Best TWAS P=7.87e-16 · Best GWAS P=1.45e-15 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Dennd10 | gene expression | ENSRNOG00000010230 | 0.03 | 1 | 0.03 | 2.5e-04 | -6.67 | 2.54e-11 | 0.02 | FALSE |
Adipose | Prdx3 | gene expression | ENSRNOG00000010958 | 0.19 | 34 | 0.22 | 1.6e-23 | -5.56 | 2.77e-08 | 0 | FALSE |
Adipose | Grk5 | gene expression | ENSRNOG00000011439 | 0.17 | 24 | 0.22 | 8.6e-24 | 7.02 | 2.21e-12 | 0.02 | FALSE |
BLA | Rab11fip2 | gene expression | ENSRNOG00000009523 | 0.11 | 1 | 0.05 | 1.1e-03 | -5.66 | 1.47e-08 | 0.04 | TRUE |
BLA | Ces2c | gene expression | ENSRNOG00000036571 | 0.26 | 16 | 0.2 | 1.1e-10 | 6.86 | 6.79e-12 | 0.72 | FALSE |
BLA | Sfxn4 | gene expression | ENSRNOG00000036572 | 0.07 | 1 | 0.02 | 2.1e-02 | 8.06 | 7.87e-16 | 0.35 | TRUE |
BLA | Cacul1 | isoform ratio | ENSRNOT00000084760 | 0.07 | 1 | 0 | 2.4e-01 | -7.23 | 4.94e-13 | 0.04 | FALSE |
Brain | Rab11fip2 | gene expression | ENSRNOG00000009523 | 0.09 | 2 | 0.06 | 3.6e-06 | -5.78 | 7.55e-09 | 0.04 | FALSE |
Brain | Prlhr | gene expression | ENSRNOG00000009922 | 0.03 | 1906 | 0.01 | 1.4e-02 | 5.43 | 5.60e-08 | 0.29 | FALSE |
Brain | Nanos1 | gene expression | ENSRNOG00000025060 | 0.03 | 58 | 0.01 | 2.2e-02 | -7.41 | 1.23e-13 | 0.48 | FALSE |
Brain | Ces2c | gene expression | ENSRNOG00000036571 | 0.2 | 597 | 0.29 | 3.4e-27 | 6.7 | 2.03e-11 | 0.72 | FALSE |
Brain | Sfxn4 | gene expression | ENSRNOG00000036572 | 0.09 | 36 | 0.09 | 2.2e-08 | 5.54 | 3.06e-08 | 0.01 | FALSE |
Brain | Cacul1 | isoform ratio | ENSRNOT00000050617 | 0.14 | 1 | 0.11 | 3.3e-10 | 7.67 | 1.66e-14 | 0.77 | FALSE |
Brain | Cacul1 | isoform ratio | ENSRNOT00000084760 | 0.12 | 5 | 0.11 | 5.6e-10 | -6.87 | 6.29e-12 | 0.84 | TRUE |
Brain | Zfp950 | isoform ratio | ENSRNOT00000047883 | 0.04 | 954 | 0.05 | 9.3e-06 | 6.19 | 6.14e-10 | 0.05 | FALSE |
Brain | Cacul1 | intron excision ratio | chr1:259677583:259686255 | 0.12 | 36 | 0.1 | 1.6e-09 | 7.28 | 3.22e-13 | 0.86 | TRUE |
Eye | ENSRNOG00000065260 | gene expression | ENSRNOG00000065260 | 0.45 | 1 | 0.18 | 9.5e-04 | -7.62 | 2.49e-14 | 0.06 | FALSE |
IL | Ces2c | gene expression | ENSRNOG00000036571 | 0.35 | 1 | 0.35 | 2.3e-09 | 6.88 | 6.03e-12 | 0.7 | FALSE |
IL | Sfxn4 | gene expression | ENSRNOG00000036572 | 0.19 | 1 | 0.13 | 5.3e-04 | 6.88 | 5.98e-12 | 0.05 | FALSE |
LHb | Ces2c | gene expression | ENSRNOG00000036571 | 0.25 | 594 | 0.19 | 2.3e-05 | 6.33 | 2.37e-10 | 0.65 | FALSE |
Liver | Rab11fip2 | gene expression | ENSRNOG00000009523 | 0.03 | 2371 | 0.01 | 1.3e-02 | -5.18 | 2.22e-07 | 0.24 | TRUE |
