chr3:129,554,891-132,693,612

Trait: BMI with tail

Best TWAS P=3.81e-12 · Best GWAS P=1.30e-12 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Kif16b alternative polyA ENSRNOT00000118037 0.08 1 0.05 5.3e-06 5.16 2.45e-07 0.02 FALSE
Adipose Dstn gene expression ENSRNOG00000005924 0.59 1575 0.48 3.4e-60 5.57 2.50e-08 0.11 TRUE
Adipose Dtd1 gene expression ENSRNOG00000008746 0.28 19 0.15 5.0e-16 5.25 1.55e-07 0.53 FALSE
Adipose Snrpb2 mRNA stability ENSRNOG00000004967 0.04 20 0.01 1.5e-02 -6.33 2.40e-10 0.42 FALSE
Adipose Dstn mRNA stability ENSRNOG00000005924 0.83 184 0.6 1.1e-83 5.15 2.57e-07 0.1 FALSE
BLA Kif16b gene expression ENSRNOG00000004951 0.04 1 0.04 4.1e-03 6.69 2.22e-11 0.04 FALSE
BLA Snrpb2 gene expression ENSRNOG00000004967 0.05 1 0.02 4.4e-02 6.94 3.81e-12 0.05 TRUE
BLA Pcsk2 gene expression ENSRNOG00000005438 0.11 1 0.07 1.9e-04 6.36 2.03e-10 0.05 FALSE
BLA Dstn gene expression ENSRNOG00000005924 0.84 268 0.64 9.8e-44 5.76 8.18e-09 0.29 FALSE
BLA Otor gene expression ENSRNOG00000028721 0.07 1960 0.04 2.7e-03 -6.23 4.73e-10 0.26 TRUE
BLA ENSRNOG00000067833 gene expression ENSRNOG00000067833 0.09 1 0.02 3.9e-02 5.29 1.19e-07 0.06 FALSE
BLA Rbbp9 intron excision ratio chr3:131927367:131929585 0.14 1 0.07 8.2e-05 5.55 2.82e-08 0.42 FALSE
BLA Rbbp9 intron excision ratio chr3:131929308:131929585 0.13 1 0.07 7.7e-05 -5.55 2.82e-08 0.34 FALSE
BLA Rbbp9 intron excision ratio chr3:131929690:131931999 0.17 1 0.14 6.7e-08 -5.36 8.44e-08 0.63 FALSE
BLA Pcsk2 mRNA stability ENSRNOG00000005438 0.23 1 0.15 3.1e-08 -5.98 2.23e-09 0.02 FALSE
BLA Dstn mRNA stability ENSRNOG00000005924 0.45 182 0.39 2.2e-22 6.18 6.28e-10 0.61 FALSE
BLA Kat14 mRNA stability ENSRNOG00000007160 0.05 4 0.03 9.8e-03 -5.16 2.41e-07 0.23 FALSE
Brain Rrbp1 alternative TSS ENSRNOT00000055602 0.03 1597 0.03 2.1e-03 -5.12 3.08e-07 0.4 FALSE
Brain Rrbp1 alternative TSS ENSRNOT00000101060 0.03 1597 0.02 2.7e-03 5.2 1.97e-07 0.39 FALSE
Brain Snrpb2 gene expression ENSRNOG00000004967 0.06 1963 0.05 1.0e-05 5.65 1.57e-08 0.48 FALSE
Brain Pcsk2 gene expression ENSRNOG00000005438 0.38 1 0.44 3.9e-44 6.05 1.42e-09 0.03 FALSE
Brain Dstn gene expression ENSRNOG00000005924 0.72 189 0.8 3.2e-120 5.63 1.81e-08 0.1 FALSE
Brain Rrbp1 gene expression ENSRNOG00000005958 0.14 1597 0.16 4.1e-15 -5.8 6.80e-09 0.35 FALSE
Brain Sec23b gene expression ENSRNOG00000008411 0.78 128 0.8 7.8e-119 5.13 2.96e-07 0.12 FALSE
