chr1:176,058,408-178,603,594

Trait: Tibialis anterior weight

Best TWAS P=1.13e-08 · Best GWAS P=1.01e-08 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Lcmt1 gene expression ENSRNOG00000014565 0.12 1 0.07 1.9e-08 -5.43 5.77e-08 0.58 FALSE
Adipose Lcmt1 mRNA stability ENSRNOG00000014565 0.09 1 0.04 4.5e-05 -5.71 1.13e-08 0.41 TRUE
Brain Tnrc6a gene expression ENSRNOG00000024737 0.23 23 0.14 8.9e-13 5.61 1.97e-08 0.82 FALSE
Brain Lcmt1 intron excision ratio chr1:177952634:177957883 0.04 1774 0.03 3.8e-04 -5.33 9.70e-08 0.61 FALSE
IL Tnrc6a gene expression ENSRNOG00000024737 0.19 1 0.12 8.2e-04 5.1 3.44e-07 0.05 FALSE
LHb Chp2 gene expression ENSRNOG00000019112 0.57 1 0.24 1.7e-06 5.12 3.02e-07 0.29 FALSE
Liver Rbbp6 gene expression ENSRNOG00000012806 0.05 1 0.01 1.0e-02 5.15 2.55e-07 0.03 FALSE
Liver Lcmt1 gene expression ENSRNOG00000014565 0.05 1774 -0 3.7e-01 -5.39 7.01e-08 0.27 FALSE
Liver Lcmt1 intron excision ratio chr1:177951469:177952543 0.27 188 0.14 9.6e-16 5.25 1.55e-07 0.63 FALSE
Liver Lcmt1 intron excision ratio chr1:177952440:177952543 0.26 1774 0.14 1.7e-15 -5.38 7.34e-08 0.63 FALSE
Liver Lcmt1 intron excision ratio chr1:177957980:177959889 0.05 1 0 1.8e-01 5.11 3.17e-07 0.03 FALSE
Liver Lcmt1 mRNA stability ENSRNOG00000014565 0.21 141 0.15 7.4e-16 5.47 4.52e-08 0.64 FALSE
NAcc Lcmt1 gene expression ENSRNOG00000014565 0.2 31 0.2 4.7e-15 -5.4 6.67e-08 0.69 FALSE
OFC Lcmt1 gene expression ENSRNOG00000014565 0.16 1769 0.06 1.6e-02 -5.22 1.79e-07 0.38 FALSE
PL Cacng3 gene expression ENSRNOG00000012362 0.12 1921 0.1 5.9e-08 -5.29 1.20e-07 0.34 FALSE
PL Lcmt1 gene expression ENSRNOG00000014565 0.06 1 0.06 2.4e-05 -5.41 6.25e-08 0.13 FALSE
PL Tnrc6a gene expression ENSRNOG00000024737 0.1 1 0.09 3.8e-07 5.47 4.38e-08 0.7 FALSE