Hub : Traits : Body weight : ← : →

chr3:114,120,424-117,823,761

Trait: Body weight

Best TWAS P=3.45e-08 · Best GWAS P=2.97e-08 conditioned to 1.00e+00

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Snrpb	alternative polyA	NM_134358.1	0.15	37	0.17	2.2e-18	5.28	1.31e-07	0.42	FALSE
Adipose	Snrpb	alternative polyA	XM_039104198.1	0.15	37	0.17	7.7e-19	-5.28	1.26e-07	0.42	FALSE
Adipose	Zc3h6	alternative TSS	NM_001107772.1	0.04	1	0.02	4.8e-03	-5.23	1.70e-07	0.03	FALSE
Adipose	Cpxm1	gene expression	Cpxm1	0.05	1	0.05	2.5e-06	5.39	7.13e-08	0.66	FALSE
Adipose	LOC129351010	gene expression	LOC129351010	0.03	1	0.02	3.1e-03	-5.39	7.13e-08	0.05	FALSE
Adipose	Mrps26	gene expression	Mrps26	0.04	1	0.02	5.5e-03	5.2	1.97e-07	0.04	FALSE
Adipose	Nop56	gene expression	Nop56	0.03	1	0.02	3.6e-03	-5.2	2.04e-07	0.04	FALSE
Adipose	Pced1a	gene expression	Pced1a	0.03	1	0.02	1.4e-03	5.2	1.95e-07	0.04	FALSE
Adipose	Ubox5	gene expression	Ubox5	0.11	1	0.08	6.6e-09	5.39	7.13e-08	0.8	FALSE
Adipose	Zc3h6	gene expression	Zc3h6	0.12	1	0.06	9.7e-07	-5.23	1.70e-07	0.63	FALSE
Adipose	Snrpb	isoform ratio	NM_134358.1	0.15	4	0.16	1.5e-17	-5.39	6.85e-08	0.42	FALSE
Adipose	Snrpb	isoform ratio	XM_039104198.1	0.16	17	0.17	9.0e-19	5.34	9.29e-08	0.42	FALSE
Adipose	Zc3h6	isoform ratio	XM_006234999.4	0.06	1	0.03	1.7e-04	-5.23	1.70e-07	0.12	FALSE
Adipose	Zc3h6	isoform ratio	XM_039104996.1	0.07	1	0.03	1.2e-04	5.23	1.70e-07	0.1	FALSE
Adipose	Fastkd5	intron excision ratio	chr3_117833084_117846375	0.03	1	0.01	2.5e-02	-5.2	1.98e-07	0.03	FALSE
Adipose	Ptpra	intron excision ratio	chr3_117705569_117714664	0.02	1	0.01	7.1e-02	-5.2	1.97e-07	0.03	FALSE
Adipose	Ubox5	intron excision ratio	chr3_117833084_117846375	0.03	1	0.01	2.5e-02	-5.2	1.98e-07	0.03	FALSE
Adipose	Ubox5	mRNA stability	Ubox5	0.04	1	0.03	7.4e-04	5.39	7.13e-08	0.08	FALSE
Adipose	Zc3h6	mRNA stability	Zc3h6	0.12	1	0.06	1.5e-07	-5.23	1.70e-07	0.69	FALSE
BLA	Zc3h6	alternative polyA	NM_001107772.1	0.2	1	0.13	2.1e-07	5.3	1.16e-07	0.73	FALSE
BLA	Zc3h6	alternative polyA	XM_039104996.1	0.2	1	0.13	3.3e-07	-5.3	1.16e-07	0.71	FALSE
BLA	Zc3h6	alternative polyA	NM_001107772.1	0.2	1	0.13	2.3e-07	5.3	1.16e-07	0.73	FALSE
BLA	Zc3h6	alternative polyA	XM_006234999.4	0.19	1	0.12	3.8e-07	-5.3	1.16e-07	0.71	FALSE
BLA	Bcl2l11	gene expression	Bcl2l11	0.06	1671	0.03	9.6e-03	5.24	1.59e-07	0.39	FALSE
