Hub : Traits : Right kidney weight : ← : →

chr1:80,926,895-89,701,879

Trait: Right kidney weight

Best TWAS P = 1.22e-10 · Best GWAS P= 3.54e-09 conditioned to 1.00e+00

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Zfp111	isoform ratio	NM_133323.1	0.05	95	0.05	4.2e-06	5.33	9.83e-08	0.54	FALSE
Adipose	Fkrp	mRNA stability	Fkrp	0.03	18	0.02	2.4e-03	-5.27	1.38e-07	0.37	FALSE
BLA	Ccdc61	gene expression	Ccdc61	0.1	94	0.07	1.8e-04	-5.43	5.55e-08	0.33	FALSE
BLA	Lig1	gene expression	Lig1	0.33	1	0.18	9.7e-10	5.34	9.32e-08	0.6	FALSE
Brain	Arhgap35	isoform ratio	NM_001271132.1	0.03	100	0.02	3.2e-03	-5.23	1.72e-07	0.45	FALSE
Brain	Lig1	intron excision ratio	chr1_83279770_83281290	0.16	5	0.16	7.8e-15	5.55	2.81e-08	0.66	FALSE
Brain	Lig1	intron excision ratio	chr1_83280733_83281290	0.08	12	0.07	7.7e-07	-5.69	1.28e-08	0.66	FALSE
Brain	Ccdc61	mRNA stability	Ccdc61	0.02	19	0.02	4.1e-03	-5.41	6.17e-08	0.32	FALSE
Brain	Lig1	mRNA stability	Lig1	0.21	38	0.19	6.9e-18	5.87	4.33e-09	0.66	FALSE
Brain	Zswim9	mRNA stability	Zswim9	0.04	1	0.04	8.4e-05	5.33	9.99e-08	0.08	FALSE
Eye	Gemin7	alternative TSS	XM_006228461.5	0.39	102	0.14	3.3e-03	5.29	1.20e-07	0.3	TRUE
Eye	Lig1	gene expression	Lig1	0.34	1	0.15	2.6e-03	5.36	8.31e-08	0.06	FALSE
Eye	Pnma8b	isoform ratio	NM_001107481.1	0.5	111	0.24	1.6e-04	5.26	1.48e-07	0.33	FALSE
IL	LOC108349062	isoform ratio	XR_001835682.3	0.14	223	0.1	1.9e-03	-5.41	6.30e-08	0.31	TRUE
IL	Ppp1r13l	isoform ratio	NM_001427130.1	0.2	17	0.15	1.9e-04	5.28	1.32e-07	0.44	FALSE
LHb	Lig1	gene expression	Lig1	0.19	1659	0.09	4.9e-03	5.28	1.28e-07	0.51	FALSE
LHb	Lig1	mRNA stability	Lig1	0.35	555	0.22	7.5e-06	5.36	8.41e-08	0.63	FALSE
Liver	Sult2a1	alternative polyA	NM_131903.1	0.09	2	0.09	8.5e-10	-5.48	4.29e-08	0.97	FALSE
Liver	Sult2a1	alternative polyA	XM_063281068.1	0.1	2	0.09	7.6e-10	5.38	7.60e-08	0.97	FALSE
Liver	Zfp446	alternative TSS	XM_017589934.3	0.08	96	0.01	2.9e-02	6.09	1.16e-09	0.21	FALSE
Liver	Zfp446	alternative TSS	XM_017589934.3	0.11	96	0.02	4.6e-03	5.35	8.60e-08	0.41	FALSE
Liver	Apoc2	gene expression	Apoc2	0.49	211	0.33	5.2e-37	5.33	1.01e-07	0.54	FALSE
Liver	Selenow	gene expression	Selenow	0.63	949	0.24	1.3e-26	5.46	4.81e-08	0.85	FALSE
Liver	Sult2a1	gene expression	Sult2a1	0.18	2	0.26	3.3e-28	5.54	3.06e-08	0.98	TRUE
Liver	Gemin7	isoform ratio	XM_006228461.5	0.03	68	0.02	1.9e-03	5.27	1.36e-07	0.47	FALSE
Liver	LOC120099768	intron excision ratio	chr1_85186709_85200351	0.8	33	0.39	1.9e-45	-5.22	1.82e-07	0.82	FALSE
Liver	LOC120099768	intron excision ratio	chr1_85200528_85204893	0.82	31	0.41	2.2e-49	5.23	1.72e-07	0.82	FALSE
