Best TWAS P = 6.25e-08 · Best GWAS P= 1.16e-07 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| BLA | Hs3st4 | mRNA stability | Hs3st4 | 0.08 | 2432 | 0.05 | 8.2e-04 | -5.23 | 1.66e-07 | 0.41 | FALSE |
| Brain | Tnrc6a | gene expression | Tnrc6a | 0.26 | 37 | 0.13 | 6.6e-12 | 5.41 | 6.25e-08 | 0.84 | TRUE |
| Brain | Zkscan2 | gene expression | Zkscan2 | 0.1 | 1 | 0.09 | 2.0e-08 | 5.22 | 1.78e-07 | 0.8 | FALSE |
| Liver | Lcmt1 | intron excision ratio | chr1_187389064_187390973 | 0.05 | 1839 | 0.01 | 1.4e-02 | 5.36 | 8.26e-08 | 0.31 | FALSE |
| NAcc | Lcmt1 | gene expression | Lcmt1 | 0.11 | 1 | 0.12 | 1.8e-17 | 5.24 | 1.62e-07 | 0.84 | FALSE |