chr3:129,554,891-132,693,612

Trait: Body weight

Best TWAS P=9.55e-19 · Best GWAS P=1.45e-17 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Kif16b alternative polyA ENSRNOT00000036273 0.08 1 0.04 7.2e-05 -5.28 1.30e-07 0.02 FALSE
Adipose Kif16b alternative polyA ENSRNOT00000118037 0.08 1 0.05 5.3e-06 7.71 1.24e-14 0.02 FALSE
Adipose Dstn gene expression ENSRNOG00000005924 0.59 1575 0.48 3.4e-60 7.01 2.38e-12 0.02 FALSE
Adipose Dzank1 gene expression ENSRNOG00000007440 0.07 1 0.03 1.2e-04 -6.43 1.30e-10 0.04 FALSE
Adipose Rbbp9 gene expression ENSRNOG00000007972 0.22 1 0.07 2.9e-08 5.62 1.92e-08 0 FALSE
Adipose Dtd1 gene expression ENSRNOG00000008746 0.28 19 0.15 5.0e-16 6.66 2.80e-11 0.5 FALSE
Adipose Zfp133 gene expression ENSRNOG00000027955 0.17 1755 0.13 3.5e-14 -5.26 1.42e-07 0.58 FALSE
Adipose Kif16b isoform ratio ENSRNOT00000118037 0.08 2140 0.04 4.2e-05 6.11 1.02e-09 0.01 FALSE
Adipose Snrpb2 mRNA stability ENSRNOG00000004967 0.04 20 0.01 1.5e-02 -7.8 6.32e-15 0.39 FALSE
Adipose Dstn mRNA stability ENSRNOG00000005924 0.83 184 0.6 1.1e-83 6.49 8.52e-11 0 FALSE
Adipose Sec23b mRNA stability ENSRNOG00000008411 0.08 1 0.06 5.6e-07 6.25 4.12e-10 0.02 FALSE
BLA Kif16b gene expression ENSRNOG00000004951 0.04 1 0.04 4.1e-03 8.09 6.03e-16 0.04 FALSE
BLA Snrpb2 gene expression ENSRNOG00000004967 0.05 1 0.02 4.4e-02 8.41 3.96e-17 0.05 FALSE
BLA Pcsk2 gene expression ENSRNOG00000005438 0.11 1 0.07 1.9e-04 7.84 4.33e-15 0.04 FALSE
BLA Dstn gene expression ENSRNOG00000005924 0.84 268 0.64 9.8e-44 7.41 1.26e-13 0.25 FALSE
BLA Sec23b gene expression ENSRNOG00000008411 0.87 39 0.67 5.9e-48 5.7 1.17e-08 0 FALSE
BLA Dtd1 gene expression ENSRNOG00000008746 0.25 2 0.16 4.4e-09 5.35 8.80e-08 0.26 FALSE
BLA Zfp133 gene expression ENSRNOG00000027955 0.06 6 0.07 1.9e-04 -5.27 1.39e-07 0.14 FALSE
BLA Otor gene expression ENSRNOG00000028721 0.07 1960 0.04 2.7e-03 -8.84 9.55e-19 0.26 TRUE
BLA Smim26 gene expression ENSRNOG00000036971 0.11 41 0.06 5.0e-04 5.97 2.36e-09 0.37 FALSE
BLA ENSRNOG00000067833 gene expression ENSRNOG00000067833 0.09 1 0.02 3.9e-02 6.54 6.10e-11 0.04 FALSE
BLA Rbbp9 intron excision ratio chr3:131927367:131929585 0.14 1 0.07 8.2e-05 7.19 6.62e-13 0.54 FALSE
BLA Rbbp9 intron excision ratio chr3:131929308:131929585 0.13 1 0.07 7.7e-05 -7.19 6.62e-13 0.45 FALSE
BLA Rbbp9 intron excision ratio chr3:131929690:131930645 0.08 1819 0.04 2.9e-03 5.23 1.70e-07 0.43 FALSE
BLA Rbbp9 intron excision ratio chr3:131929690:131931999 0.17 1 0.14 6.7e-08 -6.33 2.39e-10 0.03 FALSE
