chr10:56,067,111-58,495,301

Trait: Parametrial fat weight

Best TWAS P=1.92e-08 · Best GWAS P=3.51e-08 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Cyb5d2 alternative TSS ENSRNOT00000036942 0.04 1 0.02 2.3e-03 -5.5 3.74e-08 0.06 FALSE
Adipose Cyb5d2 alternative TSS ENSRNOT00000097276 0.04 1 0.02 2.8e-03 5.5 3.74e-08 0.06 FALSE
Adipose Fbxo39 gene expression ENSRNOG00000014953 0.1 1 0.07 2.4e-08 -5.16 2.52e-07 0.48 FALSE
Adipose Tekt1 gene expression ENSRNOG00000014973 0.04 1415 0.03 3.5e-04 5.47 4.51e-08 0.6 FALSE
Adipose Spns3 gene expression ENSRNOG00000015873 0.04 1252 0.03 7.4e-04 5.5 3.76e-08 0.57 FALSE
Adipose Tax1bp3 gene expression ENSRNOG00000019357 0.19 1 0.13 6.3e-14 5.51 3.65e-08 0.89 FALSE
Adipose Cyb5d2 gene expression ENSRNOG00000024553 0.03 1 0.02 1.8e-03 -5.24 1.64e-07 0.03 FALSE
Adipose Xaf1 gene expression ENSRNOG00000037371 0.06 1555 0.04 5.7e-05 -5.47 4.51e-08 0.65 FALSE
Adipose Atp2a3 isoform ratio ENSRNOT00000064840 0.03 1 0.02 1.6e-03 5.51 3.51e-08 0.05 FALSE
Adipose Xaf1 isoform ratio ENSRNOT00000118013 0.03 1 0.01 1.8e-02 -5.14 2.76e-07 0.03 FALSE
Adipose Ankfy1 mRNA stability ENSRNOG00000016212 0.12 1 0.09 7.9e-10 -5.3 1.17e-07 0.63 FALSE
Adipose P2rx5 mRNA stability ENSRNOG00000019208 0.08 2 0.05 5.8e-06 5.62 1.92e-08 0.8 FALSE
Adipose Cyb5d2 mRNA stability ENSRNOG00000024553 0.09 1030 0.05 2.0e-06 5.45 5.16e-08 0.68 FALSE
Adipose ENSRNOG00000067475 mRNA stability ENSRNOG00000067475 0.05 1702 0.04 4.6e-05 5.29 1.24e-07 0.57 FALSE
BLA Xaf1 alternative polyA ENSRNOT00000056551 0.12 1 0.09 1.6e-05 5.38 7.44e-08 0.26 FALSE
BLA Xaf1 alternative polyA ENSRNOT00000118013 0.12 1 0.09 1.1e-05 -5.38 7.44e-08 0.3 FALSE
BLA Fbxo39 gene expression ENSRNOG00000014953 0.07 1 0.04 2.2e-03 -5.13 2.86e-07 0.04 FALSE
BLA Tekt1 gene expression ENSRNOG00000014973 0.07 1415 0.03 1.1e-02 5.34 9.10e-08 0.36 FALSE
BLA Smtnl2 gene expression ENSRNOG00000015157 0.07 1373 0.02 4.0e-02 5.4 6.53e-08 0.33 FALSE
BLA Atp2a3 gene expression ENSRNOG00000017912 0.14 1 0.08 6.3e-05 5.5 3.74e-08 0.18 FALSE
BLA Camkk1 gene expression ENSRNOG00000018242 0.14 4 0.03 8.3e-03 -5.4 6.68e-08 0.42 FALSE
BLA Zzef1 gene expression ENSRNOG00000024535 0.16 1 0.11 1.1e-06 5.24 1.64e-07 0.31 FALSE
BLA Xaf1 isoform ratio ENSRNOT00000056551 0.1 1 0.06 4.6e-04 5.38 7.44e-08 0.08 FALSE
BLA Xaf1 isoform ratio ENSRNOT00000118013 0.13 1 0.09 1.4e-05 -5.38 7.44e-08 0.34 FALSE
BLA Cyb5d2 intron excision ratio chr10:57407529:57412543 0.08 1 0.05 9.5e-04 -5.38 7.44e-08 0.05 FALSE
Brain Xaf1 alternative polyA ENSRNOT00000056551 0.06 1 0.05 3.0e-05 5.3 1.18e-07 0.37 FALSE
