Best TWAS P=5.32e-08 · Best GWAS P=2.28e-08 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Folr1 | gene expression | ENSRNOG00000019902 | 0.62 | 422 | 0.51 | 1.4e-64 | -5.19 | 2.14e-07 | 0.68 | FALSE |
Adipose | Rnf121 | gene expression | ENSRNOG00000020175 | 0.05 | 1540 | 0.02 | 4.3e-03 | -5.42 | 6.01e-08 | 0.54 | FALSE |
Adipose | Nup98 | gene expression | ENSRNOG00000020347 | 0.21 | 1360 | 0.16 | 6.8e-17 | -5.33 | 9.85e-08 | 0.54 | FALSE |
Adipose | Trim68 | isoform ratio | ENSRNOT00000095839 | 0.19 | 30 | 0.22 | 3.8e-24 | 5.42 | 5.94e-08 | 0.38 | FALSE |
Adipose | ENSRNOG00000064417 | isoform ratio | ENSRNOT00000105061 | 0.08 | 164 | 0.03 | 2.6e-04 | 5.15 | 2.67e-07 | 0.69 | FALSE |
Adipose | Trim21 | mRNA stability | ENSRNOG00000018517 | 0.09 | 2047 | 0.09 | 9.5e-10 | -5.32 | 1.01e-07 | 0.35 | FALSE |
Adipose | Il18bp | mRNA stability | ENSRNOG00000020150 | 0.12 | 1 | 0.08 | 4.5e-09 | -5.16 | 2.42e-07 | 0.71 | FALSE |
BLA | Folr2 | gene expression | ENSRNOG00000019890 | 0.12 | 1566 | 0.04 | 4.1e-03 | -5.3 | 1.14e-07 | 0.4 | FALSE |
BLA | Il18bp | gene expression | ENSRNOG00000020150 | 0.13 | 1563 | 0.04 | 3.6e-03 | -5.29 | 1.22e-07 | 0.38 | FALSE |
BLA | Pgap2 | gene expression | ENSRNOG00000020371 | 0.09 | 1361 | 0.06 | 5.8e-04 | 5.11 | 3.18e-07 | 0.2 | FALSE |
BLA | Trim68 | isoform ratio | ENSRNOT00000095839 | 0.19 | 15 | 0.14 | 4.0e-08 | 5.16 | 2.45e-07 | 0.48 | FALSE |
BLA | Trim68 | intron excision ratio | chr1:157118269:157120638 | 0.1 | 16 | 0.04 | 3.5e-03 | -5.16 | 2.47e-07 | 0.26 | FALSE |
BLA | Nup98 | mRNA stability | ENSRNOG00000020347 | 0.13 | 23 | 0.06 | 5.8e-04 | 5.12 | 2.99e-07 | 0.52 | FALSE |
BLA | Hbb-bs | mRNA stability | ENSRNOG00000061299 | 0.17 | 3262 | 0.15 | 1.2e-08 | -5.15 | 2.66e-07 | 0.32 | FALSE |
Brain | Atg16l2 | gene expression | ENSRNOG00000019413 | 0.05 | 10 | 0.04 | 1.5e-04 | -5.41 | 6.45e-08 | 0.48 | FALSE |
Brain | Inppl1 | gene expression | ENSRNOG00000019730 | 0.1 | 309 | 0.08 | 4.1e-08 | -5.28 | 1.27e-07 | 0.66 | FALSE |
Brain | Folr2 | gene expression | ENSRNOG00000019890 | 0.04 | 7 | 0.03 | 6.3e-04 | -5.18 | 2.18e-07 | 0.58 | FALSE |
Brain | Lrrc51 | gene expression | ENSRNOG00000020124 | 0.04 | 1592 | 0.02 | 3.6e-03 | 5.21 | 1.87e-07 | 0.29 | FALSE |
Brain | Rnf121 | gene expression | ENSRNOG00000020175 | 0.09 | 1540 | 0.06 | 2.0e-06 | -5.19 | 2.10e-07 | 0.13 | FALSE |
Brain | Trpc2 | gene expression | ENSRNOG00000020188 | 0.09 | 1523 | 0.07 | 8.5e-07 | 5.32 | 1.05e-07 | 0.34 | FALSE |
Brain | Stim1 | gene expression | ENSRNOG00000020425 | 0.04 | 1413 | 0.04 | 6.3e-05 | 5.43 | 5.59e-08 | 0.59 | FALSE |
Brain | Olr61 | gene expression | ENSRNOG00000071207 | 0.09 | 2309 | 0.12 | 6.2e-11 | -5.28 | 1.29e-07 | 0.52 | FALSE |
Brain | Trim68 | isoform ratio | ENSRNOT00000075222 | 0.34 | 196 | 0.43 | 7.6e-43 | 5.23 | 1.67e-07 | 0.22 | TRUE |
Brain | Trim68 | isoform ratio | ENSRNOT00000092838 | 0.54 | 231 | 0.48 | 1.3e-49 | -5.27 | 1.38e-07 | 0.24 | FALSE |
Brain | Trim68 | isoform ratio | ENSRNOT00000095839 | 0.19 | 2208 | 0.24 | 4.6e-22 | 5.33 | 9.58e-08 | 0.35 | FALSE |
Brain | Trpc2 | intron excision ratio | chr1:156450846:156452614 | 0.12 | 1 | 0.08 | 8.7e-08 | -5.18 | 2.24e-07 | 0.72 | FALSE |
Brain | Fchsd2 | mRNA stability | ENSRNOG00000019319 | 0.1 | 23 | 0.1 | 6.9e-10 | -5.43 | 5.52e-08 | 0.64 | TRUE |
