Best TWAS P=7.88e-08 · Best GWAS P=1.32e-07 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| BLA | Ehd4 | gene expression | Ehd4 | 0.37 | 22 | 0.29 | 1.2e-15 | 5.3 | 1.18e-07 | 0.82 | FALSE |
| Liver | Mapkbp1 | gene expression | Mapkbp1 | 0.04 | 1427 | 0.01 | 7.6e-02 | -5.19 | 2.16e-07 | 0.44 | FALSE |
| NAcc | Mapkbp1 | isoform ratio | NM_001108589.1 | 0.04 | 5 | 0.03 | 9.0e-05 | 5.32 | 1.05e-07 | 0.66 | FALSE |
| NAcc | Mapkbp1 | isoform ratio | XM_006234781.4 | 0.04 | 1427 | 0.03 | 1.5e-04 | -5.37 | 7.88e-08 | 0.69 | TRUE |
| PL | Rpap1 | isoform ratio | XM_006234772.4 | 0.13 | 1454 | 0.16 | 9.5e-17 | 5.2 | 2.01e-07 | 0.72 | FALSE |
| PL | Mapkbp1 | intron excision ratio | chr3_106983571_106983761 | 0.03 | 1427 | 0.03 | 4.0e-04 | 5.28 | 1.29e-07 | 0.62 | FALSE |
| PL | Mapkbp1 | intron excision ratio | chr3_106983571_106983888 | 0.03 | 1427 | 0.03 | 1.9e-04 | -5.2 | 2.03e-07 | 0.59 | FALSE |
| PL | Pla2g4b | intron excision ratio | chr3_107004412_107006623 | 0.04 | 86 | 0.04 | 1.4e-05 | 5.36 | 8.32e-08 | 0.72 | FALSE |
| PL | Sptbn5 | intron excision ratio | chr3_107014161_107016922 | 0.04 | 1391 | 0.05 | 6.5e-06 | -5.32 | 1.06e-07 | 0.73 | FALSE |
| PL | Sptbn5 | intron excision ratio | chr3_107017537_107018049 | 0.07 | 74 | 0.07 | 1.5e-08 | -5.31 | 1.11e-07 | 0.82 | FALSE |
| PL | Ehd4 | mRNA stability | Ehd4 | 0.03 | 1410 | 0.03 | 4.1e-04 | 5.2 | 1.97e-07 | 0.5 | FALSE |