03 | 5 | 0.04 | 8.4e-05 | -5.28 | 1.32e-07 | 0.01 | FALSE |
| Adipose | Emx2os | gene expression | Emx2os | 0.13 | 1 | 0.1 | 2.9e-11 | 6 | 1.95e-09 | 0.45 | FALSE |
| Adipose | Grk5 | gene expression | Grk5 | 0.2 | 143 | 0.24 | 5.3e-26 | -6.12 | 9.09e-10 | 0 | FALSE |
| Adipose | LOC120100068 | gene expression | LOC120100068 | 0.06 | 2114 | 0.04 | 9.9e-06 | -5.33 | 9.99e-08 | 0.63 | FALSE |
| Adipose | Prdx3 | gene expression | Prdx3 | 0.18 | 1 | 0.23 | 1.2e-24 | 5.46 | 4.82e-08 | 0 | FALSE |
| Adipose | Zfp950 | gene expression | Zfp950 | 0.03 | 1 | 0.03 | 6.1e-04 | -5.52 | 3.34e-08 | 0.03 | FALSE |
| Adipose | Grk5 | isoform ratio | XM_039088828.1 | 0.03 | 1 | 0.01 | 1.3e-02 | 5.34 | 9.43e-08 | 0.03 | FALSE |
| Adipose | Emx2os | mRNA stability | Emx2os | 0.14 | 1 | 0.11 | 5.1e-12 | 5.49 | 3.94e-08 | 0.04 | TRUE |
| Adipose | Grk5 | mRNA stability | Grk5 | 0.02 | 1 | 0.01 | 5.3e-02 | -6.15 | 7.72e-10 | 0.03 | FALSE |
| BLA | Grk5 | alternative polyA | XM_039088801.1 | 0.06 | 1 | 0.03 | 1.2e-02 | 7.02 | 2.28e-12 | 0.05 | FALSE |
| BLA | Ces2c | gene expression | Ces2c | 0.24 | 1 | 0.16 | 8.0e-09 | -5.33 | 9.72e-08 | 0.07 | FALSE |
| BLA | Emx2os | gene expression | Emx2os | 0.34 | 1 | 0.18 | 3.7e-10 | 5.89 | 3.86e-09 | 0.3 | FALSE |
| BLA | Rab11fip2 | gene expression | Rab11fip2 | 0.07 | 1 | 0.04 | 2.4e-03 | 5.6 | 2.20e-08 | 0.04 | FALSE |
| BLA | Sfxn4 | gene expression | Sfxn4 | 0.08 | 1 | 0.04 | 3.6e-03 | -6.57 | 5.05e-11 | 0.04 | FALSE |
| BLA | Emx2os | mRNA stability | Emx2os | 0.13 | 2224 | 0.04 | 3.8e-03 | -6.03 | 1.63e-09 | 0.28 | FALSE |
| BLA | Grk5 | mRNA stability | Grk5 | 0.05 | 1 | 0.01 | 1.3e-01 | 5.33 | 9.58e-08 | 0.04 | FALSE |
| BLA | Rab11fip2 | mRNA stability | Rab11fip2 | 0.07 | 3 | 0.03 | 8.0e-03 | -6.71 | 1.96e-11 | 0.32 | FALSE |
| Brain | Grk5 | alternative polyA | XM_039088801.1 | 0.02 | 1 | 0.03 | 6.0e-04 | 5.34 | 9.43e-08 | 0.03 | FALSE |
| Brain | Grk5 | alternative polyA | XM_039088820.1 | 0.03 | 1 | 0.04 | 1.1e-04 | -5.21 | 1.84e-07 | 0.03 | FALSE |
| Brain | Grk5 | alternative polyA | XM_039088801.1 | 0.02 | 1 | 0.03 | 8.1e-04 | 5.34 | 9.43e-08 | 0.03 | FALSE |
| Brain | Grk5 | alternative polyA | XM_039088820.1 | 0.03 | 1 | 0.04 | 1.1e-04 | -5.21 | 1.84e-07 | 0.03 | FALSE |
| Brain | LOC102550729 | gene expression | LOC102550729 | 0.05 | 1 | 0.06 | 4.1e-06 | -5.22 | 1.77e-07 | 0.01 | FALSE |
| Brain | Rab11fip2 | gene expression | Rab11fip2 | 0.1 | 16 | 0.06 | 1.2e-06 | 6.88 | 5.94e-12 | 0.94 | FALSE |
| Brain | Cacul1 | isoform ratio | NM_001014248.2 | 0.12 | 1786 | 0.09 | 8.4e-09 | 5.75 | 8.88e-09 | 0.6 | FALSE |
| Brain | Grk5 | isoform ratio | XM_039088828.1 | 0.03 | 8 | 0.04 | 1.6e-04 | -5.74 | 9.68e-09 | 0.03 | FALSE |
| Brain | Emx2os | mRNA stability | Emx2os | 0.11 | 1 | 0.1 | 1.2e-09 | 6.01 | 1.89e-09 | 0.46 | FALSE |
| Brain | Grk5 | mRNA stability | Grk5 | 0.03 | 17 | 0.03 | 4.8e-04 | 6.73 | 1.73e-11 | 0.26 | FALSE |
| IL | Sfxn4 | gene expression | Sfxn4 | 0.19 | 13 | 0.09 | 3.1e-03 | 6.03 | 1.64e-09 | 0.06 | TRUE |