Liver | Nanos1 | gene expression | ENSRNOG00000025060 | 0.03 | 1 | 0.02 | 1.2e-03 | -5.4 | 6.73e-08 | 0.03 | FALSE |
Liver | Zfp950 | gene expression | ENSRNOG00000032668 | 0.03 | 1 | 0.01 | 7.7e-03 | -7.55 | 4.28e-14 | 0.04 | FALSE |
Liver | Cacul1 | isoform ratio | ENSRNOT00000050617 | 0.03 | 1 | 0.02 | 1.3e-03 | 7.19 | 6.34e-13 | 0.03 | FALSE |
Liver | Cacul1 | isoform ratio | ENSRNOT00000084760 | 0.03 | 1780 | 0.02 | 4.5e-03 | -6.82 | 9.36e-12 | 0.42 | FALSE |
Liver | Cacul1 | mRNA stability | ENSRNOG00000009954 | 0.03 | 1 | 0.01 | 1.4e-02 | 7.47 | 8.19e-14 | 0.03 | FALSE |
NAcc | Prlhr | gene expression | ENSRNOG00000009922 | 0.14 | 1904 | 0.11 | 2.3e-08 | 6.93 | 4.21e-12 | 0.78 | FALSE |
NAcc | Zfp950 | gene expression | ENSRNOG00000032668 | 0.05 | 15 | 0.02 | 7.3e-03 | 6.18 | 6.40e-10 | 0.36 | FALSE |
NAcc | Ces2c | gene expression | ENSRNOG00000036571 | 0.22 | 597 | 0.22 | 5.3e-16 | 6.25 | 4.22e-10 | 0.71 | FALSE |
NAcc | Sfxn4 | gene expression | ENSRNOG00000036572 | 0.07 | 1 | 0.04 | 3.8e-04 | 7.54 | 4.62e-14 | 0.05 | FALSE |
NAcc | Cacul1 | isoform ratio | ENSRNOT00000050617 | 0.05 | 1781 | 0.05 | 9.6e-05 | 7.76 | 8.31e-15 | 0.8 | FALSE |
NAcc | Cacul1 | isoform ratio | ENSRNOT00000084760 | 0.05 | 1781 | 0.05 | 1.6e-04 | -7.78 | 7.29e-15 | 0.79 | FALSE |
OFC | Rab11fip2 | gene expression | ENSRNOG00000009523 | 0.3 | 17 | 0.27 | 5.1e-07 | -7.15 | 8.75e-13 | 0.55 | TRUE |
OFC | Cacul1 | gene expression | ENSRNOG00000009954 | 0.45 | 1782 | 0.41 | 9.5e-11 | 5.7 | 1.21e-08 | 0.5 | FALSE |
OFC | Ces2c | gene expression | ENSRNOG00000036571 | 0.38 | 1 | 0.42 | 3.6e-11 | 6.83 | 8.34e-12 | 0.76 | FALSE |
OFC | Sfxn4 | gene expression | ENSRNOG00000036572 | 0.41 | 17 | 0.26 | 7.0e-07 | 7.15 | 8.62e-13 | 0.09 | FALSE |
OFC | Rab11fip2 | mRNA stability | ENSRNOG00000009523 | 0.16 | 1 | 0.19 | 2.9e-05 | -7.07 | 1.58e-12 | 0.05 | FALSE |
PL | Rab11fip2 | gene expression | ENSRNOG00000009523 | 0.06 | 76 | 0.05 | 1.5e-04 | -7.34 | 2.11e-13 | 0.63 | FALSE |
PL | Cacul1 | gene expression | ENSRNOG00000009954 | 0.24 | 45 | 0.18 | 2.4e-13 | 5.27 | 1.39e-07 | 0 | FALSE |
PL | Ces2c | gene expression | ENSRNOG00000036571 | 0.39 | 1 | 0.38 | 3.4e-30 | 6.64 | 3.17e-11 | 0.48 | FALSE |
PL | Sfxn4 | gene expression | ENSRNOG00000036572 | 0.17 | 158 | 0.1 | 9.5e-08 | 6.22 | 4.94e-10 | 0.11 | FALSE |
PL | Cacul1 | isoform ratio | ENSRNOT00000050617 | 0.03 | 1 | 0.02 | 1.8e-02 | 8.01 | 1.13e-15 | 0.23 | FALSE |
PL | Zfp950 | intron excision ratio | chr1:260237329:260247276 | 0.03 | 954 | 0.02 | 1.2e-02 | 7.2 | 5.92e-13 | 0.5 | FALSE |