chr8:117,463,629-120,978,811

Trait: Body weight

Best TWAS P = 1.92e-10 · Best GWAS P= 1.40e-08 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Mlh1 alternative polyA NM_031053.2 0.02 1 0.01 9.2e-03 5.4 6.55e-08 0.06 FALSE
Adipose Mlh1 alternative polyA XM_063266207.1 0.02 1 0.01 8.7e-03 -5.4 6.55e-08 0.06 FALSE
Adipose Mlh1 alternative polyA NM_031053.2 0.02 1 0.01 1.1e-02 5.4 6.55e-08 0.06 FALSE
Adipose Mlh1 alternative polyA XM_063266207.1 0.02 1 0.01 9.9e-03 -5.4 6.55e-08 0.06 FALSE
Adipose Als2cl gene expression Als2cl 0.24 2807 0.01 1.8e-02 5.62 1.86e-08 0.25 FALSE
Adipose Ccrl2 gene expression Ccrl2 0.03 1 0.01 8.4e-03 -5.37 7.88e-08 0.03 FALSE
Adipose Mlh1 isoform ratio XM_063266207.1 0.03 1 0.01 9.7e-03 -5.43 5.63e-08 0.06 FALSE
BLA Lrrfip2 gene expression Lrrfip2 0.07 1 0.07 2.0e-04 -5.52 3.38e-08 0.17 FALSE
Brain Pth1r alternative TSS XM_006244002.4 0.08 163 0.05 4.0e-05 -5.38 7.37e-08 0.41 FALSE
Brain Nbeal2 gene expression Nbeal2 0.61 2768 0.32 7.6e-31 5.21 1.85e-07 0.48 FALSE
Brain Ccdc12 intron excision ratio chr8_119547056_119561689 0.05 18 0.05 1.1e-05 -5.27 1.39e-07 0.23 FALSE
Brain Mlh1 intron excision ratio chr8_120095325_120096995 0.02 1 0.03 8.1e-04 5.46 4.75e-08 0.05 FALSE
Brain Trank1 intron excision ratio chr8_120219593_120222781 0.06 1 0.06 1.4e-06 -5.29 1.26e-07 0.39 TRUE
Brain Trank1 intron excision ratio chr8_120221634_120222781 0.02 1 0.02 6.2e-03 5.28 1.29e-07 0.03 FALSE
IC Kif9 alternative polyA NM_001192000.2 0.47 1 0.17 8.2e-08 -5.27 1.38e-07 0.56 FALSE
IC Kif9 alternative polyA XM_006243994.5 0.52 1 0.18 5.7e-08 5.27 1.38e-07 0.58 FALSE
IC Epm2aip1 gene expression Epm2aip1 0.13 39 0.15 1.1e-06 -5.26 1.43e-07 0.34 FALSE
IC Mlh1 gene expression Mlh1 0.48 27 0.51 1.8e-24 5.37 7.81e-08 0.31 FALSE
IL Dclk3 gene expression Dclk3 0.29 81 0.17 8.7e-05 -5.25 1.53e-07 0.42 FALSE
IL Mlh1 gene expression Mlh1 0.55 678 0.44 8.5e-12 5.27 1.34e-07 0.4 FALSE
IL Mlh1 mRNA stability Mlh1 0.24 1 0.1 2.1e-03 5.4 6.55e-08 0.05 FALSE
LHb Ccdc12 gene expression Ccdc12 0.49 2646 0.16 1.1e-04 -5.7 1.20e-08 0.34 TRUE
Liver Pth1r alternative polyA XM_039082024.2 0.06 31 0.05 2.4e-06 -5.31 1.12e-07 0.37 FALSE
Liver Pth1r alternative polyA XM_006243999.4 0.06 25 0.05 1.7e-06 -5.24 1.57e-07 0.37 FALSE
Liver Mlh1 gene expression Mlh1 0.55 930 0.6 2.0e-84 5.34 9.55e-08 0.48 FALSE
Liver Mst1 isoform ratio NM_024352.1 0.07 224 0.06 1.2e-07 -6.37 1.92e-10 0 TRUE
Liver Pth1r isoform ratio NM_020073.2 0.07 12 0.07 3.9e-08 5.21 1.88e-07 0.4 FALSE
Liver Mlh1 mRNA stability Mlh1 0.02 7 0.02 1.7e-03 5.32 1.01e-07 0.4 FALSE
Liver Pth1r mRNA stability Pth1r 0.05 1 0.03 6.2e-04 5.37 7.88e-08 0.15 FALSE
Liver Rtp3 mRNA stability Rtp3 0.03 1 0.02 5.4e-03 -5.48 4.37e-08 0.05 FALSE
NAcc Lrrfip2 gene expression Lrrfip2 0.09 92 0.14 7.2e-21 -5.23 1.67e-07 0.52 FALSE
NAcc Trank1 gene expression Trank1 0.02 1 0.03 1.1e-05 5.38 7.54e-08 0.42 FALSE
NAcc Lrrfip2 intron excision ratio chr8_119970179_119989208 0.04 9 0.05 3.8e-08 5.28 1.31e-07 0.34 FALSE
NAcc Trank1 intron excision ratio chr8_120219593_120221549 0.02 1 0.02 2.3e-04 5.29 1.25e-07 0.27 FALSE
OFC Epm2aip1 gene expression Epm2aip1 0.24 8 0.14 4.1e-04 -5.36 8.51e-08 0.36 FALSE
PL Mlh1 isoform ratio XR_005487930.2 0.04 1 0.05 3.1e-06 5.38 7.54e-08 0.5 FALSE
PL Map4 intron excision ratio chr8_118869628_118893840 0.4 148 0.03 2.6e-04 5.42 5.86e-08 0.49 FALSE
pVTA Map4 alternative TSS NM_001419954.1 0.48 81 0.12 1.6e-09 5.21 1.86e-07 0.55 FALSE
pVTA LOC102552504 intron excision ratio chr8_119957747_119958158 0.03 1 0.03 1.1e-03 5.29 1.25e-07 0.04 FALSE
pVTA LOC102552504 intron excision ratio chr8_119957747_119958652 0.03 3 0.02 7.8e-03 -5.27 1.38e-07 0.3 FALSE
RMTg Mlh1 gene expression Mlh1 0.33 1 0.29 2.5e-08 5.26 1.48e-07 0.21 FALSE