chr1:257,860,954-260,518,987

Trait: Left kidney weight

Best TWAS P=2.67e-14 · Best GWAS P=1.97e-13 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Dennd10 gene expression ENSRNOG00000010230 0.03 1 0.03 2.5e-04 -5.34 9.14e-08 0.02 FALSE
Adipose Prdx3 gene expression ENSRNOG00000010958 0.19 34 0.22 1.6e-23 -5.83 5.48e-09 0 TRUE
Adipose Grk5 gene expression ENSRNOG00000011439 0.17 24 0.22 8.6e-24 5.8 6.44e-09 0 FALSE
BLA Rab11fip2 gene expression ENSRNOG00000009523 0.11 1 0.05 1.1e-03 -5.67 1.46e-08 0.04 FALSE
BLA Ces2c gene expression ENSRNOG00000036571 0.26 16 0.2 1.1e-10 5.27 1.34e-07 0.01 FALSE
BLA Sfxn4 gene expression ENSRNOG00000036572 0.07 1 0.02 2.1e-02 7.17 7.27e-13 0.17 FALSE
BLA Cacul1 isoform ratio ENSRNOT00000084760 0.07 1 0 2.4e-01 -5.14 2.82e-07 0.04 FALSE
Brain Rab11fip2 gene expression ENSRNOG00000009523 0.09 2 0.06 3.6e-06 -5.94 2.80e-09 0.81 TRUE
Brain Nanos1 gene expression ENSRNOG00000025060 0.03 58 0.01 2.2e-02 -6.3 2.92e-10 0.37 FALSE
Brain Ces2c gene expression ENSRNOG00000036571 0.2 597 0.29 3.4e-27 5.55 2.89e-08 0 FALSE
Brain Cacul1 isoform ratio ENSRNOT00000050617 0.14 1 0.11 3.3e-10 6.92 4.61e-12 0.77 FALSE
Brain Zfp950 isoform ratio ENSRNOT00000047883 0.04 954 0.05 9.3e-06 5.62 1.90e-08 0.02 FALSE
Eye ENSRNOG00000065260 gene expression ENSRNOG00000065260 0.45 1 0.18 9.5e-04 -6.69 2.25e-11 0.06 FALSE
IL Ces2c gene expression ENSRNOG00000036571 0.35 1 0.35 2.3e-09 5.17 2.33e-07 0.03 FALSE
IL Sfxn4 gene expression ENSRNOG00000036572 0.19 1 0.13 5.3e-04 5.2 1.95e-07 0.05 FALSE
LHb Ces2c gene expression ENSRNOG00000036571 0.25 594 0.19 2.3e-05 5.97 2.36e-09 0.12 FALSE
Liver Rab11fip2 gene expression ENSRNOG00000009523 0.03 2371 0.01 1.3e-02 -6.98 2.97e-12 0.39 TRUE
Liver Nanos1 gene expression ENSRNOG00000025060 0.03 1 0.02 1.2e-03 -5.62 1.92e-08 0.03 FALSE
Liver Zfp950 gene expression ENSRNOG00000032668 0.03 1 0.01 7.7e-03 -6.73 1.69e-11 0.04 FALSE
Liver Cacul1 isoform ratio ENSRNOT00000050617 0.03 1 0.02 1.3e-03 6.01 1.82e-09 0.03 TRUE
Liver Cacul1 mRNA stability ENSRNOG00000009954 0.03 1 0.01 1.4e-02 6.57 5.20e-11 0.03 FALSE
NAcc Prlhr gene expression ENSRNOG00000009922 0.14 1904 0.11 2.3e-08 5.65 1.61e-08 0.6 FALSE
NAcc Zfp950 gene expression ENSRNOG00000032668 0.05 15 0.02 7.3e-03 7.61 2.67e-14 0.68 TRUE
NAcc Ces2c gene expression ENSRNOG00000036571 0.22 597 0.22 5.3e-16 5.95 2.68e-09 0.01 FALSE
NAcc Sfxn4 gene expression ENSRNOG00000036572 0.07 1 0.04 3.8e-04 6.9 5.24e-12 0.08 FALSE
NAcc Cacul1 isoform ratio ENSRNOT00000050617 0.05 1781 0.05 9.6e-05 5.84 5.23e-09 0.61 FALSE
NAcc Cacul1 isoform ratio ENSRNOT00000084760 0.05 1781 0.05 1.6e-04 -5.87 4.42e-09 0.61 FALSE
OFC Rab11fip2 gene expression ENSRNOG00000009523 0.3 17 0.27 5.1e-07 -6.19 5.94e-10 0.21 FALSE
OFC Ces2c gene expression ENSRNOG00000036571 0.38 1 0.42 3.6e-11 5.24 1.62e-07 0.01 FALSE
OFC Sfxn4 gene expression ENSRNOG00000036572 0.41 17 0.26 7.0e-07 5.2 2.02e-07 0.06 FALSE
OFC Rab11fip2 mRNA stability ENSRNOG00000009523 0.16 1 0.19 2.9e-05 -6.34 2.27e-10 0.05 FALSE
PL Rab11fip2 gene expression ENSRNOG00000009523 0.06 76 0.05 1.5e-04 -6.4 1.58e-10 0.32 FALSE
PL Ces2c gene expression ENSRNOG00000036571 0.39 1 0.38 3.4e-30 5.43 5.74e-08 0 FALSE
PL ENSRNOG00000068145 gene expression ENSRNOG00000068145 0.06 13 0.04 6.9e-04 -5.14 2.81e-07 0.06 TRUE
PL Cacul1 isoform ratio ENSRNOT00000050617 0.03 1 0.02 1.8e-02 7.23 4.88e-13 0.18 FALSE