chr5:47,710,012-49,968,409

Trait: Body weight

Best TWAS P=6.19e-09 · Best GWAS P=2.56e-09 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Slc35a1 alternative TSS ENSRNOT00000011969 0.02 1 0.02 3.7e-03 5.44 5.32e-08 0.04 FALSE
Adipose Slc35a1 alternative TSS ENSRNOT00000081150 0.02 1 0.02 4.4e-03 -5.44 5.32e-08 0.04 FALSE
Adipose Cnr1 gene expression ENSRNOG00000008223 0.06 1345 0.03 3.1e-04 5.16 2.52e-07 0.42 FALSE
Adipose Orc3 gene expression ENSRNOG00000008314 0.03 1 0.02 5.9e-03 -5.28 1.31e-07 0.03 FALSE
Adipose RGD1359108 gene expression ENSRNOG00000009478 0.13 1 0.06 1.9e-07 -5.8 6.72e-09 0.78 FALSE
Adipose Slc35a1 isoform ratio ENSRNOT00000011969 0.02 1 0.01 8.6e-03 5.28 1.31e-07 0.03 FALSE
Adipose Rars2 intron excision ratio chr5:49210334:49211494 0.03 1 0.02 1.2e-03 5.36 8.34e-08 0.04 FALSE
Adipose Slc35a1 mRNA stability ENSRNOG00000008908 0.06 1 0.03 3.0e-04 5.21 1.90e-07 0.11 FALSE
BLA Rars2 gene expression ENSRNOG00000008643 0.08 1563 0.08 7.2e-05 5.2 2.03e-07 0.51 FALSE
BLA Cfap206 gene expression ENSRNOG00000009061 0.85 53 0.65 2.7e-45 -5.25 1.54e-07 0.44 FALSE
BLA Rars2 mRNA stability ENSRNOG00000008643 0.15 12 0.12 5.2e-07 5.39 6.97e-08 0.53 FALSE
BLA Slc35a1 mRNA stability ENSRNOG00000008908 0.07 1 0.04 2.9e-03 5.34 9.33e-08 0.05 FALSE
BLA RGD1359108 mRNA stability ENSRNOG00000009478 0.11 22 0.07 1.8e-04 5.7 1.22e-08 0.73 TRUE
Brain Rars2 alternative polyA ENSRNOT00000011688 0.26 1 0.18 4.4e-16 -5.31 1.09e-07 0.58 FALSE
Brain Rars2 alternative polyA ENSRNOT00000115962 0.26 1 0.18 3.9e-16 5.31 1.09e-07 0.58 FALSE
Brain Orc3 gene expression ENSRNOG00000008314 0.03 1563 0.02 2.7e-03 -5.29 1.22e-07 0.49 FALSE
Brain Cfap206 gene expression ENSRNOG00000009061 0.51 26 0.63 9.3e-76 -5.38 7.45e-08 0.44 TRUE
Brain Rars2 isoform ratio ENSRNOT00000011688 0.05 1 0.07 9.5e-07 -5.34 9.33e-08 0.53 FALSE
Brain Rars2 isoform ratio ENSRNOT00000115962 0.05 1 0.07 5.9e-07 5.34 9.33e-08 0.52 FALSE
Brain Slc35a1 intron excision ratio chr5:49226632:49230692 0.05 1548 0.03 8.2e-04 -5.3 1.16e-07 0.49 FALSE
Brain Slc35a1 mRNA stability ENSRNOG00000008908 0.08 1548 0.06 2.5e-06 5.26 1.45e-07 0.53 FALSE
Brain RGD1359108 mRNA stability ENSRNOG00000009478 0.16 1015 0.12 3.0e-11 5.74 9.44e-09 0.76 FALSE
IL Rars2 alternative polyA ENSRNOT00000011688 0.22 1 0.12 8.3e-04 -5.25 1.52e-07 0.06 FALSE
IL Rars2 alternative polyA ENSRNOT00000115962 0.22 1 0.12 9.2e-04 5.25 1.52e-07 0.06 FALSE
IL Cfap206 gene expression ENSRNOG00000009061 0.42 1500 0.23 3.9e-06 -5.16 2.46e-07 0.44 FALSE
IL Rars2 isoform ratio ENSRNOT00000011688 0.16 3 0.15 1.7e-04 -5.26 1.44e-07 0.38 FALSE