Brain Otor gene expression ENSRNOG00000028721 0.1 25 0.11 5.1e-10 -5.98 2.22e-09 0.44 FALSE
Brain Snrpb2 intron excision ratio chr3:130399307:130400989 0.03 1 0.03 5.7e-04 6.44 1.23e-10 0.03 FALSE
Brain Sec23b intron excision ratio chr3:131955920:131958981 0.3 118 0.22 3.0e-20 5.1 3.33e-07 0.22 FALSE
Brain Snrpb2 mRNA stability ENSRNOG00000004967 0.03 1963 0.01 1.3e-02 5.58 2.36e-08 0.36 FALSE
Brain Dstn mRNA stability ENSRNOG00000005924 0.71 239 0.52 1.2e-56 5.8 6.66e-09 0.1 FALSE
Eye Dstn gene expression ENSRNOG00000005924 0.77 1048 0.25 1.1e-04 5.67 1.39e-08 0.38 FALSE
Eye Sec23b gene expression ENSRNOG00000008411 0.81 19 0.29 2.1e-05 5.41 6.47e-08 0.59 FALSE
Eye Zfp133 intron excision ratio chr3:131829590:131840865 0.3 1 0.04 9.9e-02 -5.61 2.03e-08 0.06 FALSE
IL Pcsk2 gene expression ENSRNOG00000005438 0.49 1 0.21 7.5e-06 6.79 1.14e-11 0.17 FALSE
IL Dstn gene expression ENSRNOG00000005924 0.79 1574 0.39 2.0e-10 5.91 3.44e-09 0.52 FALSE
IL Dzank1 intron excision ratio chr3:131906549:131908083 0.18 1 0.1 2.0e-03 5.25 1.56e-07 0.05 FALSE
IL Dstn mRNA stability ENSRNOG00000005924 0.54 1574 0.34 4.2e-09 5.22 1.79e-07 0.5 FALSE
LHb Snrpb2 gene expression ENSRNOG00000004967 0.24 1 0.15 2.3e-04 6.71 1.97e-11 0.05 FALSE
LHb Dstn gene expression ENSRNOG00000005924 0.8 8 0.5 1.3e-13 5.87 4.30e-09 0.41 FALSE
LHb Rrbp1 gene expression ENSRNOG00000005958 0.22 1 0.21 1.0e-05 -6.12 9.40e-10 0.08 FALSE
LHb Otor gene expression ENSRNOG00000028721 0.26 5 0.01 1.7e-01 -6.56 5.34e-11 0.28 FALSE
LHb Kif16b mRNA stability ENSRNOG00000004951 0.11 6 0.03 7.3e-02 -6.43 1.24e-10 0.34 FALSE
LHb Dstn mRNA stability ENSRNOG00000005924 0.39 1 0.37 8.7e-10 5.6 2.09e-08 0.07 FALSE
Liver Kif16b alternative polyA ENSRNOT00000036273 0.18 1 0.14 6.7e-15 -6.75 1.46e-11 0.44 FALSE
Liver Kif16b alternative polyA ENSRNOT00000118037 0.18 1 0.14 1.3e-15 6.72 1.88e-11 0.38 FALSE
Liver Kif16b gene expression ENSRNOG00000004951 0.21 12 0.18 3.7e-19 -6.73 1.68e-11 0.6 FALSE
Liver Dstn gene expression ENSRNOG00000005924 0.67 1575 0.53 2.6e-69 5.58 2.36e-08 0.25 FALSE
Liver Kif16b isoform ratio ENSRNOT00000083061 0.06 1 0.04 4.7e-05 -6.69 2.23e-11 0.17 FALSE
Liver Kif16b isoform ratio ENSRNOT00000118037 0.15 2140 0.13 4.0e-14 6.73 1.67e-11 0.48 FALSE
Liver Mgme1 isoform ratio ENSRNOT00000038865 0.03 1 0.02 4.0e-03 -5.6 2.20e-08 0.03 FALSE
Liver Mgme1 isoform ratio ENSRNOT00000098696 0.03 1 0.02 3.2e-03 5.6 2.20e-08 0.04 FALSE
Liver Kif16b intron excision ratio chr3:129976371:129996958 0.03 2140 0.01 2.4e-02 -5.84 5.25e-09 0.09 FALSE
