chr3:129,261,795-132,693,612

Trait: BMI with tail

Best TWAS P=7.02e-12 · Best GWAS P=1.30e-12 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Kif16b alternative polyA XM_039105041.1 0.07 1 0.03 4.0e-04 -5.23 1.73e-07 0.02 FALSE
Adipose Dtd1 gene expression Dtd1 0.34 12 0.18 1.5e-19 5.2 2.04e-07 0.47 TRUE
Adipose Rbbp9 gene expression Rbbp9 0.11 1820 0.03 2.1e-04 5.25 1.50e-07 0.64 FALSE
Adipose Kif16b isoform ratio XM_006235108.4 0.07 2158 0.03 1.7e-04 6.24 4.43e-10 0.18 FALSE
Adipose Dstn mRNA stability Dstn 0.8 253 0.61 1.5e-84 -5.35 8.64e-08 0.1 FALSE
Adipose Dzank1 mRNA stability Dzank1 0.03 1 0 1.6e-01 -5.3 1.18e-07 0.03 FALSE
Adipose LOC120101717 mRNA stability LOC120101717 0.05 2365 0.01 9.9e-03 5.28 1.32e-07 0.36 FALSE
BLA Rbbp9 alternative polyA NM_019219.3 0.21 1 0.18 7.6e-10 5.41 6.17e-08 0.71 FALSE
BLA Rbbp9 alternative polyA XM_039104444.1 0.21 1 0.18 5.8e-10 -5.41 6.17e-08 0.71 FALSE
BLA Rbbp9 alternative polyA NM_019219.3 0.13 1 0.11 2.0e-06 5.41 6.17e-08 0.53 FALSE
BLA Rbbp9 alternative polyA XM_039104445.1 0.13 1 0.11 1.8e-06 -5.35 8.92e-08 0.46 FALSE
BLA Kif16b gene expression Kif16b 0.05 2131 0.02 1.9e-02 6.38 1.76e-10 0.42 FALSE
BLA LOC102550304 gene expression LOC102550304 0.41 1 0.33 1.4e-18 5.34 9.12e-08 0.24 FALSE
BLA Otor gene expression Otor 0.06 1963 0.01 1.2e-01 -6.35 2.15e-10 0.25 FALSE
BLA Snrpb2 gene expression Snrpb2 0.06 1954 0.01 5.2e-02 6.53 6.67e-11 0.43 FALSE
BLA Snrpb2 isoform ratio XM_039105470.1 0.09 7 0.07 1.2e-04 -5.57 2.59e-08 0.25 FALSE
BLA Rbbp9 intron excision ratio chr3_131927367_131929585 0.12 1 0.06 2.9e-04 -5.6 2.20e-08 0.14 FALSE
BLA Rbbp9 intron excision ratio chr3_131929308_131929585 0.11 1 0.06 4.1e-04 5.6 2.20e-08 0.11 FALSE
BLA Rbbp9 intron excision ratio chr3_131929690_131931999 0.21 11 0.15 2.6e-08 -5.21 1.89e-07 0.49 FALSE
BLA Dstn mRNA stability Dstn 0.44 123 0.26 2.1e-14 -5.98 2.26e-09 0.48 FALSE
BLA Pcsk2 mRNA stability Pcsk2 0.27 1 0.09 1.5e-05 5.98 2.23e-09 0.03 FALSE
Brain Rrbp1 alternative TSS XM_039106605.1 0.02 1593 0.01 1.4e-02 5.88 4.18e-09 0.52 FALSE
Brain Rrbp1 alternative TSS XM_230637.10 0.02 1593 0.02 1.2e-02 -5.88 4.02e-09 0.52 FALSE
Brain Rrbp1 alternative TSS XM_039106605.1 0.03 1 0.02 3.5e-03 -6.15 7.73e-10 0.08 FALSE
Brain Rrbp1 alternative TSS XM_230637.10 0.03 1 0.03 1.7e-03 6.15 7.73e-10 0.11 FALSE
Brain Dzank1 gene expression Dzank1 0.07 1 0.06 2.0e-06 5.22 1.81e-07 0.44 FALSE
