chr19:22,565,390-24,944,067

Trait: Light reinforcement 1

Best TWAS P=2.64e-08 · Best GWAS P=2.64e-08 conditioned to 1e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose LOC120098581 alternative TSS XM_039098179.1 0.05 12 0.02 3.7e-03 5.44 5.33e-08 0.82 TRUE
Adipose Dhps gene expression Dhps 0.09 2 0.08 3.0e-09 5.32 1.05e-07 0.94 FALSE
Adipose Prdx2 gene expression Prdx2 0.08 1 0.07 4.0e-08 5.37 7.95e-08 0.84 FALSE
BLA MAST1 gene expression MAST1 0.14 56 0.05 8.3e-04 -5.36 8.13e-08 0.87 TRUE
BLA Mri1 gene expression Mri1 0.29 3 0.24 4.7e-13 5.33 9.64e-08 0.8 TRUE
BLA Brme1 mRNA stability Brme1 0.11 1 0.07 2.0e-04 5.5 3.87e-08 0.28 FALSE
Brain Gcdh gene expression Gcdh 0.52 22 0.55 2.3e-60 -5.19 2.12e-07 0.89 FALSE
Brain Nacc1 mRNA stability Nacc1 0.03 1202 0.02 2.8e-03 5.3 1.13e-07 0.7 FALSE
IL LOC102555451 gene expression LOC102555451 0.53 10 0.28 2.1e-07 5.19 2.12e-07 0.82 FALSE
Liver Adgrl1 alternative TSS XM_039097967.1 0.03 1 0.03 5.3e-04 5.43 5.75e-08 0.18 FALSE
Liver Gcdh gene expression Gcdh 0.5 15 0.34 2.7e-39 -5.45 5.15e-08 0.89 FALSE
Liver Get3 gene expression Get3 0.04 1 0.01 9.1e-03 -5.31 1.09e-07 0.04 TRUE
Liver Wdr83os gene expression Wdr83os 0.17 1 0.12 1.3e-13 -5.31 1.09e-07 0.86 FALSE
Liver Syce2 mRNA stability Syce2 0.11 133 0.09 1.1e-09 -5.48 4.34e-08 0.88 FALSE
NAcc LOC120098586 gene expression LOC120098586 0.04 1 0.03 3.0e-04 5.55 2.82e-08 0.37 FALSE
NAcc Mri1 gene expression Mri1 0.22 8 0.19 2.3e-21 5.54 2.94e-08 0.85 FALSE
NAcc Gcdh intron excision ratio chr19_23263340_23263398 0.04 1 0.04 3.5e-05 5.5 3.87e-08 0.5 FALSE
NAcc Gcdh intron excision ratio chr19_23263527_23263608 0.04 1 0.04 2.4e-05 -5.55 2.82e-08 0.62 FALSE
NAcc Gadd45gip1 mRNA stability Gadd45gip1 0.06 1 0.03 7.0e-05 5.55 2.82e-08 0.62 FALSE
NAcc Gcdh mRNA stability Gcdh 0.05 777 0.03 4.3e-04 5.18 2.16e-07 0.84 FALSE
OFC Mri1 gene expression Mri1 0.27 1 0.07 8.4e-03 -5.56 2.64e-08 0.09 TRUE
OFC Gcdh intron excision ratio chr19_23264057_23264177 0.22 777 0.01 2.0e-01 5.38 7.27e-08 0.36 FALSE
PL C19h19orf53 gene expression C19h19orf53 0.06 1 0.05 4.5e-06 -5.41 6.25e-08 0.76 FALSE
PL LOC102555451 gene expression LOC102555451 0.3 127 0.26 5.9e-29 -5.3 1.18e-07 0.88 FALSE
PL Mri1 gene expression Mri1 0.13 1522 0.11 1.7e-12 5.26 1.41e-07 0.79 FALSE
PL Gadd45gip1 mRNA stability Gadd45gip1 0.12 144 0.09 5.5e-10 5.19 2.08e-07 0.8 FALSE