Liver Snrpb2 intron excision ratio chr3:130399307:130400989 0.04 1 0.03 3.5e-04 6.09 1.10e-09 0.03 FALSE
Liver Snrpb2 intron excision ratio chr3:130399832:130400989 0.06 1963 0.03 2.4e-04 -6.55 5.79e-11 0.42 FALSE
Liver Dstn mRNA stability ENSRNOG00000005924 0.67 1575 0.5 1.1e-63 5.56 2.63e-08 0.16 FALSE
Liver Rbbp9 mRNA stability ENSRNOG00000007972 0.04 1818 0.01 8.2e-03 5.14 2.73e-07 0.58 FALSE
NAcc Snrpb2 gene expression ENSRNOG00000004967 0.04 1 0.02 1.4e-02 6.03 1.60e-09 0.03 FALSE
NAcc Pcsk2 gene expression ENSRNOG00000005438 0.25 6 0.15 3.4e-11 5.96 2.55e-09 0.36 FALSE
NAcc Dstn gene expression ENSRNOG00000005924 0.84 1 0.7 1.4e-71 5.78 7.48e-09 0.22 FALSE
NAcc Rrbp1 gene expression ENSRNOG00000005958 0.11 1 0.11 2.0e-08 -5.55 2.81e-08 0.09 FALSE
NAcc Otor gene expression ENSRNOG00000028721 0.04 1 0.01 5.2e-02 -6.53 6.63e-11 0.04 FALSE
NAcc Rbbp9 intron excision ratio chr3:131927367:131929585 0.17 1 0.08 7.7e-07 5.11 3.19e-07 0.29 FALSE
NAcc Kif16b mRNA stability ENSRNOG00000004951 0.04 27 0.01 5.8e-02 -6.07 1.31e-09 0.46 TRUE
NAcc Dstn mRNA stability ENSRNOG00000005924 0.55 212 0.48 1.3e-39 6 2.00e-09 0.18 FALSE
OFC Pcsk2 gene expression ENSRNOG00000005438 0.62 9 0.38 5.0e-10 5.44 5.27e-08 0.57 TRUE
OFC Dstn gene expression ENSRNOG00000005924 0.82 41 0.52 1.4e-14 5.8 6.72e-09 0.43 FALSE
OFC Dstn mRNA stability ENSRNOG00000005924 0.29 1574 0.19 3.1e-05 5.69 1.27e-08 0.48 FALSE
OFC Sec23b mRNA stability ENSRNOG00000008411 0.59 1 0.42 3.9e-11 5.39 6.87e-08 0.66 FALSE
PL Snrpb2 gene expression ENSRNOG00000004967 0.12 9 0.11 1.3e-08 6.37 1.85e-10 0.39 FALSE
PL Pcsk2 gene expression ENSRNOG00000005438 0.15 80 0.18 1.0e-13 6.41 1.49e-10 0.19 FALSE
PL Dstn gene expression ENSRNOG00000005924 0.88 165 0.62 4.1e-59 5.69 1.25e-08 0.12 FALSE
PL Zfp133 gene expression ENSRNOG00000027955 0.19 1 0.12 1.3e-09 -5.14 2.73e-07 0.3 FALSE
PL Otor gene expression ENSRNOG00000028721 0.06 1972 0.05 1.0e-04 -6.38 1.74e-10 0.48 FALSE
PL Snrpb2 intron excision ratio chr3:130399307:130400989 0.05 1963 0.03 2.9e-03 6.78 1.19e-11 0.45 FALSE
PL Dzank1 intron excision ratio chr3:131906549:131907051 0.09 1 0.1 2.3e-08 -5.41 6.17e-08 0.68 FALSE
PL Kif16b mRNA stability ENSRNOG00000004951 0.11 1 0.07 5.8e-06 -5.22 1.79e-07 0.02 FALSE
PL Pcsk2 mRNA stability ENSRNOG00000005438 0.04 1 0.02 5.4e-03 -6.13 8.72e-10 0.03 FALSE
PL Dstn mRNA stability ENSRNOG00000005924 0.7 52 0.49 6.1e-42 5.66 1.53e-08 0.1 FALSE