Best TWAS P=1.78e-08 · Best GWAS P=4.96e-09 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Cep112 | intron excision ratio | chr10:93731914:93738578 | 0.06 | 1 | 0.04 | 4.2e-05 | 5.55 | 2.85e-08 | 0.25 | FALSE |
BLA | Axin2 | gene expression | ENSRNOG00000055010 | 0.07 | 1 | 0.08 | 4.9e-05 | -5.13 | 2.97e-07 | 0.05 | FALSE |
Brain | Prkca | gene expression | ENSRNOG00000003491 | 0.12 | 1 | 0.08 | 4.3e-08 | -5.63 | 1.78e-08 | 0.74 | TRUE |
Brain | AABR07030647.1 | gene expression | ENSRNOG00000033613 | 0.07 | 1 | 0.09 | 2.0e-08 | 5.37 | 7.84e-08 | 0.61 | FALSE |
IL | Amz2 | gene expression | ENSRNOG00000000246 | 0.32 | 2767 | 0.17 | 6.0e-05 | 5.13 | 2.85e-07 | 0.65 | FALSE |
IL | Axin2 | gene expression | ENSRNOG00000055010 | 0.32 | 2027 | 0.23 | 3.1e-06 | -5.34 | 9.46e-08 | 0.51 | FALSE |
LHb | Cep112 | gene expression | ENSRNOG00000024557 | 0.35 | 1 | 0.25 | 1.5e-06 | -5.58 | 2.35e-08 | 0.13 | FALSE |
Liver | Cep112 | isoform ratio | ENSRNOT00000037067 | 0.03 | 1 | 0.02 | 2.3e-03 | 5.57 | 2.51e-08 | 0.05 | FALSE |
Liver | Apoh | mRNA stability | ENSRNOG00000003566 | 0.27 | 72 | 0.27 | 2.3e-29 | 5.61 | 1.98e-08 | 0.7 | FALSE |
NAcc | Cep112 | alternative TSS | ENSRNOT00000108519 | 0.13 | 1 | 0.11 | 1.2e-08 | -5.56 | 2.63e-08 | 0.63 | FALSE |
NAcc | Cep112 | gene expression | ENSRNOG00000024557 | 0.06 | 1 | 0.07 | 1.1e-05 | -5.48 | 4.19e-08 | 0.2 | FALSE |
NAcc | Cep112 | isoform ratio | ENSRNOT00000108519 | 0.14 | 2251 | 0.12 | 2.5e-09 | -5.53 | 3.26e-08 | 0.66 | FALSE |
NAcc | Wipi1 | mRNA stability | ENSRNOG00000003827 | 0.06 | 1 | 0.02 | 6.2e-03 | 5.48 | 4.14e-08 | 0.12 | FALSE |
PL | Rgs9 | alternative polyA | ENSRNOT00000096063 | 0.04 | 1 | 0.02 | 9.1e-03 | -5.15 | 2.60e-07 | 0.04 | FALSE |
PL | Cep112 | gene expression | ENSRNOG00000024557 | 0.14 | 1 | 0.1 | 2.4e-08 | -5.48 | 4.19e-08 | 0.52 | FALSE |
PL | Rgs9 | isoform ratio | ENSRNOT00000005076 | 0.06 | 1 | 0.03 | 1.4e-03 | 5.14 | 2.77e-07 | 0.08 | FALSE |
PL | Rgs9 | isoform ratio | ENSRNOT00000096063 | 0.04 | 1 | 0.02 | 6.4e-03 | -5.15 | 2.60e-07 | 0.04 | FALSE |