BLA Sec23b intron excision ratio chr3:131955920:131958981 0.09 17 0.05 1.7e-03 5.72 1.05e-08 0.17 FALSE
BLA Pcsk2 mRNA stability ENSRNOG00000005438 0.23 1 0.15 3.1e-08 -7.95 1.82e-15 0.14 FALSE
BLA Dstn mRNA stability ENSRNOG00000005924 0.45 182 0.39 2.2e-22 8 1.29e-15 0.62 FALSE
BLA Kat14 mRNA stability ENSRNOG00000007160 0.05 4 0.03 9.8e-03 -5.87 4.29e-09 0.15 FALSE
BLA Sec23b mRNA stability ENSRNOG00000008411 0.42 9 0.33 2.8e-18 5.71 1.16e-08 0 TRUE
Brain Rrbp1 alternative TSS ENSRNOT00000055602 0.03 1597 0.03 2.1e-03 -7.1 1.24e-12 0.4 FALSE
Brain Rrbp1 alternative TSS ENSRNOT00000101060 0.03 1597 0.02 2.7e-03 7.17 7.42e-13 0.39 FALSE
Brain Kif16b gene expression ENSRNOG00000004951 0.19 74 0.09 1.0e-08 6.12 9.38e-10 0.16 FALSE
Brain Snrpb2 gene expression ENSRNOG00000004967 0.06 1963 0.05 1.0e-05 6.06 1.38e-09 0.47 FALSE
Brain Pcsk2 gene expression ENSRNOG00000005438 0.38 1 0.44 3.9e-44 7.81 5.65e-15 0.06 FALSE
Brain Dstn gene expression ENSRNOG00000005924 0.72 189 0.8 3.2e-120 7.25 4.18e-13 0 FALSE
Brain Rrbp1 gene expression ENSRNOG00000005958 0.14 1597 0.16 4.1e-15 -7.39 1.52e-13 0.27 FALSE
Brain Dzank1 gene expression ENSRNOG00000007440 0.08 1807 0.07 2.7e-07 -5.45 5.08e-08 0.5 FALSE
Brain Sec23b gene expression ENSRNOG00000008411 0.78 128 0.8 7.8e-119 6.15 7.67e-10 0 FALSE
Brain Dtd1 gene expression ENSRNOG00000008746 0.16 1 0.17 3.5e-15 6.3 2.90e-10 0.07 TRUE
Brain Zfp133 gene expression ENSRNOG00000027955 0.17 1 0.16 2.7e-14 -6.68 2.32e-11 0.16 FALSE
Brain Otor gene expression ENSRNOG00000028721 0.1 25 0.11 5.1e-10 -8.59 8.82e-18 0.41 FALSE
Brain Smim26 gene expression ENSRNOG00000036971 0.11 1 0.07 1.6e-07 5.41 6.14e-08 0 FALSE
Brain ENSRNOG00000067833 gene expression ENSRNOG00000067833 0.35 345 0.09 6.8e-09 6.29 3.19e-10 0.37 FALSE
Brain Snrpb2 intron excision ratio chr3:130399307:130400989 0.03 1 0.03 5.7e-04 8.15 3.79e-16 0.03 FALSE
Brain Sec23b intron excision ratio chr3:131955920:131958981 0.3 118 0.22 3.0e-20 6.17 6.69e-10 0.05 FALSE
Brain Kif16b mRNA stability ENSRNOG00000004951 0.07 1 0.01 1.5e-02 -7.33 2.26e-13 0.03 FALSE
Brain Snrpb2 mRNA stability ENSRNOG00000004967 0.03 1963 0.01 1.3e-02 5.88 4.12e-09 0.38 FALSE
Brain Dstn mRNA stability ENSRNOG00000005924 0.71 239 0.52 1.2e-56 7.36 1.78e-13 0 FALSE
Brain Sec23b mRNA stability ENSRNOG00000008411 0.55 164 0.65 6.8e-80 6.03 1.68e-09 0 FALSE
Brain Dtd1 mRNA stability ENSRNOG00000008746 0.08 3 0.07 1.7e-07 5.33 1.01e-07 0.21 FALSE
Brain Smim26 mRNA stability ENSRNOG00000036971 0.03 1 0.02 2.7e-03 6.24 4.51e-10 0.03 FALSE
Eye Dstn gene expression ENSRNOG00000005924 0.77 1048 0.25 1.1e-04 7.45 9.33e-14 0.37 FALSE
