chr8:94,532,832-97,936,197

Trait: Body weight

Best TWAS P=1.98e-10 · Best GWAS P=1.70e-08 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose LOC102551788 gene expression LOC102551788 0.17 8 0.08 2.5e-09 -5.28 1.27e-07 0.03 TRUE
Adipose Trpc1 gene expression Trpc1 0.08 2010 0.05 3.2e-06 5.4 6.85e-08 0.78 FALSE
Adipose Trpc1 intron excision ratio chr8_96280099_96282351 0.04 2010 0.03 1.5e-04 5.39 7.16e-08 0.76 FALSE
BLA Rasa2 alternative polyA NM_001105724.1 0.07 1879 0.03 9.7e-03 6.03 1.67e-09 0.65 FALSE
BLA Rasa2 alternative polyA XM_039080892.1 0.08 1879 0.05 1.4e-03 -5.98 2.17e-09 0.7 FALSE
BLA Rasa2 alternative polyA NM_001105724.1 0.07 1879 0.02 1.8e-02 5.58 2.40e-08 0.56 FALSE
BLA Rasa2 alternative polyA XM_039080892.1 0.08 1879 0.05 1.5e-03 -5.42 5.92e-08 0.51 TRUE
BLA Rasa2 gene expression Rasa2 0.11 1879 0.08 5.5e-05 5.89 3.89e-09 0.28 FALSE
BLA Trpc1 intron excision ratio chr8_96280099_96282351 0.07 1 0.06 6.9e-04 -5.25 1.52e-07 0.08 FALSE
BLA Atp1b3 mRNA stability Atp1b3 0.07 1 0.08 7.3e-05 -5.47 4.43e-08 0.17 FALSE
Brain Tfdp2 alternative TSS XM_039081179.1 0.03 1808 0.01 1.4e-02 5.38 7.63e-08 0.54 FALSE
Brain Atp1b3 gene expression Atp1b3 0.09 4 0.04 1.7e-04 6.13 8.98e-10 0.58 TRUE
Brain Chst2 gene expression Chst2 0.29 2201 0.17 1.3e-15 5.39 6.98e-08 0.07 FALSE
Brain Tfdp2 intron excision ratio chr8_96795874_96804811 0.06 1808 0.04 2.4e-04 -6.28 3.30e-10 0.25 FALSE
Brain Trpc1 intron excision ratio chr8_96280099_96280911 0.13 2015 0.1 2.1e-09 -5.81 6.40e-09 0.81 FALSE
Brain Trpc1 intron excision ratio chr8_96280099_96282351 0.18 261 0.17 2.6e-15 -5.81 6.42e-09 0.76 FALSE
Brain Atp1b3 mRNA stability Atp1b3 0.46 22 0.43 4.6e-43 5.48 4.23e-08 0.61 FALSE
Brain Gk5 mRNA stability Gk5 0.06 6 0.03 6.8e-04 5.2 1.98e-07 0.65 FALSE
Brain Pls1 mRNA stability Pls1 0.18 1938 0.14 5.0e-13 -6.36 1.98e-10 0.77 TRUE
Brain Trpc1 mRNA stability Trpc1 0.14 2015 0.12 7.9e-11 5.31 1.11e-07 0.72 FALSE
LHb PCOLCE2 gene expression PCOLCE2 0.35 15 0.18 5.4e-05 5.2 2.00e-07 0.72 FALSE
Liver PCOLCE2 gene expression PCOLCE2 0.09 1 0.08 2.4e-09 -5.41 6.47e-08 0.9 FALSE
Liver Atp1b3 mRNA stability Atp1b3 0.06 2 0.04 5.0e-05 5.34 9.50e-08 0.74 TRUE
NAcc LOC102552777 alternative polyA XR_005488673.1 0.05 72 0.03 3.4e-04 -5.87 4.41e-09 0.68 TRUE
NAcc Trpc1 intron excision ratio chr8_96280099_96282351 0.12 2015 0.11 2.0e-12 5.87 4.45e-09 0.79 FALSE
NAcc Trpc1 intron excision ratio chr8_96280967_96282351 0.12 6 0.15 1.6e-16 -5.5 3.77e-08 0.8 FALSE
NAcc Atp1b3 mRNA stability Atp1b3 0.11 32 0.14 2.0e-15 5.39 6.95e-08 0.78 FALSE
OFC U2surp alternative polyA XM_039082560.1 0.27 1 0.03 5.9e-02 -5.19 2.06e-07 0.06 TRUE
OFC Rnf7 gene expression Rnf7 0.46 22 0.11 1.2e-03 5.25 1.52e-07 0.49 FALSE
PL Tfdp2 alternative polyA NM_001106847.2 0.16 39 0.19 8.8e-21 5.49 3.94e-08 0.63 FALSE
PL Tfdp2 alternative polyA XM_017595585.2 0.16 28 0.18 1.2e-19 -5.35 9.04e-08 0.65 FALSE
PL Trpc1 intron excision ratio chr8_96280099_96282351 0.04 1 0.04 2.0e-05 -5.18 2.16e-07 0.3 FALSE
PL Atp1b3 mRNA stability Atp1b3 0.13 1 0.18 1.3e-19 -5.47 4.43e-08 0.77 FALSE
pVTA Tfdp2 isoform ratio NM_001106847.2 0.07 1 0.05 2.7e-03 5.45 5.16e-08 0.05 FALSE
pVTA Trpc1 intron excision ratio chr8_96280099_96282351 0.14 1 0.1 3.0e-05 -5.25 1.52e-07 0.17 FALSE
pVTA Trpc1 intron excision ratio chr8_96280967_96282351 0.12 1 0.11 1.9e-05 5.21 1.91e-07 0.1 FALSE