Hub : Traits : Tail length : ← →

chr2:34,186,973-35,996,814

Trait: Tail length

Best TWAS P=1.713906e-07 · Best GWAS P=1.231955e-07 conditioned to 1

Associated models

#	Tissue	Gene	Modality	RNA phenotype	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	Adipose	Trappc13	alternative polyA	ENSRNOT00000016439	0.04	0.04	top1	1	0.04	3.2e-05	5.1	-5.1	3.1e-07	-0.97	0.10	0.18	FALSE
2	Adipose	Trappc13	alternative polyA	ENSRNOT00000110804	0.04	0.04	top1	1	0.04	3.7e-05	5.1	5.1	3.1e-07	0.97	0.10	0.18	FALSE
3	Adipose	Trim23	gene expression	ENSRNOG00000012354	0.09	0.03	blup	873	0.03	1.5e-04	5.1	5.1	3.1e-07	0.99	0.40	0.59	FALSE
4	BLA	Trim23	alternative polyA	ENSRNOT00000016649	0.08	0.05	top1	1	0.04	1.9e-03	-5.1	5.1	3.2e-07	0.98	0.06	0.08	FALSE
5	BLA	Trim23	alternative polyA	ENSRNOT00000106700	0.08	0.05	top1	1	0.05	1.1e-03	-5.1	-5.1	3.2e-07	-0.98	0.06	0.09	FALSE
6	BLA	Srek1	gene expression	ENSRNOG00000032735	0.06	0.02	enet	48	0.03	7.4e-03	5.0	5.1	3.4e-07	0.97	0.41	0.39	FALSE
7	IL	Nln	isoform ratio	ENSRNOT00000066925	0.19	0.06	enet	6	0.08	7.0e-03	5.2	5.1	3.5e-07	0.98	0.40	0.39	FALSE
8	IL	Nln	isoform ratio	ENSRNOT00000082755	0.18	0.05	enet	5	0.07	8.3e-03	4.9	-5.1	3.5e-07	-0.98	0.40	0.38	FALSE
9	IL	Sgtb	mRNA stability	ENSRNOG00000011937	0.17	0.05	top1	1	0.05	2.2e-02	5.1	5.1	2.7e-07	0.98	0.06	0.06	FALSE
10	NAcc	Trappc13	gene expression	ENSRNOG00000012124	0.07	0.10	top1	1	0.10	1.4e-07	5.2	-5.2	2.0e-07	-0.97	0.20	0.58	FALSE
11	NAcc	Srek1	gene expression	ENSRNOG00000032735	0.06	0.03	top1	1	0.03	2.1e-03	5.1	5.1	3.2e-07	1.00	0.07	0.09	FALSE
12	NAcc	Nln	isoform ratio	ENSRNOT00000066925	0.04	0.02	top1	1	0.02	9.6e-03	5.2	5.2	1.7e-07	0.98	0.04	0.05	TRUE
13	NAcc	Nln	isoform ratio	ENSRNOT00000082755	0.04	0.02	top1	1	0.02	8.3e-03	5.2	-5.2	1.7e-07	-0.98	0.04	0.06	FALSE
14	NAcc	Erbin	mRNA stability	ENSRNOG00000047137	0.04	0.05	top1	1	0.04	2.5e-04	5.1	5.1	3.3e-07	0.99	0.06	0.08	FALSE
15	PL	Nln	gene expression	ENSRNOG00000011561	0.05	0.04	top1	1	0.04	5.2e-04	5.2	5.2	2.3e-07	0.99	0.05	0.07	FALSE
16	PL	Trappc13	gene expression	ENSRNOG00000012124	0.17	0.04	enet	4	0.05	6.6e-05	5.1	-5.1	2.7e-07	-0.97	0.39	0.60	FALSE
17	PL	Srek1	gene expression	ENSRNOG00000032735	0.08	0.06	enet	65	0.06	1.4e-05	5.0	5.1	3.5e-07	0.99	0.49	0.50	FALSE

h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.