chr9:65,337,960-67,262,437

Trait: BMI with tail

Best TWAS P=2.70e-08 · Best GWAS P=3.33e-08 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Plekhm3 mRNA stability Plekhm3 0.02 11 0.02 2.1e-03 -5.29 1.26e-07 0.39 FALSE
BLA Cryga gene expression Cryga 0.04 1234 0.03 1.7e-02 -5.56 2.70e-08 0.41 TRUE
Brain Pikfyve gene expression Pikfyve 0.07 1 0.05 8.2e-06 5.49 4.11e-08 0.57 FALSE
Brain Plekhm3 gene expression Plekhm3 0.04 1338 0.04 6.5e-05 5.39 6.90e-08 0.5 FALSE
Brain Cryga intron excision ratio chr9_66453498_66490303 0.04 1 0.03 5.8e-04 -5.49 4.11e-08 0.1 FALSE
Brain Crygc intron excision ratio chr9_66453498_66490303 0.04 1 0.03 5.8e-04 -5.49 4.11e-08 0.1 FALSE
Brain Mettl21a mRNA stability Mettl21a 0.04 1324 0.04 1.3e-04 5.19 2.08e-07 0.32 FALSE
Eye Pikfyve gene expression Pikfyve 0.61 1628 0.34 3.0e-06 -5.56 2.77e-08 0.33 FALSE
IL Fzd5 gene expression Fzd5 0.19 15 0.08 6.8e-03 -5.27 1.34e-07 0.32 FALSE
LHb Mettl21a gene expression Mettl21a 0.22 1324 0.15 2.2e-04 5.23 1.71e-07 0.31 FALSE
Liver Ccnyl1 gene expression Ccnyl1 0.02 1306 0.01 3.3e-02 5.3 1.15e-07 0.29 FALSE
Liver Mettl21a intron excision ratio chr9_65985095_65986197 0.04 58 0.03 4.6e-04 -5.29 1.21e-07 0.41 FALSE
NAcc LOC120094695 gene expression LOC120094695 0.19 53 0.02 1.4e-03 5.25 1.51e-07 0.45 FALSE
NAcc Plekhm3 gene expression Plekhm3 0.05 1338 0.05 8.9e-07 5.25 1.50e-07 0.53 FALSE
PL Fzd5 gene expression Fzd5 0.06 1274 0.05 2.0e-06 -5.33 9.70e-08 0.47 FALSE
PL Plekhm3 gene expression Plekhm3 0.02 1338 0.02 3.1e-03 5.47 4.42e-08 0.41 FALSE
PL Cryga intron excision ratio chr9_66453498_66490303 0.02 1234 0.02 2.0e-03 5.29 1.20e-07 0.47 FALSE
PL Cryga intron excision ratio chr9_66486750_66490303 0.1 1234 0.12 8.0e-13 -5.47 4.42e-08 0.55 FALSE
PL Crygc intron excision ratio chr9_66453498_66490303 0.02 1233 0.02 2.0e-03 5.3 1.16e-07 0.47 FALSE
PL Crygc intron excision ratio chr9_66486750_66490303 0.1 1233 0.12 8.1e-13 -5.48 4.33e-08 0.55 FALSE
PL Idh1 mRNA stability Idh1 0.02 1 0.01 4.3e-02 5.33 1.01e-07 0.03 FALSE
pVTA Pikfyve gene expression Pikfyve 0.09 1 0.1 6.0e-05 5.25 1.54e-07 0.06 FALSE
pVTA Cryga intron excision ratio chr9_66453498_66490303 0.17 30 0.21 1.8e-09 5.42 5.82e-08 0.56 FALSE
pVTA Crygc intron excision ratio chr9_66453498_66490303 0.18 25 0.21 1.7e-09 5.42 5.87e-08 0.56 FALSE