Best TWAS P=1.76e-08 · Best GWAS P=4.34e-07 conditioned to 4.71e-01
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Hspb11 | gene expression | ENSRNOG00000010241 | 0.22 | 71 | 0.16 | 2.3e-17 | 5.27 | 1.40e-07 | 0.21 | FALSE |
Adipose | Ttc4 | gene expression | ENSRNOG00000042467 | 0.05 | 1500 | 0.02 | 2.1e-03 | -5.63 | 1.76e-08 | 0.48 | TRUE |
Adipose | Echdc2 | mRNA stability | ENSRNOG00000029333 | 0.04 | 41 | 0.02 | 1.4e-03 | 5.39 | 7.09e-08 | 0.51 | FALSE |
Brain | Yipf1 | gene expression | ENSRNOG00000010512 | 0.08 | 2073 | 0.05 | 1.1e-05 | 5.37 | 7.89e-08 | 0.03 | FALSE |
Brain | Acot11 | mRNA stability | ENSRNOG00000007837 | 0.14 | 1637 | 0.18 | 1.5e-16 | -5.32 | 1.06e-07 | 0.6 | FALSE |
LHb | Fam151a | gene expression | ENSRNOG00000007799 | 0.18 | 3 | 0.12 | 1.0e-03 | -5.32 | 1.02e-07 | 0.3 | FALSE |
LHb | Mroh7 | gene expression | ENSRNOG00000058870 | 0.35 | 10 | 0.17 | 8.1e-05 | -5.54 | 3.11e-08 | 0.45 | FALSE |
LHb | Acot11 | mRNA stability | ENSRNOG00000007837 | 0.29 | 1631 | 0.2 | 1.7e-05 | -5.34 | 9.53e-08 | 0.47 | FALSE |
NAcc | Glis1 | gene expression | ENSRNOG00000000138 | 0.04 | 2050 | 0.01 | 2.6e-02 | -5.36 | 8.38e-08 | 0.33 | FALSE |
NAcc | Fam151a | gene expression | ENSRNOG00000007799 | 0.11 | 1464 | 0.07 | 3.7e-06 | -5.56 | 2.68e-08 | 0.53 | FALSE |
NAcc | Acot11 | gene expression | ENSRNOG00000007837 | 0.07 | 1635 | 0.03 | 4.9e-03 | -5.28 | 1.32e-07 | 0.23 | FALSE |
NAcc | Scp2 | gene expression | ENSRNOG00000011413 | 0.12 | 1723 | 0.07 | 1.0e-05 | -5.15 | 2.62e-07 | 0.55 | FALSE |
PL | Slc1a7 | alternative polyA | ENSRNOT00000016557 | 0.05 | 1926 | 0.01 | 6.9e-02 | -5.15 | 2.61e-07 | 0.29 | FALSE |
PL | Slc1a7 | alternative polyA | ENSRNOT00000016557 | 0.06 | 1926 | 0.03 | 2.9e-03 | -5.26 | 1.43e-07 | 0.47 | FALSE |
PL | Slc1a7 | alternative polyA | ENSRNOT00000077808 | 0.06 | 1926 | 0.03 | 2.8e-03 | 5.27 | 1.33e-07 | 0.47 | FALSE |
PL | Fam151a | mRNA stability | ENSRNOG00000007799 | 0.04 | 1464 | 0.01 | 4.1e-02 | -5.3 | 1.15e-07 | 0.28 | FALSE |