Eye Sec23b gene expression ENSRNOG00000008411 0.81 19 0.29 2.1e-05 7.21 5.52e-13 0.61 FALSE
Eye Zfp133 intron excision ratio chr3:131829590:131840865 0.3 1 0.04 9.9e-02 -7.27 3.62e-13 0.06 FALSE
IL Pcsk2 gene expression ENSRNOG00000005438 0.49 1 0.21 7.5e-06 8.32 9.00e-17 0.18 FALSE
IL Dstn gene expression ENSRNOG00000005924 0.79 1574 0.39 2.0e-10 7.72 1.13e-14 0.53 FALSE
IL ENSRNOG00000067833 gene expression ENSRNOG00000067833 0.33 9 0.13 5.9e-04 6.81 1.01e-11 0.08 FALSE
IL Dzank1 intron excision ratio chr3:131906549:131908083 0.18 1 0.1 2.0e-03 6.29 3.18e-10 0.05 FALSE
IL Sec23b intron excision ratio chr3:131955920:131958981 0.39 1 0.27 4.2e-07 5.64 1.65e-08 0.04 FALSE
IL Dstn mRNA stability ENSRNOG00000005924 0.54 1574 0.34 4.2e-09 7.33 2.38e-13 0.51 FALSE
LHb Snrpb2 gene expression ENSRNOG00000004967 0.24 1 0.15 2.3e-04 8.19 2.57e-16 0.05 FALSE
LHb Dstn gene expression ENSRNOG00000005924 0.8 8 0.5 1.3e-13 7.67 1.77e-14 0.4 FALSE
LHb Rrbp1 gene expression ENSRNOG00000005958 0.22 1 0.21 1.0e-05 -8.06 7.94e-16 0.09 FALSE
LHb Dzank1 gene expression ENSRNOG00000007440 0.14 1804 0.04 4.6e-02 -6.24 4.45e-10 0.41 FALSE
LHb Sec23b gene expression ENSRNOG00000008411 0.79 17 0.53 6.5e-15 5.29 1.22e-07 0.04 FALSE
LHb Zfp133 gene expression ENSRNOG00000027955 0.19 1 0.03 6.1e-02 -5.62 1.86e-08 0.05 FALSE
LHb Otor gene expression ENSRNOG00000028721 0.26 5 0.01 1.7e-01 -8.82 1.10e-18 0.27 FALSE
LHb Sec23b intron excision ratio chr3:131955920:131958981 0.33 1822 0.17 6.8e-05 5.24 1.63e-07 0.37 FALSE
LHb Kif16b mRNA stability ENSRNOG00000004951 0.11 6 0.03 7.3e-02 -7.94 2.06e-15 0.33 FALSE
LHb Dstn mRNA stability ENSRNOG00000005924 0.39 1 0.37 8.7e-10 7.19 6.44e-13 0.03 FALSE
LHb Sec23b mRNA stability ENSRNOG00000008411 0.57 1822 0.4 1.6e-10 5.37 7.80e-08 0.28 FALSE
Liver Kif16b alternative polyA ENSRNOT00000036273 0.18 1 0.14 6.7e-15 -8.29 1.11e-16 0.48 TRUE
Liver Kif16b alternative polyA ENSRNOT00000118037 0.18 1 0.14 1.3e-15 8.2 2.45e-16 0.3 FALSE
Liver Rrbp1 alternative polyA ENSRNOT00000055602 0.04 1596 0.01 3.5e-02 -5.81 6.37e-09 0.24 FALSE
Liver Rrbp1 alternative polyA ENSRNOT00000101060 0.05 1596 0.02 5.4e-03 5.63 1.76e-08 0.22 FALSE
Liver Kif16b gene expression ENSRNOG00000004951 0.21 12 0.18 3.7e-19 -8.01 1.12e-15 0.64 FALSE
Liver Dstn gene expression ENSRNOG00000005924 0.67 1575 0.53 2.6e-69 7.26 3.74e-13 0.16 FALSE
Liver Kat14 gene expression ENSRNOG00000007160 0.05 37 0.04 3.9e-05 -5.99 2.04e-09 0.02 FALSE
Liver Rbbp9 gene expression ENSRNOG00000007972 0.12 9 0.08 2.9e-09 5.89 3.94e-09 0.24 FALSE