Brain Xaf1 alternative polyA ENSRNOT00000118013 0.06 1 0.05 4.4e-05 -5.3 1.18e-07 0.32 FALSE
Brain RGD1304728 gene expression ENSRNOG00000014027 0.23 20 0.24 1.8e-22 -5.37 7.66e-08 0.66 FALSE
Brain Spns3 gene expression ENSRNOG00000015873 0.04 1 0.04 1.5e-04 5.28 1.30e-07 0.07 FALSE
Brain Ankfy1 gene expression ENSRNOG00000016212 0.09 1 0.09 5.6e-09 -5.43 5.57e-08 0.77 FALSE
Brain Xaf1 isoform ratio ENSRNOT00000056551 0.07 1 0.04 8.9e-05 5.3 1.18e-07 0.17 FALSE
Brain Xaf1 isoform ratio ENSRNOT00000118013 0.08 1 0.06 7.1e-06 -5.3 1.18e-07 0.53 FALSE
Brain Cyb5d2 intron excision ratio chr10:57400881:57407389 0.03 7 0.04 2.1e-04 -5.37 8.04e-08 0.7 FALSE
Brain Pitpnm3 mRNA stability ENSRNOG00000008323 0.03 1 0.01 5.4e-02 5.3 1.18e-07 0.04 FALSE
Brain Spns2 mRNA stability ENSRNOG00000057040 0.03 1 0.02 2.7e-03 5.22 1.83e-07 0.04 FALSE
Brain ENSRNOG00000067475 mRNA stability ENSRNOG00000067475 0.03 1703 0.02 2.4e-03 5.53 3.13e-08 0.58 FALSE
Eye Ankfy1 gene expression ENSRNOG00000016212 0.29 1 0.07 3.3e-02 -5.3 1.18e-07 0.06 FALSE
IL Tekt1 gene expression ENSRNOG00000014973 0.22 1407 0.06 1.5e-02 5.5 3.91e-08 0.29 FALSE
IL Camkk1 gene expression ENSRNOG00000018242 0.25 1 0.06 1.3e-02 -5.32 1.03e-07 0.06 FALSE
Liver RGD1304728 alternative polyA ENSRNOT00000110799 0.21 1 0.13 2.8e-14 5.3 1.17e-07 0.66 FALSE
Liver RGD1304728 alternative polyA ENSRNOT00000115682 0.04 1 0.02 3.4e-03 -5.22 1.83e-07 0.04 FALSE
Liver Slc13a5 gene expression ENSRNOG00000014870 0.37 1 0.22 1.6e-23 -5.3 1.17e-07 0.66 FALSE
Liver Cyb5d2 gene expression ENSRNOG00000024553 0.2 1030 0.14 3.9e-15 -5.62 1.92e-08 0.75 TRUE
Liver Spns2 gene expression ENSRNOG00000057040 0.02 1 0.01 1.1e-02 -5.36 8.34e-08 0.03 FALSE
Liver Ube2g1 intron excision ratio chr10:57226312:57282204 0.03 1 0.02 2.1e-03 5.3 1.18e-07 0.03 FALSE
Liver RGD1304728 intron excision ratio chr10:56785576:56788896 0.09 195 0.03 1.7e-04 5.58 2.34e-08 0.64 FALSE
NAcc RGD1304728 gene expression ENSRNOG00000014027 0.05 1 0.04 3.9e-04 -5.24 1.64e-07 0.04 FALSE
NAcc Tax1bp3 gene expression ENSRNOG00000019357 0.08 1139 0.02 1.5e-02 5.23 1.70e-07 0.59 FALSE
PL RGD1304728 gene expression ENSRNOG00000014027 0.15 69 0.11 1.9e-08 -5.41 6.33e-08 0.65 FALSE
PL Tekt1 gene expression ENSRNOG00000014973 0.06 1 0.05 1.6e-04 5.32 1.02e-07 0.07 FALSE
PL Camkk1 gene expression ENSRNOG00000018242 0.37 3 0.24 4.7e-18 -5.39 7.05e-08 0.81 FALSE
PL Camkk1 intron excision ratio chr10:57644145:57644236 0.11 1 0.11 8.5e-09 5.31 1.11e-07 0.69 FALSE
PL ENSRNOG00000067475 mRNA stability ENSRNOG00000067475 0.06 1 0.03 1.3e-03 5.24 1.64e-07 0.05 FALSE