BLA	LOC103691888	gene expression	LOC103691888	0.34	1	0.2	8.9e-11	-5.27	1.36e-07	0.66	FALSE
BLA	Mrps26	gene expression	Mrps26	0.14	1	0.06	4.3e-04	5.49	4.10e-08	0.16	FALSE
BLA	Pced1a	gene expression	Pced1a	0.19	1	0.16	4.2e-09	-5.39	7.13e-08	0.76	FALSE
BLA	Ubox5	gene expression	Ubox5	0.68	1	0.1	5.0e-06	5.2	2.04e-07	0.47	FALSE
BLA	Pced1a	isoform ratio	XM_039104578.1	0.22	1	0.2	9.2e-11	-5.39	7.13e-08	0.76	FALSE
BLA	Zc3h6	isoform ratio	XM_039104996.1	0.1	1	0.04	5.8e-03	5.18	2.22e-07	0.06	FALSE
BLA	Fastkd5	intron excision ratio	chr3_117820001_117847621	0.13	1	0.07	1.3e-04	5.2	1.98e-07	0.12	FALSE
BLA	Ubox5	intron excision ratio	chr3_117817986_117819831	0.87	816	0.51	4.2e-31	5.26	1.43e-07	0.75	FALSE
BLA	Ubox5	intron excision ratio	chr3_117817986_117819882	0.86	816	0.51	4.8e-31	-5.26	1.43e-07	0.75	FALSE
BLA	Ubox5	intron excision ratio	chr3_117820001_117847621	0.13	1	0.07	1.3e-04	5.2	1.98e-07	0.12	FALSE
BLA	Bcl2l11	mRNA stability	Bcl2l11	0.07	1	0.04	2.5e-03	5.43	5.63e-08	0.07	FALSE
BLA	Vinac1	mRNA stability	Vinac1	0.16	1	0.11	3.0e-06	5.3	1.16e-07	0.47	FALSE
Brain	Snrpb	alternative polyA	NM_134358.1	0.11	11	0.13	9.7e-12	5.34	9.23e-08	0.44	FALSE
Brain	Snrpb	alternative polyA	XM_039104198.1	0.11	13	0.13	8.2e-12	-5.32	1.01e-07	0.43	FALSE
Brain	LOC103691888	gene expression	LOC103691888	0.27	25	0.26	4.8e-24	-5.23	1.67e-07	0.55	FALSE
Brain	Mrps26	gene expression	Mrps26	0.2	1	0.17	1.9e-15	5.2	1.97e-07	0.56	FALSE
Brain	Pced1a	gene expression	Pced1a	0.05	3	0.05	1.1e-05	5.21	1.86e-07	0.54	FALSE
Brain	Ttl	gene expression	Ttl	0.06	1	0.03	1.0e-03	-5.2	2.04e-07	0.12	FALSE
Brain	Ubox5	gene expression	Ubox5	0.15	1	0.15	1.5e-13	5.22	1.78e-07	0.62	FALSE
Brain	Vinac1	gene expression	Vinac1	0.05	1	0.03	6.1e-04	-5.24	1.60e-07	0.15	FALSE
Brain	Pced1a	isoform ratio	NM_001399285.1	0.07	2	0.09	2.0e-08	-5.22	1.81e-07	0.53	FALSE
Brain	Snrpb	isoform ratio	NM_134358.1	0.14	17	0.14	6.7e-13	5.35	8.76e-08	0.49	FALSE
Brain	Snrpb	isoform ratio	XM_039104198.1	0.14	16	0.13	2.2e-12	-5.38	7.56e-08	0.49	FALSE
Brain	Vinac1	isoform ratio	XM_039106562.1	0.06	1	0.04	1.6e-04	-5.29	1.25e-07	0.4	FALSE
Brain	Vinac1	isoform ratio	XM_039106563.1	0.06	1	0.04	2.5e-04	5.29	1.25e-07	0.4	FALSE
Brain	LOC102549592	intron excision ratio	chr3_116408104_116408408	0.03	1	0.02	2.9e-03	-5.24	1.60e-07	0.07	FALSE
