Best TWAS P=1.222696e-07 · Best GWAS P=6.545875e-08 conditioned to 1
| # | Tissue | Gene | Modality | RNA phenotype | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NAcc2 | Adat2 | intron excision ratio | chr1:7954734:7958298 | 0.13 | 0.12 | top1 | 1 | 0.12 | 6.9e-07 | 5.3 | 5.3 | 1.2e-07 | 0.93 | 0.06 | 0.93 | TRUE |
h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.