Brain Kif16b gene expression Kif16b 0.15 93 0.1 7.0e-10 -5.81 6.34e-09 0.04 TRUE
Brain LOC102550304 gene expression LOC102550304 0.38 45 0.5 3.9e-53 5.37 7.94e-08 0.14 FALSE
Brain Otor gene expression Otor 0.1 1990 0.11 4.9e-10 -6.52 6.89e-11 0.45 FALSE
Brain Pcsk2 gene expression Pcsk2 0.38 38 0.46 1.0e-47 -6.23 4.79e-10 0.6 TRUE
Brain Rrbp1 gene expression Rrbp1 0.12 17 0.16 3.7e-15 -5.95 2.71e-09 0.29 TRUE
Brain Snrpb2 gene expression Snrpb2 0.08 50 0.08 3.2e-08 -6.29 3.13e-10 0.5 FALSE
Brain Zfp133 gene expression Zfp133 0.16 107 0.15 8.2e-14 5.2 1.95e-07 0.24 FALSE
Brain LOC120101719 intron excision ratio chr3_130525654_130567132 0.13 39 0.2 2.1e-18 6.57 4.98e-11 0.36 FALSE
Brain Snrpb2 intron excision ratio chr3_130399307_130400989 0.04 1981 0.04 2.9e-04 6.74 1.60e-11 0.44 FALSE
Brain Dstn mRNA stability Dstn 0.5 165 0.37 1.1e-35 -5.75 8.77e-09 0.11 FALSE
Eye Sec23b gene expression Sec23b 0.79 20 0.22 3.0e-04 5.48 4.37e-08 0.5 FALSE
IL LOC120101719 alternative polyA XR_005502514.1 0.24 74 0.27 4.2e-07 6.28 3.41e-10 0.46 FALSE
IL LOC120101719 alternative polyA XR_005502515.1 0.24 1 0.29 1.1e-07 -6.52 6.81e-11 0.11 FALSE
IL Rbbp9 alternative polyA NM_019219.3 0.34 31 0.14 2.6e-04 -5.47 4.57e-08 0.66 FALSE
IL Rbbp9 alternative polyA XM_039104445.1 0.34 42 0.14 2.6e-04 5.56 2.73e-08 0.67 FALSE
IL LOC120101719 gene expression LOC120101719 0.19 1 0.08 5.1e-03 -6.38 1.79e-10 0.05 FALSE
IL Pcsk2 gene expression Pcsk2 0.5 1455 0.15 2.4e-04 6.49 8.71e-11 0.58 FALSE
IL LOC120101719 isoform ratio XR_005502514.1 0.26 1 0.34 5.5e-09 6.52 6.81e-11 0.12 FALSE
IL LOC120101719 isoform ratio XR_005502515.1 0.26 1 0.34 5.4e-09 -6.52 6.81e-11 0.12 FALSE
IL Rbbp9 isoform ratio XM_039104444.1 0.24 22 0.08 6.1e-03 5.53 3.20e-08 0.56 FALSE
IL LOC120101719 intron excision ratio chr3_130525654_130567132 0.32 1 0.13 5.8e-04 6.7 2.14e-11 0.06 FALSE
IL Sec23b intron excision ratio chr3_131955920_131958981 0.41 1 0.26 5.3e-07 -5.41 6.16e-08 0.23 FALSE
IL Dstn mRNA stability Dstn 0.58 237 0.36 1.8e-09 -5.48 4.26e-08 0.51 FALSE
LHb Rbbp9 alternative polyA NM_019219.3 0.27 27 0.14 3.8e-04 -5.45 5.10e-08 0.33 FALSE
LHb Rbbp9 alternative polyA XM_039104444.1 0.27 21 0.14 3.4e-04 5.45 5.17e-08 0.34 FALSE
LHb Rbbp9 alternative polyA NM_019219.3 0.25 1 0.12 7.4e-04 5.44 5.29e-08 0.07 FALSE
LHb Rbbp9 alternative polyA XM_039104445.1 0.25 1 0.13 7.1e-04 -5.44 5.29e-08 0.07 FALSE
LHb Otor gene expression Otor 0.24 1990 0.01 1.8e-01 -6.76 1.41e-11 0.33 TRUE