Liver Sec23b gene expression ENSRNOG00000008411 0.09 1824 0.05 5.2e-06 6.32 2.69e-10 0.67 FALSE
Liver Dtd1 gene expression ENSRNOG00000008746 0.2 1829 0.09 1.2e-10 6.13 8.64e-10 0.5 FALSE
Liver Smim26 gene expression ENSRNOG00000036971 0.09 1823 0.04 1.5e-05 6.06 1.32e-09 0.67 FALSE
Liver Kif16b isoform ratio ENSRNOT00000083061 0.06 1 0.04 4.7e-05 -8.24 1.73e-16 0.19 FALSE
Liver Kif16b isoform ratio ENSRNOT00000118037 0.15 2140 0.13 4.0e-14 7.94 2.07e-15 0.44 FALSE
Liver Rrbp1 isoform ratio ENSRNOT00000101060 0.04 1596 0.01 3.3e-02 5.84 5.28e-09 0.23 FALSE
Liver Mgme1 isoform ratio ENSRNOT00000038865 0.03 1 0.02 4.0e-03 -6.8 1.03e-11 0.03 FALSE
Liver Mgme1 isoform ratio ENSRNOT00000098696 0.03 1 0.02 3.2e-03 6.8 1.03e-11 0.03 FALSE
Liver Kif16b intron excision ratio chr3:129976371:129996958 0.03 2140 0.01 2.4e-02 -8.66 4.77e-18 0.08 FALSE
Liver Snrpb2 intron excision ratio chr3:130399307:130400989 0.04 1 0.03 3.5e-04 8.04 8.77e-16 0.05 FALSE
Liver Snrpb2 intron excision ratio chr3:130399832:130400989 0.06 1963 0.03 2.4e-04 -8.04 8.92e-16 0.46 FALSE
Liver Rbbp9 intron excision ratio chr3:131927367:131929585 0.29 91 0.21 2.3e-22 6.54 6.05e-11 0.32 FALSE
Liver Rbbp9 intron excision ratio chr3:131929308:131929585 0.29 25 0.2 9.7e-22 -6.58 4.79e-11 0.34 FALSE
Liver Kif16b mRNA stability ENSRNOG00000004951 0.13 30 0.06 1.2e-07 -7.33 2.26e-13 0.04 FALSE
Liver Dstn mRNA stability ENSRNOG00000005924 0.67 1575 0.5 1.1e-63 7.08 1.48e-12 0.06 FALSE
Liver Polr3f mRNA stability ENSRNOG00000007548 0.25 1804 0.22 1.0e-23 5.4 6.63e-08 0.01 FALSE
Liver Rbbp9 mRNA stability ENSRNOG00000007972 0.04 1818 0.01 8.2e-03 6.33 2.44e-10 0.62 FALSE
NAcc Snrpb2 gene expression ENSRNOG00000004967 0.04 1 0.02 1.4e-02 7.85 4.33e-15 0.03 FALSE
NAcc Pcsk2 gene expression ENSRNOG00000005438 0.25 6 0.15 3.4e-11 7.45 9.69e-14 0.41 FALSE
NAcc Dstn gene expression ENSRNOG00000005924 0.84 1 0.7 1.4e-71 7.36 1.79e-13 0.01 FALSE
NAcc Rrbp1 gene expression ENSRNOG00000005958 0.11 1 0.11 2.0e-08 -7.13 1.01e-12 0 FALSE
NAcc Sec23b gene expression ENSRNOG00000008411 0.81 242 0.8 3.7e-94 5.85 4.96e-09 0 FALSE
NAcc Dtd1 gene expression ENSRNOG00000008746 0.35 111 0.25 5.4e-19 5.75 8.95e-09 0.28 FALSE
NAcc Zfp133 gene expression ENSRNOG00000027955 0.09 1755 0.05 1.8e-04 -5.88 4.01e-09 0.21 FALSE
NAcc Otor gene expression ENSRNOG00000028721 0.04 1 0.01 5.2e-02 -8.21 2.28e-16 0.04 FALSE
NAcc Rbbp9 intron excision ratio chr3:131927367:131929585 0.17 1 0.08 7.7e-07 6.64 3.09e-11 0.14 FALSE
