Best TWAS P = 7.29e-09 · Best GWAS P= 2.68e-07 conditioned to 3.96e-01
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | LOC102550734 | gene expression | LOC102550734 | 0.12 | 147 | 0.12 | 4.1e-13 | 5.28 | 1.31e-07 | 0.74 | FALSE |
| Adipose | Trpc1 | gene expression | Trpc1 | 0.07 | 141 | 0.05 | 4.1e-06 | 5.77 | 7.82e-09 | 0.74 | FALSE |
| Brain | Atp1b3 | gene expression | Atp1b3 | 0.07 | 27 | 0.05 | 1.4e-05 | 5.78 | 7.29e-09 | 0.66 | TRUE |
| Brain | Rnf7 | gene expression | Rnf7 | 0.05 | 1935 | 0.02 | 4.0e-03 | 5.54 | 3.03e-08 | 0.64 | FALSE |
| Brain | Atp1b3 | intron excision ratio | chr8_105802082_105820898 | 0.05 | 1766 | 0.05 | 1.8e-05 | -5.32 | 1.04e-07 | 0.64 | FALSE |
| NAcc | Rnf7 | gene expression | Rnf7 | 0.04 | 8 | 0.02 | 2.7e-04 | 5.43 | 5.57e-08 | 0.33 | FALSE |
| pVTA | LOC134480217 | alternative polyA | XR_010054457.1 | 0.09 | 1935 | 0.06 | 2.1e-05 | 5.39 | 7.20e-08 | 0.15 | FALSE |
| pVTA | LOC134480217 | alternative polyA | XR_010054458.1 | 0.1 | 1935 | 0.06 | 1.0e-05 | -5.5 | 3.75e-08 | 0.19 | FALSE |
| pVTA | Rnf7 | isoform ratio | XM_063265223.1 | 0.06 | 1935 | 0.02 | 5.7e-03 | -5.49 | 4.13e-08 | 0.11 | FALSE |