Brain	Ubox5	intron excision ratio	chr3_117817986_117819831	0.93	71	0.77	7.8e-110	-5.39	6.96e-08	0.8	FALSE
Brain	Ubox5	intron excision ratio	chr3_117817986_117819882	0.94	78	0.76	2.4e-106	5.39	7.04e-08	0.8	FALSE
Brain	Zc3h8	intron excision ratio	chr3_116190795_116192573	0.14	1	0.12	1.3e-11	5.4	6.80e-08	0.85	FALSE
Brain	Zc3h8	intron excision ratio	chr3_116190795_116193598	0.1	35	0.08	4.7e-08	-5.28	1.31e-07	0.72	FALSE
Brain	Ebf4	mRNA stability	Ebf4	0.19	1	0.2	4.7e-18	-5.26	1.42e-07	0.6	FALSE
Brain	Vps16	mRNA stability	Vps16	0.04	1	0.03	5.7e-04	-5.39	7.13e-08	0.06	FALSE
Eye	Ubox5	intron excision ratio	chr3_117817986_117819831	0.86	1	0.39	4.4e-07	-5.17	2.28e-07	0.08	FALSE
Eye	Ubox5	intron excision ratio	chr3_117817986_117819882	0.85	1	0.39	5.4e-07	5.17	2.28e-07	0.08	FALSE
IL	Mall	gene expression	Mall	0.45	1	0.19	2.0e-05	5.31	1.07e-07	0.16	FALSE
LHb	LOC100909998	gene expression	LOC100909998	0.28	1	0.06	1.5e-02	5.34	9.32e-08	0.06	FALSE
LHb	Tgm6	gene expression	Tgm6	0.24	2	0.17	7.3e-05	-5.2	1.96e-07	0.37	FALSE
Liver	Snrpb	alternative polyA	NM_134358.1	0.14	14	0.14	8.2e-15	5.42	5.94e-08	0.44	FALSE
Liver	Snrpb	alternative polyA	XM_039104198.1	0.16	20	0.15	5.6e-16	-5.32	1.01e-07	0.49	FALSE
Liver	Fastkd5	gene expression	Fastkd5	0.02	1	0.01	2.4e-02	-5.39	7.13e-08	0.03	FALSE
Liver	LOC108350462	gene expression	LOC108350462	0.02	1	0.01	9.6e-03	-5.39	7.13e-08	0.03	FALSE
Liver	Snrpb	gene expression	Snrpb	0.04	1	0.02	1.9e-03	5.2	1.94e-07	0.04	FALSE
Liver	Zc3h8	isoform ratio	XM_039104994.1	0.04	1	0.02	2.5e-03	5.25	1.49e-07	0.04	FALSE
Liver	Ubox5	intron excision ratio	chr3_117816374_117817892	0.02	1	0.02	4.8e-03	-5.2	1.97e-07	0.03	FALSE
Liver	Ubox5	intron excision ratio	chr3_117817986_117819831	0.68	1	0.35	1.1e-40	-5.32	1.04e-07	0.73	FALSE
Liver	Ubox5	intron excision ratio	chr3_117817986_117819882	0.67	1	0.35	1.8e-40	5.32	1.04e-07	0.73	FALSE
Liver	Zc3h8	intron excision ratio	chr3_116190795_116192573	0.04	30	0.02	6.3e-03	5.22	1.84e-07	0.54	FALSE
Liver	Zc3h8	intron excision ratio	chr3_116190795_116193598	0.08	1	0.04	5.8e-05	-5.23	1.70e-07	0.22	FALSE
Liver	Pced1a	mRNA stability	Pced1a	0.02	1	0.01	1.1e-02	5.2	1.95e-07	0.03	FALSE
NAcc	Zc3h6	alternative polyA	NM_001107772.1	0.24	25	0.18	6.8e-20	-5.25	1.50e-07	0.72	FALSE
NAcc	Zc3h6	alternative polyA	XM_039104996.1	0.24	28	0.18	8.0e-20	5.24	1.59e-07	0.71	FALSE