LHb Rrbp1 gene expression Rrbp1 0.24 1593 0.13 6.3e-04 -5.87 4.33e-09 0.49 FALSE
LHb Snrpb2 gene expression Snrpb2 0.3 1981 0.14 3.6e-04 6.34 2.31e-10 0.34 FALSE
LHb Zfp133 gene expression Zfp133 0.24 26 0.06 2.0e-02 -5.4 6.69e-08 0.37 FALSE
LHb Rbbp9 isoform ratio NM_019219.3 0.21 1 0.15 2.3e-04 5.44 5.29e-08 0.06 FALSE
LHb Rbbp9 isoform ratio XM_039104445.1 0.18 1 0.1 2.6e-03 -5.44 5.29e-08 0.06 FALSE
LHb Dstn mRNA stability Dstn 0.33 1573 0.24 1.9e-06 5.66 1.51e-08 0.46 FALSE
Liver Kif16b alternative polyA XM_039105041.1 0.16 2158 0.13 6.2e-14 6.6 4.19e-11 0.46 FALSE
Liver Kif16b alternative polyA XM_039105043.1 0.11 2158 0.06 4.2e-07 -6.14 8.07e-10 0.48 FALSE
Liver Polr3f alternative TSS NM_001107784.1 0.06 27 0.03 1.6e-04 -5.29 1.25e-07 0.38 FALSE
Liver Polr3f alternative TSS XM_039105045.1 0.04 46 0.03 2.7e-04 5.3 1.16e-07 0.37 FALSE
Liver Kif16b gene expression Kif16b 0.24 83 0.2 1.4e-21 6.69 2.22e-11 0.61 FALSE
Liver LOC120101717 gene expression LOC120101717 0.05 2365 0.01 1.9e-02 -6.62 3.51e-11 0.21 FALSE
Liver Smim26 gene expression Smim26 0.08 1 0.04 2.4e-05 -5.21 1.86e-07 0.53 FALSE
Liver Kif16b isoform ratio NM_001107783.2 0.03 1 0.03 2.2e-04 6.29 3.22e-10 0.03 FALSE
Liver Kif16b isoform ratio XM_039105043.1 0.03 2158 0.01 1.6e-02 -6.35 2.21e-10 0.38 FALSE
Liver Snrpb2 intron excision ratio chr3_130399307_130400989 0.04 1 0.04 3.1e-05 -6.2 5.69e-10 0.03 FALSE
Liver Snrpb2 intron excision ratio chr3_130399832_130400989 0.05 1 0.05 4.2e-06 6.2 5.69e-10 0.03 FALSE
Liver Dstn mRNA stability Dstn 0.63 1572 0.39 8.2e-46 5.37 7.95e-08 0.15 FALSE
NAcc Kif16b alternative polyA XM_039105041.1 0.06 2158 0.04 5.5e-06 6.54 6.10e-11 0.44 FALSE
NAcc LOC120101719 alternative polyA XR_005502514.1 0.11 1 0.15 1.4e-16 6.7 2.13e-11 0.46 FALSE
NAcc Kif16b gene expression Kif16b 0.08 1 0.04 2.8e-05 -5.82 5.81e-09 0.01 FALSE
NAcc LOC102550304 gene expression LOC102550304 0.18 7 0.25 7.8e-29 5.28 1.32e-07 0.08 TRUE
NAcc Otor gene expression Otor 0.03 1 0.04 9.3e-06 6.53 6.63e-11 0.09 FALSE
NAcc Pcsk2 gene expression Pcsk2 0.09 1455 0.12 1.6e-13 6.38 1.79e-10 0.39 FALSE
NAcc Rrbp1 gene expression Rrbp1 0.07 1 0.07 8.1e-09 5.69 1.24e-08 0.17 FALSE
NAcc Snrpb2 gene expression Snrpb2 0.04 1981 0.03 1.2e-04 6.68 2.34e-11 0.43 FALSE
NAcc Kif16b isoform ratio XM_006235108.4 0.02 2158 0.02 1.9e-03 6.52 7.05e-11 0.35 FALSE
NAcc LOC120101719 isoform ratio XR_005502514.1 0.12 1 0.13 3.4e-15 6.7 2.13e-11 0.46 FALSE
