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chr20:883,910-4,164,571

Trait: Tail length

Best TWAS P=2.99e-08 · Best GWAS P=1.94e-06 conditioned to 9.42e-01

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	RT1-N3	alternative polyA	ENSRNOT00000001035	0.16	23	0.14	1.5e-15	-5.11	3.19e-07	0.36	FALSE
Adipose	RT1-S3	intron excision ratio	chr20:2624215:2624418	0.35	39	0.1	5.6e-11	-5.39	6.94e-08	0.67	FALSE
Adipose	RT1-S3	intron excision ratio	chr20:2633040:2633243	0.35	61	0.1	5.9e-11	-5.4	6.82e-08	0.67	FALSE
Adipose	RT1-S3	intron excision ratio	chr20:2691672:2691881	0.57	61	0.3	1.2e-33	5.43	5.79e-08	0.7	FALSE
Adipose	ENSRNOG00000031607	intron excision ratio	chr20:2626584:2635694	0.06	38	0.01	7.5e-03	-5.47	4.40e-08	0.62	FALSE
Adipose	ENSRNOG00000031607	intron excision ratio	chr20:2626584:2657802	0.07	26	0.01	3.3e-02	-5.47	4.50e-08	0.62	FALSE
Adipose	ENSRNOG00000031607	intron excision ratio	chr20:2691672:2691881	0.56	214	0.3	1.1e-33	5.4	6.63e-08	0.76	FALSE
Adipose	RT1-T24-1	intron excision ratio	chr20:2691672:2691881	0.59	61	0.3	1.2e-33	5.43	5.78e-08	0.67	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20:2691672:2691881	0.58	61	0.3	1.2e-33	5.43	5.79e-08	0.68	FALSE
Adipose	RT1-M6-2	mRNA stability	ENSRNOG00000040052	0.02	16	0.02	5.1e-03	-5.13	2.90e-07	0.16	FALSE
BLA	RT1-N3	gene expression	ENSRNOG00000000795	0.66	109	0.49	2.6e-29	5.38	7.31e-08	0.66	FALSE
BLA	Gtf2h4	gene expression	ENSRNOG00000000831	0.19	1269	0.14	3.6e-08	5.24	1.64e-07	0.3	FALSE
BLA	Ddr1	gene expression	ENSRNOG00000057125	0.29	1360	0.22	7.9e-12	5.44	5.28e-08	0.28	FALSE
BLA	RT1-CE11	intron excision ratio	chr20:3276101:3276342	0.13	88	0.06	4.2e-04	5.14	2.70e-07	0.2	FALSE
BLA	RT1-CE11	intron excision ratio	chr20:3297784:3339747	0.22	2863	0.06	5.1e-04	-5.29	1.20e-07	0.23	FALSE
BLA	ENSRNOG00000048951	intron excision ratio	chr20:3276101:3276342	0.11	100	0.04	2.1e-03	5.5	3.72e-08	0.18	FALSE
BLA	ENSRNOG00000048951	intron excision ratio	chr20:3297784:3339747	0.25	2460	0.06	6.2e-04	-5.36	8.33e-08	0.23	FALSE
BLA	RT1-CE16	intron excision ratio	chr20:3276101:3276342	0.11	100	0.04	2.1e-03	5.5	3.72e-08	0.18	FALSE
BLA	RT1-CE16	intron excision ratio	chr20:3297784:3339747	0.25	2460	0.06	6.2e-04	-5.36	8.33e-08	0.23	FALSE
BLA	RT1-CE15	intron excision ratio	chr20:3276101:3276342	0.11	100	0.04	2.1e-03	5.5	3.72e-08	0.18	FALSE
BLA	RT1-CE15	intron excision ratio	chr20:3297784:3339747	0.25	2460	0.06	6.2e-04	-5.36	8.33e-08	0.23	FALSE
BLA	RT1-CE14	intron excision ratio	chr20:3276101:3276342	0.11	110	0.05	1.7e-03	5.54	2.99e-08	0.19	TRUE
BLA	RT1-CE14	intron excision ratio	chr20:3297784:3339747	0.24	2511	0.06	5.9e-04	-5.32	1.04e-07	0.22	FALSE
Brain	RT1-N3	alternative TSS	ENSRNOT00000001035	0.14	9	0.06	1.5e-06	-5.19	2.07e-07	0.34	FALSE
