Best TWAS P=2.27994e-07 · Best GWAS P=1.65407e-06 conditioned to 1
# | Tissue | Gene | Modality | RNA phenotype | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | PL | Uvrag | gene expression | ENSRNOG00000016206 | 0.14 | 0.04 | enet | 64 | 0.07 | 1e-05 | -4.8 | 5.2 | 2.3e-07 | -0.99 | 0.43 | 0.56 | TRUE |
h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.