NAcc Snrpb2 intron excision ratio chr3_130399307_130400989 0.08 1981 0.07 2.0e-08 6.38 1.79e-10 0.38 FALSE
NAcc Snrpb2 intron excision ratio chr3_130399832_130400989 0.08 1981 0.09 1.6e-10 -6.76 1.35e-11 0.48 FALSE
NAcc Dstn mRNA stability Dstn 0.28 1 0.32 2.1e-38 -5.76 8.54e-09 0.2 FALSE
NAcc Dtd1 mRNA stability Dtd1 0.03 9 0.02 6.9e-04 -5.26 1.45e-07 0.44 FALSE
OFC LOC120101719 alternative polyA XR_005502514.1 0.35 43 0.3 7.6e-08 6.64 3.04e-11 0.47 FALSE
OFC LOC120101719 alternative polyA XR_005502515.1 0.35 86 0.29 1.6e-07 -6.73 1.67e-11 0.47 FALSE
OFC Rbbp9 alternative polyA NM_019219.3 0.34 1 0.22 5.9e-06 5.35 8.92e-08 0.24 FALSE
OFC Rbbp9 alternative polyA XM_039104444.1 0.34 1 0.22 6.1e-06 -5.35 8.92e-08 0.24 FALSE
OFC Rbbp9 alternative polyA NM_019219.3 0.38 1 0.25 1.3e-06 5.35 8.92e-08 0.36 FALSE
OFC Rbbp9 alternative polyA XM_039104445.1 0.37 1 0.24 2.0e-06 -5.35 8.92e-08 0.33 FALSE
OFC LOC120101719 gene expression LOC120101719 0.18 1 0.22 7.2e-06 -6.4 1.59e-10 0.05 FALSE
OFC Pcsk2 gene expression Pcsk2 0.56 1 0.36 1.7e-09 -6.52 6.81e-11 0.35 FALSE
OFC LOC120101719 isoform ratio XR_005502514.1 0.38 1 0.26 5.6e-07 6.62 3.60e-11 0.16 FALSE
OFC LOC120101719 intron excision ratio chr3_130525654_130567132 0.13 10 0.14 2.9e-04 5.9 3.56e-09 0.39 FALSE
OFC LOC120101719 intron excision ratio chr3_130529471_130567132 0.14 10 0.15 2.4e-04 -5.89 3.84e-09 0.4 TRUE
OFC Dstn mRNA stability Dstn 0.32 309 0.21 1.3e-05 -5.85 4.97e-09 0.51 FALSE
PL Kif16b alternative polyA XM_039105041.1 0.03 2158 0.03 3.3e-04 6.85 7.28e-12 0.44 FALSE
PL LOC120101719 alternative polyA XR_005502514.1 0.3 1 0.35 2.0e-39 6.69 2.31e-11 0.44 FALSE
PL LOC120101719 alternative polyA XR_005502515.1 0.34 1 0.37 4.9e-42 -6.65 2.95e-11 0.38 FALSE
PL Rbbp9 alternative polyA NM_019219.3 0.32 1 0.35 1.1e-39 5.38 7.24e-08 0.68 FALSE
PL LOC102550304 gene expression LOC102550304 0.45 57 0.51 3.1e-64 5.3 1.18e-07 0.09 FALSE
PL Otor gene expression Otor 0.04 1 0.06 5.0e-07 6.75 1.50e-11 0.43 FALSE
PL Pcsk2 gene expression Pcsk2 0.09 1455 0.15 2.6e-16 6.33 2.39e-10 0.33 FALSE
PL Snrpb2 gene expression Snrpb2 0.1 1 0.1 2.1e-11 -6.15 7.83e-10 0.02 FALSE
PL Zfp133 gene expression Zfp133 0.14 1 0.14 1.6e-15 5.25 1.52e-07 0.44 FALSE
PL LOC120101719 isoform ratio XR_005502514.1 0.43 25 0.41 5.9e-48 6.36 1.97e-10 0.58 TRUE
PL Rbbp9 isoform ratio NM_019219.3 0.24 8 0.3 2.5e-33 -5.4 6.52e-08 0.36 TRUE