Brain	RT1-N3	alternative TSS	ENSRNOT00000115132	0.13	9	0.06	2.2e-06	5.2	1.95e-07	0.34	FALSE
Brain	RT1-N3	gene expression	ENSRNOG00000000795	0.62	25	0.54	3.8e-59	5.36	8.20e-08	0.34	FALSE
Brain	RT1-T24-1	isoform ratio	ENSRNOT00000078454	0.08	1275	0.06	2.7e-06	-5.37	7.77e-08	0.28	FALSE
Brain	RT1-S3	intron excision ratio	chr20:2672840:2673017	0.15	1188	0.05	1.8e-05	-5.39	7.24e-08	0.54	FALSE
Brain	RT1-S3	intron excision ratio	chr20:2741359:2741537	0.16	1188	0.12	7.1e-11	5.2	2.00e-07	0.67	FALSE
Brain	Prr3	intron excision ratio	chr20:2793415:2793683	0.04	1332	0.01	4.6e-02	-5.24	1.64e-07	0.34	FALSE
Brain	ENSRNOG00000031607	intron excision ratio	chr20:2691672:2741756	0.03	1011	0.01	1.4e-02	-5.35	8.80e-08	0.35	FALSE
Brain	ENSRNOG00000031607	intron excision ratio	chr20:2741569:2741756	0.31	1011	0.04	8.1e-05	5.38	7.50e-08	0.55	FALSE
Brain	ENSRNOG00000031607	intron excision ratio	chr20:2741803:2741939	0.17	1011	0.11	3.9e-10	-5.23	1.70e-07	0.72	FALSE
Brain	RT1-T24-1	intron excision ratio	chr20:2672840:2673017	0.14	1275	0.05	1.8e-05	-5.37	7.69e-08	0.52	FALSE
Brain	RT1-T24-1	intron excision ratio	chr20:2691672:2741756	0.03	1275	0.02	1.2e-02	-5.35	8.92e-08	0.33	FALSE
Brain	RT1-T24-1	intron excision ratio	chr20:2741359:2741537	0.16	1275	0.12	6.9e-11	5.19	2.15e-07	0.65	FALSE
Brain	RT1-T24-1	intron excision ratio	chr20:2741569:2741756	0.18	1275	0.04	7.5e-05	5.38	7.35e-08	0.49	FALSE
Brain	RT1-T24-1	intron excision ratio	chr20:2741803:2741939	0.16	1275	0.11	2.8e-10	-5.22	1.75e-07	0.65	FALSE
Brain	RT1-CE11	intron excision ratio	chr20:3276101:3276342	0.17	2863	0.12	6.2e-11	5.42	5.89e-08	0.44	FALSE
Brain	RT1-T24-4	intron excision ratio	chr20:2672840:2673017	0.14	1243	0.05	1.8e-05	-5.38	7.46e-08	0.53	FALSE
Brain	RT1-T24-4	intron excision ratio	chr20:2691672:2741756	0.03	1243	0.02	1.2e-02	-5.35	8.76e-08	0.33	FALSE
Brain	RT1-T24-4	intron excision ratio	chr20:2741359:2741537	0.16	1243	0.12	7.0e-11	5.19	2.11e-07	0.65	FALSE
Brain	RT1-T24-4	intron excision ratio	chr20:2741569:2741756	0.19	1243	0.04	7.6e-05	5.39	7.09e-08	0.5	FALSE
Brain	RT1-T24-4	intron excision ratio	chr20:2741803:2741939	0.16	1243	0.11	2.9e-10	-5.23	1.72e-07	0.65	FALSE
Brain	ENSRNOG00000048951	intron excision ratio	chr20:3276101:3276342	0.17	2460	0.12	7.9e-11	5.5	3.79e-08	0.49	FALSE
Brain	RT1-CE16	intron excision ratio	chr20:3276101:3276342	0.17	2460	0.12	7.9e-11	5.5	3.79e-08	0.49	FALSE
Brain	RT1-CE15	intron excision ratio	chr20:3276101:3276342	0.17	2460	0.12	7.9e-11	5.5	3.79e-08	0.49	FALSE
Brain	RT1-CE14	intron excision ratio	chr20:3276101:3276342	0.17	2511	0.12	7.3e-11	5.45	4.93e-08	0.47	FALSE
Eye	ENSRNOG00000031607	gene expression	ENSRNOG00000031607	0.78	13	0.31	1.2e-05	-5.21	1.93e-07	0.18	FALSE
