Best TWAS P=1.15e-07 · Best GWAS P=9.62e-07 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Clasrp | alternative polyA | ENSRNOT00000075144 | 0.06 | 33 | 0.03 | 2.1e-04 | -5.1 | 3.38e-07 | 0.44 | FALSE |
Adipose | Fbxo46 | alternative TSS | ENSRNOT00000012082 | 0.05 | 68 | 0.04 | 3.9e-05 | 5.12 | 2.99e-07 | 0.42 | FALSE |
Adipose | Fbxo46 | alternative TSS | ENSRNOT00000118710 | 0.04 | 124 | 0.03 | 1.4e-04 | -5.19 | 2.05e-07 | 0.41 | FALSE |
Adipose | Ercc1 | mRNA stability | ENSRNOG00000017839 | 0.03 | 143 | 0.02 | 3.0e-03 | 5.16 | 2.46e-07 | 0.46 | FALSE |
Adipose | Klc3 | mRNA stability | ENSRNOG00000018101 | 0.02 | 357 | 0.01 | 9.8e-03 | 5.23 | 1.65e-07 | 0.41 | FALSE |
Brain | Ercc2 | mRNA stability | ENSRNOG00000017753 | 0.16 | 11 | 0.09 | 1.8e-08 | -5.29 | 1.21e-07 | 0.64 | FALSE |
Liver | Vasp | alternative TSS | ENSRNOT00000022214 | 0.05 | 101 | 0.03 | 6.0e-04 | -5.23 | 1.68e-07 | 0.51 | FALSE |
Liver | Vasp | alternative TSS | ENSRNOT00000088676 | 0.05 | 109 | 0.03 | 8.1e-04 | 5.15 | 2.57e-07 | 0.51 | FALSE |
Liver | Eml2 | isoform ratio | ENSRNOT00000078336 | 0.14 | 26 | 0.01 | 7.2e-03 | 5.14 | 2.68e-07 | 0.38 | FALSE |
NAcc | Snrpd2 | gene expression | ENSRNOG00000015844 | 0.05 | 86 | 0.03 | 2.8e-03 | 5.3 | 1.15e-07 | 0.42 | TRUE |
NAcc | Fbxo46 | isoform ratio | ENSRNOT00000012082 | 0.06 | 10 | 0.05 | 7.4e-05 | 5.26 | 1.44e-07 | 0.45 | FALSE |
NAcc | Dmwd | intron excision ratio | chr1:78734515:78735157 | 0.05 | 8 | 0.05 | 2.0e-04 | -5.14 | 2.76e-07 | 0.4 | FALSE |
NAcc | Dmpk | intron excision ratio | chr1:78734515:78735157 | 0.05 | 12 | 0.05 | 2.0e-04 | -5.14 | 2.75e-07 | 0.4 | FALSE |