PL Rbbp9 isoform ratio XM_039104445.1 0.17 1 0.22 2.7e-23 -5.41 6.16e-08 0.72 FALSE
PL Snrpb2 isoform ratio NM_001108592.3 0.05 1 0.06 2.3e-07 -6.86 7.02e-12 0.62 TRUE
PL Snrpb2 isoform ratio XM_039105470.1 0.04 1981 0.05 2.3e-06 -5.99 2.04e-09 0.51 FALSE
PL Dzank1 intron excision ratio chr3_131906549_131907051 0.1 1 0.09 1.9e-10 5.41 6.17e-08 0.7 FALSE
PL LOC120101719 intron excision ratio chr3_130525654_130567132 0.26 1 0.4 3.9e-47 6.75 1.49e-11 0.54 FALSE
PL LOC120101719 intron excision ratio chr3_130529471_130567132 0.13 1 0.22 1.2e-23 -6.65 2.95e-11 0.38 FALSE
PL Sec23b intron excision ratio chr3_131955920_131958981 0.09 76 0.1 5.0e-11 -5.24 1.64e-07 0.48 FALSE
PL Snrpb2 intron excision ratio chr3_130399307_130400989 0.06 1 0.05 2.4e-06 -6.66 2.83e-11 0.29 FALSE
PL Snrpb2 intron excision ratio chr3_130399832_130400989 0.06 1981 0.06 2.7e-07 -6.72 1.87e-11 0.5 FALSE
PL Dstn mRNA stability Dstn 0.54 137 0.41 4.7e-48 -5.56 2.73e-08 0.12 FALSE
PL Pcsk2 mRNA stability Pcsk2 0.04 1 0.03 1.1e-04 6.15 7.73e-10 0.04 FALSE
PL Sec23b mRNA stability Sec23b 0.35 55 0.45 3.7e-54 5.22 1.79e-07 0.39 FALSE
PL Snrpb2 mRNA stability Snrpb2 0.02 1981 0.03 2.1e-04 5.98 2.22e-09 0.32 FALSE
pVTA LOC102550304 gene expression LOC102550304 0.35 44 0.38 2.4e-17 5.24 1.64e-07 0.1 FALSE
pVTA Otor gene expression Otor 0.11 1 0.13 3.8e-06 6.15 7.99e-10 0.03 FALSE
pVTA Pcsk2 gene expression Pcsk2 0.46 29 0.38 2.6e-17 6.35 2.21e-10 0.58 FALSE
pVTA Rrbp1 gene expression Rrbp1 0.32 1 0.17 8.4e-08 5.48 4.25e-08 0.06 FALSE
pVTA Sec23b gene expression Sec23b 0.78 339 0.74 3.2e-46 -5.23 1.70e-07 0.36 FALSE
pVTA Snrpb2 gene expression Snrpb2 0.07 1954 0.06 1.9e-03 6.77 1.31e-11 0.42 FALSE
pVTA Rrbp1 intron excision ratio chr3_131351451_131353366 0.1 94 0.06 1.5e-03 -5.42 5.93e-08 0.6 FALSE
pVTA Dstn mRNA stability Dstn 0.1 1 0.09 9.1e-05 -5.78 7.48e-09 0.08 FALSE
pVTA Pcsk2 mRNA stability Pcsk2 0.11 1 0.15 5.3e-07 6.12 9.61e-10 0.04 FALSE
pVTA Sec23b mRNA stability Sec23b 0.38 28 0.4 1.1e-18 5.24 1.63e-07 0.6 FALSE
RMTg Snrpb2 alternative TSS XM_039105470.1 0.11 1 0.08 3.2e-03 6.66 2.83e-11 0.05 FALSE
RMTg Otor gene expression Otor 0.1 1990 0.06 1.3e-02 -6.46 1.05e-10 0.3 FALSE
RMTg Rrbp1 gene expression Rrbp1 0.28 1 0.26 1.4e-07 5.63 1.83e-08 0.07 FALSE
RMTg Rbbp9 isoform ratio NM_019219.3 0.18 1822 0.11 8.3e-04 -5.26 1.48e-07 0.5 FALSE
RMTg Dstn mRNA stability Dstn 0.1 1573 0.06 8.3e-03 5.77 8.00e-09 0.36 FALSE