Eye	ENSRNOG00000064836	gene expression	ENSRNOG00000064836	0.56	986	0.06	4.3e-02	-5.42	5.96e-08	0.2	FALSE
Eye	ENSRNOG00000031607	intron excision ratio	chr20:2626584:2657802	0.57	1011	0.1	1.5e-02	-5.4	6.75e-08	0.17	FALSE
Eye	RT1-CE11	intron excision ratio	chr20:3300498:3317965	0.44	2863	0.06	4.5e-02	5.2	1.98e-07	0.1	FALSE
Eye	RT1-CE14	intron excision ratio	chr20:3300498:3317965	0.44	2511	0.06	4.4e-02	5.11	3.27e-07	0.1	FALSE
Eye	ENSRNOG00000070050	intron excision ratio	chr20:3119281:3124288	0.53	1652	0.04	8.1e-02	5.33	9.78e-08	0.17	FALSE
IL	ENSRNOG00000031607	isoform ratio	ENSRNOT00000050099	0.21	1004	0.09	3.0e-03	-5.41	6.22e-08	0.28	FALSE
IL	RT1-CE15	isoform ratio	ENSRNOT00000112433	0.12	25	0.08	6.4e-03	5.39	7.12e-08	0.07	FALSE
IL	Abcf1	intron excision ratio	chr20:2802656:2807786	0.2	13	0.14	2.6e-04	-5.48	4.22e-08	0.21	FALSE
LHb	ENSRNOG00000031607	alternative polyA	ENSRNOT00000048535	0.19	1000	0.11	1.4e-03	5.32	1.04e-07	0.22	FALSE
LHb	ENSRNOG00000031607	alternative polyA	ENSRNOT00000050099	0.22	1000	0.14	3.6e-04	-5.28	1.29e-07	0.25	FALSE
LHb	RT1-N3	gene expression	ENSRNOG00000000795	0.34	10	0.15	2.3e-04	5.35	8.83e-08	0.4	FALSE
Liver	AABR07044397.1	gene expression	ENSRNOG00000050998	0.09	114	0.04	1.1e-05	-5.25	1.50e-07	0.79	FALSE
Liver	Ddr1	gene expression	ENSRNOG00000057125	0.03	1297	0.01	1.5e-02	5.22	1.75e-07	0.31	FALSE
Liver	ENSRNOG00000031607	intron excision ratio	chr20:2651658:2657802	0.05	7	-0	5.5e-01	-5.3	1.13e-07	0.15	FALSE
NAcc	ENSRNOG00000065364	gene expression	ENSRNOG00000065364	0.06	2961	0.02	2.3e-02	-5.34	9.37e-08	0.09	FALSE
NAcc	RT1-CE11	intron excision ratio	chr20:3297784:3339747	0.28	226	0.14	2.4e-10	-5.2	2.04e-07	0.08	FALSE
NAcc	RT1-CE14	intron excision ratio	chr20:3297784:3339747	0.28	236	0.14	2.8e-10	-5.21	1.88e-07	0.07	FALSE
OFC	ENSRNOG00000065780	alternative TSS	ENSRNOT00000105641	0.25	2451	0.18	3.8e-05	-5.21	1.91e-07	0.17	FALSE
OFC	Gnl1	isoform ratio	ENSRNOT00000050373	0.33	13	0.28	2.4e-07	-5.17	2.39e-07	0.58	FALSE
PL	RT1-N3	gene expression	ENSRNOG00000000795	0.53	49	0.48	1.1e-40	5.19	2.14e-07	0.71	FALSE
PL	AABR07044375.1	gene expression	ENSRNOG00000050215	0.57	156	0.32	1.3e-24	5.41	6.19e-08	0.37	FALSE
PL	ENSRNOG00000031607	intron excision ratio	chr20:2691672:2741756	0.04	5	0.02	1.7e-02	-5.19	2.09e-07	0.3	FALSE
PL	RT1-T24-1	intron excision ratio	chr20:2691672:2741756	0.04	7	0.02	1.7e-02	-5.11	3.21e-07	0.27	FALSE
PL	RT1-CE11	intron excision ratio	chr20:3379574:3379756	0.18	2840	0.1	4.9e-08	5.11	3.21e-07	0.05	FALSE
PL	RT1-T24-4	intron excision ratio	chr20:2691672:2741756	0.04	5	0.02	2.1e-02	-5.19	2.10e-07	0.27	FALSE
PL	ENSRNOG00000069480	intron excision ratio	chr20:3379574:3379756	0.2	2927	0.1	3.9e-08	5.11	3.17e-07	0.06	FALSE