Best TWAS P=1.11e-08 · Best GWAS P=1.78e-08 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Vps35l | gene expression | ENSRNOG00000016063 | 0.05 | 1 | 0.03 | 6.5e-04 | -5.51 | 3.52e-08 | 0.18 | FALSE |
Adipose | Iqck | gene expression | ENSRNOG00000036758 | 0.38 | 16 | 0.28 | 1.0e-31 | -5.15 | 2.63e-07 | 0.68 | TRUE |
Adipose | Vps35l | mRNA stability | ENSRNOG00000016063 | 0.06 | 2623 | 0.01 | 3.4e-02 | -5.35 | 8.63e-08 | 0.54 | FALSE |
Brain | Knop1 | gene expression | ENSRNOG00000070112 | 0.07 | 1 | 0.06 | 3.3e-06 | 5.3 | 1.18e-07 | 0.4 | FALSE |
Eye | Ccp110 | gene expression | ENSRNOG00000027405 | 0.55 | 5 | 0.08 | 2.3e-02 | 5.12 | 3.00e-07 | 0.33 | TRUE |
IL | Gpr139 | gene expression | ENSRNOG00000023863 | 0.22 | 3 | 0.04 | 4.0e-02 | 5.48 | 4.27e-08 | 0.28 | FALSE |
LHb | Knop1 | gene expression | ENSRNOG00000070112 | 0.21 | 1 | 0.03 | 7.4e-02 | 5.37 | 8.01e-08 | 0.05 | FALSE |
Liver | Rps15a | isoform ratio | ENSRNOT00000092282 | 0.24 | 57 | 0.14 | 1.3e-15 | -5.4 | 6.69e-08 | 0.67 | FALSE |
Liver | Rps15a | isoform ratio | ENSRNOT00000092513 | 0.25 | 56 | 0.15 | 4.6e-16 | 5.37 | 7.95e-08 | 0.65 | FALSE |
Liver | Rps15a | intron excision ratio | chr1:172426036:172426864 | 0.16 | 1 | 0.09 | 2.9e-10 | 5.3 | 1.13e-07 | 0.67 | FALSE |
Liver | Rps15a | intron excision ratio | chr1:172426036:172426971 | 0.18 | 33 | 0.11 | 1.3e-12 | -5.36 | 8.11e-08 | 0.64 | FALSE |
Liver | RGD1559600 | intron excision ratio | chr1:173974388:173985543 | 0.51 | 1 | 0.01 | 1.3e-02 | 5.55 | 2.79e-08 | 0.11 | FALSE |
Liver | RGD1559600 | intron excision ratio | chr1:173974388:173987413 | 0.53 | 2 | 0.01 | 3.5e-02 | -5.71 | 1.11e-08 | 0.41 | TRUE |
NAcc | Ccp110 | isoform ratio | ENSRNOT00000037870 | 0.04 | 2570 | 0.04 | 4.9e-04 | 5.21 | 1.92e-07 | 0.61 | FALSE |
NAcc | Ccp110 | intron excision ratio | chr1:173066008:173068203 | 0.06 | 1 | 0.07 | 9.6e-06 | 5.36 | 8.26e-08 | 0.36 | FALSE |
NAcc | Ccp110 | intron excision ratio | chr1:173066008:173071013 | 0.06 | 1 | 0.07 | 6.9e-06 | 5.36 | 8.26e-08 | 0.42 | FALSE |
OFC | Tmc7 | gene expression | ENSRNOG00000016679 | 0.29 | 1 | 0.14 | 4.3e-04 | 5.39 | 6.93e-08 | 0.06 | FALSE |
OFC | Coq7 | mRNA stability | ENSRNOG00000017012 | 0.26 | 13 | 0.09 | 4.0e-03 | -5.54 | 2.99e-08 | 0.41 | TRUE |
PL | Rps15a | alternative TSS | ENSRNOT00000092282 | 0.03 | 1 | 0.05 | 7.6e-05 | -5.11 | 3.14e-07 | 0.05 | TRUE |
PL | Gpr139 | gene expression | ENSRNOG00000023863 | 0.03 | 1 | 0.02 | 1.0e-02 | 5.44 | 5.38e-08 | 0.04 | TRUE |
PL | Knop1 | gene expression | ENSRNOG00000070112 | 0.1 | 2558 | 0.07 | 3.4e-06 | 5.19 | 2.13e-07 | 0.65 | FALSE |
PL | Eri2 | isoform ratio | ENSRNOT00000119035 | 0.08 | 7 | 0.06 | 3.8e-05 | 5.45 | 5.07e-08 | 0.62 | FALSE |
PL | Tmc7 | mRNA stability | ENSRNOG00000016679 | 0.07 | 1 | 0.07 | 7.9e-06 | 5.5 | 3.84e-08 | 0.65 | FALSE |