NAcc Rbbp9 intron excision ratio chr3:131929308:131929585 0.17 79 0.08 1.7e-06 -6.64 3.13e-11 0.37 FALSE
NAcc Kif16b mRNA stability ENSRNOG00000004951 0.04 27 0.01 5.8e-02 -8.06 7.73e-16 0.46 TRUE
NAcc Dstn mRNA stability ENSRNOG00000005924 0.55 212 0.48 1.3e-39 7.5 6.46e-14 0.1 FALSE
NAcc Rbbp9 mRNA stability ENSRNOG00000007972 0.05 14 0.04 4.1e-04 6.01 1.91e-09 0.59 FALSE
NAcc Sec23b mRNA stability ENSRNOG00000008411 0.41 10 0.44 2.5e-35 5.95 2.60e-09 0 FALSE
OFC Pcsk2 gene expression ENSRNOG00000005438 0.62 9 0.38 5.0e-10 6.21 5.38e-10 0.52 TRUE
OFC Dstn gene expression ENSRNOG00000005924 0.82 41 0.52 1.4e-14 7.41 1.22e-13 0.42 FALSE
OFC Dstn mRNA stability ENSRNOG00000005924 0.29 1574 0.19 3.1e-05 7.63 2.29e-14 0.49 FALSE
OFC Sec23b mRNA stability ENSRNOG00000008411 0.59 1 0.42 3.9e-11 6.19 6.11e-10 0.02 FALSE
PL Snrpb2 gene expression ENSRNOG00000004967 0.12 9 0.11 1.3e-08 8.07 6.83e-16 0.4 FALSE
PL Pcsk2 gene expression ENSRNOG00000005438 0.15 80 0.18 1.0e-13 8.45 2.98e-17 0.3 FALSE
PL Dstn gene expression ENSRNOG00000005924 0.88 165 0.62 4.1e-59 7.25 4.22e-13 0.02 FALSE
PL Rrbp1 gene expression ENSRNOG00000005958 0.07 35 0.02 1.4e-02 -6.04 1.55e-09 0.35 FALSE
PL Sec23b gene expression ENSRNOG00000008411 0.79 134 0.73 3.5e-79 5.74 9.30e-09 0 FALSE
PL Dtd1 gene expression ENSRNOG00000008746 0.16 1 0.16 3.3e-12 6.23 4.56e-10 0.04 FALSE
PL Zfp133 gene expression ENSRNOG00000027955 0.19 1 0.12 1.3e-09 -6.66 2.76e-11 0.14 FALSE
PL Otor gene expression ENSRNOG00000028721 0.06 1972 0.05 1.0e-04 -7.54 4.76e-14 0.46 FALSE
PL ENSRNOG00000067833 gene expression ENSRNOG00000067833 0.16 234 0.13 6.5e-10 5.43 5.53e-08 0.29 FALSE
PL Snrpb2 intron excision ratio chr3:130399307:130400989 0.05 1963 0.03 2.9e-03 8.53 1.45e-17 0.44 FALSE
PL Dzank1 intron excision ratio chr3:131906549:131907051 0.09 1 0.1 2.3e-08 -6.29 3.14e-10 0.02 FALSE
PL Rbbp9 intron excision ratio chr3:131927367:131929585 0.07 3 0.04 2.6e-04 5.28 1.32e-07 0.43 TRUE
PL Rbbp9 intron excision ratio chr3:131929690:131931999 0.05 1 0.02 1.3e-02 -5.69 1.26e-08 0.03 FALSE
PL Sec23b intron excision ratio chr3:131955920:131958981 0.07 69 0.05 1.2e-04 5.62 1.96e-08 0.34 FALSE
PL Kif16b mRNA stability ENSRNOG00000004951 0.11 1 0.07 5.8e-06 -7.54 4.76e-14 0.02 FALSE
PL Snrpb2 mRNA stability ENSRNOG00000004967 0.09 41 0.03 1.4e-03 5.8 6.76e-09 0.1 FALSE
PL Pcsk2 mRNA stability ENSRNOG00000005438 0.04 1 0.02 5.4e-03 -8.12 4.68e-16 0.04 FALSE
PL Dstn mRNA stability ENSRNOG00000005924 0.7 52 0.49 6.1e-42 7.25 4.26e-13 0.01 FALSE
PL Sec23b mRNA stability ENSRNOG00000008411 0.4 211 0.45 3.6e-37 5.76 8.19e-09 0.01 FALSE