Eye | Trim68 | isoform ratio | ENSRNOT00000075222 | 0.5 | 1 | 0.12 | 6.3e-03 | 5.36 | 8.48e-08 | 0.06 | FALSE |
IL | Trim68 | isoform ratio | ENSRNOT00000092838 | 0.19 | 5 | 0.13 | 4.3e-04 | -5.33 | 9.70e-08 | 0.37 | FALSE |
LHb | Hbb-b1 | isoform ratio | ENSRNOT00000089125 | 0.67 | 14 | 0.5 | 8.4e-14 | 5.1 | 3.43e-07 | 0.31 | TRUE |
LHb | Hbb-b1 | intron excision ratio | chr1:158218619:158219259 | 0.43 | 3232 | 0.07 | 1.1e-02 | 5.12 | 3.06e-07 | 0.23 | TRUE |
LHb | Hbb-b1 | intron excision ratio | chr1:158237229:158237869 | 0.25 | 2 | 0.07 | 8.3e-03 | -5.31 | 1.10e-07 | 0.35 | FALSE |
Liver | Folr1 | gene expression | ENSRNOG00000019902 | 0.05 | 1 | 0.02 | 4.4e-03 | -5.16 | 2.42e-07 | 0.05 | TRUE |
Liver | Il18bp | gene expression | ENSRNOG00000020150 | 0.26 | 368 | 0.14 | 1.6e-15 | -5.27 | 1.38e-07 | 0.69 | FALSE |
Liver | Rnf121 | gene expression | ENSRNOG00000020175 | 0.05 | 1540 | 0.01 | 1.5e-02 | -5.17 | 2.38e-07 | 0.29 | FALSE |
Liver | Art2b | isoform ratio | ENSRNOT00000026644 | 0.03 | 1534 | 0.01 | 1.6e-02 | 5.37 | 7.68e-08 | 0.43 | FALSE |
Liver | Trpc2 | intron excision ratio | chr1:156450846:156452614 | 0.05 | 212 | 0.03 | 4.5e-04 | -5.1 | 3.36e-07 | 0.63 | FALSE |
Liver | Nup98 | intron excision ratio | chr1:156575961:156590985 | 0.02 | 1 | 0.02 | 5.4e-03 | 5.15 | 2.57e-07 | 0.03 | FALSE |
Liver | Nup98 | intron excision ratio | chr1:156575961:156591264 | 0.02 | 1360 | 0.01 | 1.3e-02 | -5.39 | 7.17e-08 | 0.3 | FALSE |
Liver | Pde2a | mRNA stability | ENSRNOG00000019560 | 0.05 | 1630 | 0.02 | 1.2e-03 | -5.2 | 2.01e-07 | 0.49 | FALSE |
NAcc | Il18bp | gene expression | ENSRNOG00000020150 | 0.05 | 1 | 0.03 | 2.1e-03 | -5.18 | 2.24e-07 | 0.05 | FALSE |
NAcc | Trpc2 | gene expression | ENSRNOG00000020188 | 0.07 | 1 | 0.04 | 4.1e-04 | 5.18 | 2.24e-07 | 0.08 | FALSE |
NAcc | Hbb-b1 | gene expression | ENSRNOG00000047098 | 0.06 | 3252 | 0.04 | 3.5e-04 | 5.15 | 2.65e-07 | 0.35 | FALSE |
NAcc | Trim68 | isoform ratio | ENSRNOT00000095839 | 0.21 | 2201 | 0.2 | 1.1e-14 | 5.22 | 1.83e-07 | 0.51 | FALSE |
NAcc | Trim68 | intron excision ratio | chr1:157115748:157116120 | 0.03 | 2201 | 0.02 | 1.0e-02 | -5.44 | 5.32e-08 | 0.33 | TRUE |
NAcc | Trim68 | intron excision ratio | chr1:157116858:157118174 | 0.06 | 1 | 0.06 | 3.5e-05 | -5.19 | 2.09e-07 | 0.26 | FALSE |
NAcc | Trim68 | intron excision ratio | chr1:157118269:157120638 | 0.08 | 2201 | 0.07 | 8.2e-06 | -5.24 | 1.60e-07 | 0.48 | FALSE |
NAcc | Hbb-bs | mRNA stability | ENSRNOG00000061299 | 0.34 | 35 | 0.29 | 1.6e-21 | -5.24 | 1.59e-07 | 0.24 | TRUE |
OFC | Numa1 | gene expression | ENSRNOG00000000417 | 0.33 | 1569 | 0.03 | 6.1e-02 | -5.12 | 3.10e-07 | 0.17 | FALSE |
OFC | Olr61 | gene expression | ENSRNOG00000071207 | 0.13 | 1 | 0.13 | 4.5e-04 | -5.28 | 1.32e-07 | 0.05 | FALSE |
OFC | Trim68 | isoform ratio | ENSRNOT00000095839 | 0.28 | 2197 | 0.06 | 1.8e-02 | 5.35 | 8.57e-08 | 0.47 | FALSE |
PL | Atg16l2 | gene expression | ENSRNOG00000019413 | 0.21 | 1 | 0.16 | 2.7e-12 | -5.25 | 1.53e-07 | 0.9 | FALSE |
PL | Trim68 | isoform ratio | ENSRNOT00000095839 | 0.18 | 2201 | 0.25 | 4.2e-19 | 5.28 | 1.26e-07 | 0.25 | FALSE |
PL | Trim68 | intron excision ratio | chr1:157115748:157116120 | 0.05 | 1 | 0.04 | 2.4e-04 | -5.17 | 2.32e-07 | 0.1 | FALSE |