NAcc	Zc3h6	alternative polyA	NM_001107772.1	0.23	48	0.17	1.9e-19	-5.26	1.44e-07	0.72	FALSE
NAcc	Zc3h6	alternative polyA	XM_006234999.4	0.23	34	0.17	9.3e-20	5.25	1.56e-07	0.71	FALSE
NAcc	Vinac1	alternative TSS	XM_039106562.1	0.04	1	0.03	2.0e-04	-5.29	1.25e-07	0.16	FALSE
NAcc	Mrps26	gene expression	Mrps26	0.76	11	0.13	1.0e-14	-5.33	1.01e-07	0.76	FALSE
NAcc	Pced1a	gene expression	Pced1a	0.14	1	0.08	4.1e-09	-5.19	2.07e-07	0.53	FALSE
NAcc	Ptpra	gene expression	Ptpra	0.07	18	0.08	1.0e-09	-5.2	2.04e-07	0.44	FALSE
NAcc	Slc20a1	gene expression	Slc20a1	0.05	1	0.04	4.8e-05	5.21	1.93e-07	0.45	FALSE
NAcc	Zc3h6	gene expression	Zc3h6	0.2	1	0.04	5.8e-06	-5.35	8.87e-08	0.75	FALSE
NAcc	Zc3h6	isoform ratio	XM_039104996.1	0.24	1	0.11	1.0e-12	5.3	1.16e-07	0.77	FALSE
NAcc	Fastkd5	intron excision ratio	chr3_117820001_117847621	0.02	816	0.01	7.1e-03	-5.18	2.18e-07	0.5	FALSE
NAcc	Ubox5	intron excision ratio	chr3_117817986_117819831	0.49	816	0.53	1.7e-71	5.22	1.82e-07	0.58	FALSE
NAcc	Ubox5	intron excision ratio	chr3_117820001_117847621	0.02	816	0.01	7.1e-03	-5.18	2.18e-07	0.5	FALSE
NAcc	Zc3h8	intron excision ratio	chr3_116190795_116193598	0.11	1	0.1	2.3e-11	-5.3	1.16e-07	0.77	FALSE
NAcc	Zc3h8	mRNA stability	Zc3h8	0.04	1	0.02	2.2e-03	5.4	6.80e-08	0.09	FALSE
OFC	Pdyn	gene expression	Pdyn	0.56	421	0.47	1.1e-12	-5.42	6.07e-08	0.48	FALSE
OFC	Zc3h8	intron excision ratio	chr3_116190795_116192573	0.31	1	0.19	2.4e-05	5.23	1.71e-07	0.08	FALSE
OFC	Zc3h8	intron excision ratio	chr3_116190795_116193598	0.32	1	0.2	2.1e-05	-5.23	1.71e-07	0.08	FALSE
OFC	Ebf4	mRNA stability	Ebf4	0.18	1	0.09	3.9e-03	-5.2	1.99e-07	0.05	FALSE
OFC	Pced1a	mRNA stability	Pced1a	0.22	82	0.14	2.8e-04	5.19	2.14e-07	0.41	FALSE
PL	LOC108350462	alternative polyA	XR_005502459.1	0.03	1	0.02	1.6e-03	5.39	7.13e-08	0.06	FALSE
PL	Pced1a	alternative polyA	XM_039104578.1	0.69	46	0.26	5.6e-29	5.2	1.98e-07	0.54	FALSE
PL	Zc3h6	alternative polyA	NM_001107772.1	0.11	1	0.09	8.6e-10	5.28	1.27e-07	0.76	FALSE
PL	Zc3h6	alternative polyA	XM_006234999.4	0.1	1	0.09	1.0e-09	-5.28	1.27e-07	0.76	FALSE
PL	Zc3h6	alternative TSS	NM_001107772.1	0.16	17	0.09	1.1e-09	5.33	9.71e-08	0.72	FALSE
PL	Zc3h6	alternative TSS	XM_039104996.1	0.06	1	0.04	2.1e-05	5.3	1.16e-07	0.46	FALSE
PL	Cpxm1	gene expression	Cpxm1	0.02	1	0.03	6.8e-04	-5.2	1.96e-07	0.04	FALSE