Liver	Sult2a1	intron excision ratio	chr1_84600558_84629968	0.08	1	0.06	2.7e-07	-5.27	1.39e-07	0.97	TRUE
Liver	Zfp324	intron excision ratio	chr1_82674660_82675044	0.25	751	0.12	7.4e-13	5.21	1.86e-07	0.58	FALSE
Liver	Zfp446	intron excision ratio	chr1_82674660_82675044	0.25	749	0.12	7.4e-13	5.23	1.69e-07	0.55	FALSE
Liver	Lig1	mRNA stability	Lig1	0.04	1659	0.01	7.4e-03	5.23	1.66e-07	0.49	FALSE
NAcc	Gemin7	alternative TSS	XM_006228461.5	0.13	29	0.16	1.1e-23	5.27	1.38e-07	0.52	FALSE
NAcc	Bcam	gene expression	Bcam	0.15	74	0.19	1.0e-27	5.24	1.61e-07	0.51	FALSE
NAcc	Fkrp	gene expression	Fkrp	0.16	1080	0.11	4.3e-16	5.28	1.27e-07	0.49	FALSE
NAcc	Lig1	intron excision ratio	chr1_83280733_83281290	0.02	5	0.02	6.2e-04	-5.33	9.56e-08	0.39	TRUE
NAcc	Zbtb45	intron excision ratio	chr1_82710277_82711694	0.09	1	0.04	1.1e-06	-5.49	3.97e-08	0.99	FALSE
OFC	Znf8	alternative polyA	NM_001402794.1	0.69	735	0.02	1.3e-01	-5.22	1.78e-07	0.32	TRUE
OFC	Zbtb45	alternative TSS	XM_006228115.5	0.36	776	0.04	3.8e-02	5.88	4.20e-09	0.51	FALSE
OFC	LOC108348449	gene expression	LOC108348449	0.34	14	0.06	1.2e-02	-6.44	1.22e-10	0.53	TRUE
OFC	Fosb	mRNA stability	Fosb	0.16	11	0.12	7.3e-04	5.26	1.45e-07	0.38	FALSE
OFC	Lig1	mRNA stability	Lig1	0.22	1659	0.05	2.1e-02	5.33	9.58e-08	0.45	FALSE
OFC	Nova2	mRNA stability	Nova2	0.19	299	0.13	6.2e-04	-5.4	6.82e-08	0.34	FALSE
PL	Mzf1	alternative TSS	XM_006228116.5	0.04	36	0.02	6.8e-03	5.47	4.50e-08	0.62	FALSE
PL	Zswim9	alternative TSS	XM_039100810.2	0.03	1660	0.02	3.3e-03	5.31	1.09e-07	0.54	FALSE
PL	Zswim9	gene expression	Zswim9	0.03	28	0.02	1.8e-03	5.92	3.26e-09	0.53	FALSE
PL	Lig1	intron excision ratio	chr1_83279770_83281290	0.07	58	0.05	1.3e-06	5.88	4.13e-09	0.66	FALSE
PL	Lig1	intron excision ratio	chr1_83280733_83281290	0.05	41	0.04	2.7e-05	-5.63	1.79e-08	0.65	FALSE
PL	Zbtb45	intron excision ratio	chr1_82710277_82711694	0.04	34	0.02	1.1e-03	-5.55	2.89e-08	0.54	FALSE
PL	Ercc2	mRNA stability	Ercc2	0.03	8	0.03	1.2e-04	-5.23	1.66e-07	0.53	FALSE
PL	Lig1	mRNA stability	Lig1	0.16	25	0.11	1.7e-12	5.67	1.44e-08	0.66	FALSE
pVTA	Fbxo46	intron excision ratio	chr1_87898229_87911724	0.79	10	0.09	1.2e-07	5.37	7.78e-08	0.32	FALSE
pVTA	Lig1	mRNA stability	Lig1	0.09	1659	0.02	4.9e-03	5.4	6.60e-08	0.51	FALSE
RMTg	Vom1r47	alternative TSS	XM_063270359.1	0.3	177	0.11	8.0e-04	-5.66	1.50e-08	0.42	TRUE
RMTg	Vom1r47	alternative TSS	XM_063270367.1	0.28	166	0.09	1.9e-03	5.52	3.31e-08	0.32	FALSE
RMTg	Vom1r47	isoform ratio	XM_063270359.1	0.29	143	0.15	1.1e-04	-5.5	3.77e-08	0.53	FALSE
RMTg	Zfp94	mRNA stability	Zfp94	0.13	36	0.05	1.7e-02	-5.21	1.85e-07	0.35	FALSE