| LHb | Ces2c | gene expression | Ces2c | 0.25 | 584 | 0.17 | 9.1e-05 | 6.15 | 7.95e-10 | 0.71 | FALSE |
| LHb | Rab11fip2 | gene expression | Rab11fip2 | 0.23 | 1 | 0.12 | 8.4e-04 | 6.67 | 2.55e-11 | 0.05 | FALSE |
| Liver | Nanos1 | gene expression | Nanos1 | 0.08 | 1 | 0.05 | 1.1e-06 | 5.64 | 1.66e-08 | 0 | FALSE |
| Liver | Ces2c | mRNA stability | Ces2c | 0.02 | 1 | 0.02 | 2.3e-03 | 5.33 | 9.58e-08 | 0.03 | FALSE |
| NAcc | Grk5 | alternative polyA | XM_039088801.1 | 0.02 | 1 | 0.03 | 2.1e-04 | 5.29 | 1.22e-07 | 0.03 | FALSE |
| NAcc | Grk5 | alternative polyA | XM_039088801.1 | 0.02 | 1 | 0.03 | 5.5e-04 | 5.29 | 1.22e-07 | 0.03 | FALSE |
| NAcc | Ces2c | gene expression | Ces2c | 0.18 | 16 | 0.21 | 9.9e-24 | -5.75 | 9.05e-09 | 0.08 | FALSE |
| NAcc | Emx2os | gene expression | Emx2os | 0.33 | 6 | 0.22 | 1.7e-24 | -5.78 | 7.60e-09 | 0.61 | FALSE |
| NAcc | LOC120100068 | gene expression | LOC120100068 | 0.07 | 2115 | 0.02 | 7.8e-04 | -5.91 | 3.41e-09 | 0.28 | FALSE |
| NAcc | Prlhr | gene expression | Prlhr | 0.17 | 76 | 0.12 | 1.1e-13 | -7.32 | 2.57e-13 | 0.64 | TRUE |
| NAcc | Sfxn4 | gene expression | Sfxn4 | 0.05 | 1 | 0.06 | 3.4e-07 | -6.7 | 2.04e-11 | 0.35 | FALSE |
| NAcc | Zfp950 | gene expression | Zfp950 | 0.07 | 22 | 0.08 | 3.7e-09 | -7.17 | 7.31e-13 | 0.34 | FALSE |
| NAcc | Cacul1 | isoform ratio | NM_001014248.2 | 0.06 | 1 | 0.06 | 6.0e-07 | -6.66 | 2.66e-11 | 0.26 | FALSE |
| NAcc | Dennd10 | mRNA stability | Dennd10 | 0.02 | 1619 | 0.02 | 8.7e-04 | -5.37 | 7.68e-08 | 0.23 | TRUE |
| NAcc | Emx2os | mRNA stability | Emx2os | 0.07 | 1 | 0.03 | 3.1e-04 | 6.06 | 1.35e-09 | 0.25 | FALSE |
| NAcc | Fam204a | mRNA stability | Fam204a | 0.02 | 1 | 0.02 | 3.1e-03 | -6.13 | 8.73e-10 | 0.03 | FALSE |
| NAcc | Grk5 | mRNA stability | Grk5 | 0.06 | 1449 | 0.05 | 6.2e-07 | -6.99 | 2.65e-12 | 0.23 | FALSE |
| OFC | Rab11fip2 | gene expression | Rab11fip2 | 0.26 | 2382 | 0.2 | 1.7e-05 | -5.87 | 4.47e-09 | 0.11 | FALSE |
| PL | Emx2os | gene expression | Emx2os | 0.37 | 11 | 0.3 | 4.3e-33 | -5.88 | 4.08e-09 | 0.6 | FALSE |
| PL | Cacul1 | isoform ratio | NM_001014248.2 | 0.03 | 1 | 0.02 | 1.2e-03 | -6.96 | 3.35e-12 | 0.08 | FALSE |
| PL | Cacul1 | intron excision ratio | chr1_259677583_259686255 | 0.02 | 1 | 0.02 | 1.6e-03 | -6.63 | 3.44e-11 | 0.03 | FALSE |
| PL | Emx2os | mRNA stability | Emx2os | 0.12 | 13 | 0.06 | 1.1e-06 | -6.14 | 8.30e-10 | 0.59 | FALSE |
| pVTA | Ces2c | gene expression | Ces2c | 0.4 | 1 | 0.32 | 1.3e-14 | -5.48 | 4.23e-08 | 0.14 | FALSE |
| pVTA | Emx2os | gene expression | Emx2os | 0.25 | 1 | 0.13 | 3.8e-06 | 5.5 | 3.83e-08 | 0.04 | FALSE |
| pVTA | Prlhr | gene expression | Prlhr | 0.09 | 1 | 0.07 | 5.1e-04 | 6.96 | 3.35e-12 | 0.06 | FALSE |
| pVTA | Sfxn4 | gene expression | Sfxn4 | 0.1 | 1405 | 0.08 | 1.8e-04 | 6 | 2.02e-09 | 0.26 | FALSE |
| pVTA | Grk5 | mRNA stability | Grk5 | 0.09 | 1 | 0.06 | 1.4e-03 | 6.03 | 1.64e-09 | 0.04 | FALSE |