IL Rars2 isoform ratio ENSRNOT00000115962 0.15 4 0.13 4.5e-04 5.26 1.46e-07 0.36 FALSE
IL Slc35a1 intron excision ratio chr5:49230826:49231247 0.14 1 0.04 4.6e-02 5.2 2.02e-07 0.05 FALSE
IL Cnr1 mRNA stability ENSRNOG00000008223 0.23 2 0.08 5.6e-03 -5.12 3.04e-07 0.35 FALSE
LHb Cfap206 gene expression ENSRNOG00000009061 0.7 5 0.41 7.2e-11 -5.29 1.19e-07 0.46 FALSE
LHb Rars2 mRNA stability ENSRNOG00000008643 0.17 3 0.1 2.8e-03 5.16 2.48e-07 0.38 FALSE
Liver Rars2 alternative TSS ENSRNOT00000011688 0.12 1562 0.1 4.8e-11 -5.14 2.70e-07 0.48 FALSE
Liver Orc3 gene expression ENSRNOG00000008314 0.02 1 0.01 2.1e-02 -5.19 2.06e-07 0.03 FALSE
Liver Slc35a1 gene expression ENSRNOG00000008908 0.14 1 0.09 1.9e-10 5.12 3.12e-07 0.35 TRUE
Liver Slc35a1 isoform ratio ENSRNOT00000011969 0.03 1 0.02 2.6e-03 5.44 5.32e-08 0.04 FALSE
Liver Slc35a1 isoform ratio ENSRNOT00000081150 0.04 1548 0.01 1.8e-02 -5.22 1.82e-07 0.39 TRUE
Liver Rars2 intron excision ratio chr5:49184400:49186141 0.21 6 0.12 1.8e-13 -5.15 2.54e-07 0.43 FALSE
Liver Rars2 intron excision ratio chr5:49184400:49187818 0.15 1 0.11 3.0e-12 5.15 2.54e-07 0.38 FALSE
Liver Rars2 intron excision ratio chr5:49222641:49232932 0.03 18 0.01 4.3e-02 5.32 1.02e-07 0.39 FALSE
NAcc Rars2 alternative polyA ENSRNOT00000011688 0.11 1 0.06 1.3e-05 -5.29 1.25e-07 0.3 FALSE
NAcc Rars2 alternative polyA ENSRNOT00000115962 0.1 1 0.06 1.4e-05 5.29 1.25e-07 0.3 FALSE
NAcc Cfap206 gene expression ENSRNOG00000009061 0.59 17 0.51 1.3e-43 -5.31 1.10e-07 0.47 FALSE
NAcc RGD1359108 gene expression ENSRNOG00000009478 0.08 1 0.05 1.5e-04 5.81 6.19e-09 0.17 TRUE
NAcc Rars2 isoform ratio ENSRNOT00000011688 0.05 1 0.04 8.2e-04 -5.37 7.99e-08 0.06 FALSE
NAcc Rars2 isoform ratio ENSRNOT00000115962 0.05 1 0.04 7.9e-04 5.37 7.99e-08 0.07 FALSE
NAcc Slc35a1 intron excision ratio chr5:49226632:49230692 0.04 2 0.03 2.3e-03 -5.2 1.98e-07 0.48 FALSE
NAcc Slc35a1 mRNA stability ENSRNOG00000008908 0.04 1 0.02 6.4e-03 5.16 2.48e-07 0.04 FALSE
NAcc Cfap206 mRNA stability ENSRNOG00000009061 0.04 1 0.04 1.0e-03 -5.16 2.48e-07 0.04 FALSE
NAcc RGD1359108 mRNA stability ENSRNOG00000009478 0.17 20 0.08 1.0e-06 5.8 6.83e-09 0.76 FALSE
OFC RGD1359108 gene expression ENSRNOG00000009478 0.29 1 0.08 5.7e-03 5.3 1.19e-07 0.05 TRUE
PL Rars2 alternative polyA ENSRNOT00000011688 0.05 1 0.04 7.8e-04 -5.15 2.61e-07 0.06 FALSE
PL Rars2 alternative polyA ENSRNOT00000115962 0.05 1 0.03 1.4e-03 5.15 2.61e-07 0.05 FALSE
PL RGD1359108 gene expression ENSRNOG00000009478 0.2 1 0.07 1.0e-05 5.8 6.72e-09 0.59 FALSE
PL RGD1359108 mRNA stability ENSRNOG00000009478 0.08 1 0.05 2.0e-04 5.22 1.78e-07 0.05 FALSE