PL	LOC103691888	gene expression	LOC103691888	0.31	951	0.15	1.1e-15	5.22	1.81e-07	0.6	FALSE
PL	Mrps26	gene expression	Mrps26	0.26	19	0.13	3.6e-14	5.26	1.43e-07	0.67	FALSE
PL	Pced1a	gene expression	Pced1a	0.12	4	0.1	4.5e-11	5.42	5.88e-08	0.65	FALSE
PL	Ubox5	gene expression	Ubox5	0.12	816	0.15	6.2e-16	-5.18	2.20e-07	0.56	FALSE
PL	Zc3h6	gene expression	Zc3h6	0.04	1	0.01	7.8e-03	-5.35	8.87e-08	0.16	FALSE
PL	Pced1a	isoform ratio	NM_001399285.1	0.07	7	0.06	2.8e-07	-5.22	1.81e-07	0.51	FALSE
PL	Pced1a	isoform ratio	XM_039104578.1	0.55	102	0.29	1.3e-31	-5.28	1.26e-07	0.54	FALSE
PL	Cpxm1	intron excision ratio	chr3_117601886_117617729	0.03	1	0.03	1.2e-04	-5.39	7.13e-08	0.23	FALSE
PL	Pced1a	intron excision ratio	chr3_117601886_117617729	0.03	1	0.03	1.2e-04	-5.39	7.13e-08	0.24	FALSE
PL	Ubox5	intron excision ratio	chr3_117817986_117819831	0.58	816	0.62	1.1e-87	5.36	8.22e-08	0.8	FALSE
PL	Ubox5	intron excision ratio	chr3_117817986_117819882	0.55	816	0.6	4.0e-83	-5.33	9.66e-08	0.79	FALSE
PL	Zc3h8	intron excision ratio	chr3_116190795_116193598	0.16	1	0.15	8.7e-16	-5.24	1.60e-07	0.71	FALSE
PL	Pced1a	mRNA stability	Pced1a	0.21	8	0.16	2.1e-17	-5.26	1.42e-07	0.54	FALSE
pVTA	Pced1a	alternative polyA	NM_001399286.1	0.14	59	0.09	8.5e-05	5.28	1.31e-07	0.51	FALSE
pVTA	Pced1a	alternative polyA	XM_039104578.1	0.15	1	0.1	4.2e-05	-5.22	1.78e-07	0.24	FALSE
pVTA	Pced1a	alternative TSS	NM_001399286.1	0.07	7	0.09	8.5e-05	5.25	1.56e-07	0.45	FALSE
pVTA	Pced1a	alternative TSS	NM_001399286.1	0.06	5	0.09	1.4e-04	-5.25	1.56e-07	0.43	FALSE
pVTA	Fbln7	gene expression	Fbln7	0.13	111	0.11	1.9e-05	5.23	1.72e-07	0.62	FALSE
pVTA	LOC103691888	gene expression	LOC103691888	0.87	1	0.14	1.6e-06	-5.52	3.45e-08	0.84	TRUE
pVTA	Mrps26	gene expression	Mrps26	0.3	57	0.19	1.7e-08	5.24	1.59e-07	0.59	FALSE
pVTA	Ptpra	gene expression	Ptpra	0.08	6	0.1	6.9e-05	5.22	1.84e-07	0.44	FALSE
pVTA	Pced1a	isoform ratio	XM_039104578.1	0.1	1	0.06	1.2e-03	-5.2	1.97e-07	0.13	FALSE
pVTA	Ubox5	intron excision ratio	chr3_117817986_117819831	0.81	76	0.65	1.9e-36	-5.26	1.41e-07	0.65	FALSE
pVTA	Ubox5	intron excision ratio	chr3_117817986_117819882	0.84	62	0.66	1.6e-37	5.27	1.40e-07	0.66	FALSE
pVTA	Pced1a	mRNA stability	Pced1a	0.11	1	0.08	3.0e-04	5.24	1.61e-07	0.08	FALSE
RMTg	Ubox5	gene expression	Ubox5	0.3	1	0.12	4.4e-04	5.22	1.82e-07	0.06	FALSE