Hub : Traits : Pavlov. Cond. change in total contacts : ← : →

chr1:154,277,716-157,352,620

Trait: Pavlov. Cond. change in total contacts

Best TWAS P=9.08e-08 · Best GWAS P=1.52e-07 conditioned to 1e+00

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Mrpl48	alternative polyA	ENSRNOT00000024290	0.05	9	0.04	2.2e-05	-5.19	2.14e-07	0.04	TRUE
Adipose	P2ry2	alternative polyA	ENSRNOT00000026115	0.03	1	0.02	4.7e-03	-5.17	2.36e-07	0.05	FALSE
Adipose	P2ry2	alternative polyA	ENSRNOT00000114931	0.03	1	0.02	4.4e-03	5.17	2.36e-07	0.05	FALSE
Adipose	Mrpl48	alternative TSS	ENSRNOT00000024290	0.08	1	0.06	1.7e-07	-5.25	1.52e-07	0.01	FALSE
Adipose	Mrpl48	alternative TSS	ENSRNOT00000097667	0.08	1	0.06	1.2e-07	5.25	1.52e-07	0.01	FALSE
Adipose	Mrpl48	alternative TSS	ENSRNOT00000024290	0.08	1	0.06	1.1e-07	-5.25	1.52e-07	0.01	FALSE
Adipose	Mrpl48	alternative TSS	ENSRNOT00000097667	0.08	1	0.06	1.4e-07	5.25	1.52e-07	0.01	FALSE
Adipose	Clpb	gene expression	ENSRNOG00000019693	0.16	1569	0.11	1.9e-12	5.3	1.15e-07	0.68	FALSE
Adipose	Arap1	mRNA stability	ENSRNOG00000019555	0.06	1	0.03	4.4e-04	-5.16	2.53e-07	0.23	TRUE
Brain	Clpb	gene expression	ENSRNOG00000019693	0.59	1569	0.62	2.7e-72	5.16	2.52e-07	0.06	FALSE
Brain	Numa1	mRNA stability	ENSRNOG00000000417	0.34	1574	0.3	2.8e-28	5.28	1.31e-07	0.69	FALSE
IL	Inppl1	intron excision ratio	chr1:156186418:156186665	0.3	6	0.05	2.9e-02	5.26	1.47e-07	0.29	FALSE
Liver	Mrpl48	alternative polyA	ENSRNOT00000024290	0.03	1	0.02	2.3e-03	5.16	2.53e-07	0.08	FALSE
Liver	Mrpl48	alternative polyA	ENSRNOT00000110624	0.04	1	0.02	1.7e-03	-5.16	2.53e-07	0.1	FALSE
Liver	Mrpl48	alternative polyA	ENSRNOT00000024290	0.05	1	0.03	7.8e-04	5.16	2.53e-07	0.15	FALSE
Liver	Mrpl48	alternative polyA	ENSRNOT00000110624	0.06	1	0.03	5.6e-04	-5.16	2.53e-07	0.2	FALSE
Liver	Atg16l2	gene expression	ENSRNOG00000019413	0.02	1649	0.01	5.5e-02	-5.34	9.50e-08	0.46	FALSE
Liver	Nup98	gene expression	ENSRNOG00000020347	0.22	1360	0.08	1.2e-09	5.14	2.80e-07	0.75	FALSE
Liver	Pgap2	gene expression	ENSRNOG00000020371	0.47	27	0.36	4.3e-42	5.19	2.12e-07	0.78	FALSE
Liver	Rhog	gene expression	ENSRNOG00000020393	0.21	1398	0.14	1.7e-15	5.22	1.83e-07	0.77	FALSE
Liver	Stim1	gene expression	ENSRNOG00000020425	0.54	53	0.38	3.5e-44	5.23	1.69e-07	0.77	FALSE
Liver	Numa1	mRNA stability	ENSRNOG00000000417	0.04	3	0.02	4.6e-03	5.17	2.30e-07	0.61	TRUE
Liver	Atg16l2	mRNA stability	ENSRNOG00000019413	0.04	1649	0	8.8e-02	-5.34	9.08e-08	0.58	TRUE
Liver	Pgap2	mRNA stability	ENSRNOG00000020371	0.04	1358	0.02	4.5e-03	5.24	1.64e-07	0.67	FALSE
NAcc	Arap1	gene expression	ENSRNOG00000019555	0.07	1	0.05	9.2e-05	5.25	1.52e-07	0.29	FALSE
PL	Numa1	mRNA stability	ENSRNOG00000000417	0.21	1571	0.15	1.3e-11	5.31	1.08e-07	0.68	FALSE