Best TWAS P=1.27e-08 · Best GWAS P=3.33e-08 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
BLA | Mettl21a | gene expression | ENSRNOG00000014212 | 0.07 | 1295 | 0.04 | 2.1e-03 | 5.11 | 3.20e-07 | 0.39 | FALSE |
BLA | Plekhm3 | gene expression | ENSRNOG00000023760 | 0.05 | 1335 | 0.01 | 4.9e-02 | 5.43 | 5.71e-08 | 0.42 | FALSE |
BLA | Cryga | intron excision ratio | chr9:66486750:66490303 | 0.16 | 1325 | 0.17 | 2.7e-09 | -5.09 | 3.53e-07 | 0.5 | FALSE |
Brain | Cryga | alternative TSS | ENSRNOT00000019963 | 0.04 | 27 | 0.05 | 1.2e-05 | 5.42 | 5.91e-08 | 0.54 | FALSE |
Brain | Cryga | alternative TSS | ENSRNOT00000072983 | 0.04 | 25 | 0.05 | 1.5e-05 | -5.43 | 5.56e-08 | 0.54 | FALSE |
Brain | Mettl21a | gene expression | ENSRNOG00000014212 | 0.05 | 329 | 0.04 | 2.0e-04 | 5.56 | 2.68e-08 | 0.48 | FALSE |
Brain | Idh1 | gene expression | ENSRNOG00000015020 | 0.02 | 1 | 0.02 | 4.1e-03 | 5.31 | 1.07e-07 | 0.04 | FALSE |
Brain | Pikfyve | gene expression | ENSRNOG00000015158 | 0.05 | 61 | 0.06 | 2.3e-06 | -5.47 | 4.52e-08 | 0.54 | FALSE |
Brain | Cryga | intron excision ratio | chr9:66486750:66490303 | 0.16 | 33 | 0.16 | 2.8e-14 | -5.19 | 2.09e-07 | 0.5 | FALSE |
IL | Fzd5 | gene expression | ENSRNOG00000014678 | 0.17 | 1 | 0.07 | 1.0e-02 | -5.49 | 4.11e-08 | 0.06 | FALSE |
LHb | Mettl21a | gene expression | ENSRNOG00000014212 | 0.16 | 3 | 0.13 | 5.5e-04 | 5.3 | 1.15e-07 | 0.26 | FALSE |
Liver | Mettl21a | gene expression | ENSRNOG00000014212 | 0.06 | 135 | 0.04 | 4.5e-05 | 5.1 | 3.41e-07 | 0.44 | FALSE |
Liver | Fzd5 | gene expression | ENSRNOG00000014678 | 0.05 | 1271 | 0.03 | 1.1e-04 | 5.29 | 1.22e-07 | 0.44 | FALSE |
Liver | Idh1 | isoform ratio | ENSRNOT00000020322 | 0.03 | 1626 | 0 | 9.8e-02 | -5.6 | 2.11e-08 | 0.36 | FALSE |
Liver | Idh1 | isoform ratio | ENSRNOT00000108404 | 0.03 | 1626 | 0.01 | 6.4e-02 | 5.62 | 1.93e-08 | 0.39 | FALSE |
NAcc | Fzd5 | gene expression | ENSRNOG00000014678 | 0.09 | 557 | 0.04 | 1.1e-03 | -5.69 | 1.27e-08 | 0.52 | TRUE |
OFC | Mettl21a | gene expression | ENSRNOG00000014212 | 0.13 | 1 | 0.09 | 4.1e-03 | 5.12 | 3.07e-07 | 0.05 | FALSE |
PL | Fzd5 | gene expression | ENSRNOG00000014678 | 0.08 | 1270 | 0.08 | 2.2e-06 | -5.32 | 1.05e-07 | 0.45 | FALSE |
PL | Cryga | gene expression | ENSRNOG00000046343 | 0.12 | 1324 | 0.08 | 1.1e-06 | -5.19 | 2.08e-07 | 0.5 | FALSE |
PL | Cryga | intron excision ratio | chr9:66486750:66490303 | 0.09 | 1324 | 0.12 | 2.6e-09 | -5.38 | 7.43e-08 | 0.52 | FALSE |
PL | Idh1 | mRNA stability | ENSRNOG00000015020 | 0.03 | 1 | 0.01 | 5.1e-02 | -5.33 | 1.01e-07 | 0.04 | FALSE |