chr15:43,349,498-46,640,839

Trait: Tibialis anterior weight

Best TWAS P=3.72e-08 · Best GWAS P=3.72e-08 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Pdlim2 gene expression ENSRNOG00000008543 0.04 172 0.02 9.3e-04 5.34 9.50e-08 0.56 FALSE
Adipose Piwil2 gene expression ENSRNOG00000009871 0.04 1 0.02 3.1e-03 5.29 1.21e-07 0.05 FALSE
Adipose Polr3d gene expression ENSRNOG00000010028 0.07 246 0.06 8.3e-07 -5.31 1.09e-07 0.63 FALSE
Adipose Bmp1 gene expression ENSRNOG00000010890 0.05 1 0.05 1.1e-06 -5.28 1.29e-07 0.59 FALSE
Adipose Fhip2b gene expression ENSRNOG00000012014 0.02 12 0.01 2.8e-02 5.35 8.57e-08 0.56 FALSE
Adipose Dmtn gene expression ENSRNOG00000012273 0.17 1 0.2 1.7e-21 5.32 1.05e-07 0.69 FALSE
Adipose Slc25a37 gene expression ENSRNOG00000015495 0.02 52 0.01 8.5e-03 5.32 1.04e-07 0.47 FALSE
Adipose Loxl2 gene expression ENSRNOG00000016758 0.02 1 0.01 1.9e-02 5.3 1.17e-07 0.03 FALSE
Adipose R3hcc1 gene expression ENSRNOG00000016777 0.15 1 0.09 8.5e-10 -5.28 1.29e-07 0.69 FALSE
Adipose Chmp7 gene expression ENSRNOG00000016939 0.38 263 0.35 9.9e-40 5.26 1.47e-07 0.69 FALSE
Adipose Rhobtb2 gene expression ENSRNOG00000017373 0.36 182 0.33 1.9e-37 5.31 1.12e-07 0.67 FALSE
Adipose Tnfrsf10b gene expression ENSRNOG00000038483 0.16 1 0.14 1.7e-15 5.18 2.24e-07 0.54 FALSE
Adipose Fhip2b isoform ratio ENSRNOT00000097198 0.02 1 0.01 3.6e-02 5.32 1.05e-07 0.04 FALSE
Adipose Bin3 isoform ratio ENSRNOT00000024614 0.06 214 0.05 4.2e-06 5.33 9.90e-08 0.59 FALSE
Adipose Bin3 isoform ratio ENSRNOT00000099631 0.07 174 0.05 1.2e-06 -5.33 9.85e-08 0.59 FALSE
Adipose R3hcc1 mRNA stability ENSRNOG00000016777 0.28 1 0.17 1.7e-18 -5.28 1.29e-07 0.69 FALSE
BLA Ppp3cc alternative polyA ENSRNOT00000082505 0.07 639 0.03 1.6e-02 5.29 1.23e-07 0.42 FALSE
BLA Ppp3cc alternative polyA ENSRNOT00000091826 0.07 639 0.02 1.9e-02 -5.29 1.23e-07 0.41 FALSE
BLA Sorbs3 alternative TSS ENSRNOT00000012056 0.12 711 0.06 4.5e-04 -5.29 1.23e-07 0.55 FALSE
BLA Sorbs3 alternative TSS ENSRNOT00000113720 0.12 711 0.06 5.1e-04 5.29 1.23e-07 0.55 FALSE
BLA Sorbs3 gene expression ENSRNOG00000008829 0.07 1 0.04 3.5e-03 -5.23 1.66e-07 0.04 FALSE
BLA Ppp3cc gene expression ENSRNOG00000009745 0.51 639 0.31 6.4e-17 5.29 1.20e-07 0.61 FALSE
BLA Polr3d gene expression ENSRNOG00000010028 0.11 588 0.03 1.2e-02 -5.28 1.26e-07 0.58 FALSE
BLA Lgi3 gene expression ENSRNOG00000011323 0.14 161 0.08 3.1e-05 -5.31 1.07e-07 0.65 FALSE
BLA Dmtn gene expression ENSRNOG00000012273 0.24 1 0.21 1.8e-11 -5.5 3.72e-08 0.86 TRUE
BLA R3hcc1 gene expression ENSRNOG00000016777 0.15 136 0.08 4.0e-05 5.27 1.38e-07 0.69 FALSE
BLA Rhobtb2 gene expression ENSRNOG00000017373 0.18 528 0.08 4.5e-05 5.28 1.26e-07 0.65 FALSE
BLA Ccar2 gene expression ENSRNOG00000018295 0.11 1 0.06 4.0e-04 5.5 3.72e-08 0.11 FALSE
BLA Phyhip intron excision ratio chr15:45535048:45538056 0.08 572 0.04 5.0e-03 -5.28 1.28e-07 0.46 FALSE
BLA Dmtn intron excision ratio chr15:45694169:45704328 0.05 1 0.02 3.2e-02 -5.21 1.92e-07 0.04 FALSE
BLA Ppp3cc mRNA stability ENSRNOG00000009745 0.08 1 0.04 4.0e-03 5.5 3.72e-08 0.05 FALSE
BLA Phyhip mRNA stability ENSRNOG00000010555 0.07 1 0.05 1.8e-03 5.5 3.72e-08 0.05 FALSE
Brain Ppp3cc alternative TSS ENSRNOT00000091826 0.06 1 0.04 1.4e-04 5.5 3.72e-08 0.42 FALSE
Brain Ppp3cc alternative TSS ENSRNOT00000100817 0.07 1 0.05 8.4e-06 -5.5 3.72e-08 0.68 FALSE
Brain Ppp3cc alternative TSS ENSRNOT00000082505 0.08 1 0.06 1.5e-06 5.5 3.72e-08 0.74 FALSE
Brain Ppp3cc alternative TSS ENSRNOT00000100817 0.08 1 0.06 2.0e-06 -5.5 3.72e-08 0.69 FALSE
Brain Rhobtb2 alternative TSS ENSRNOT00000117351 0.03 1 0.01 2.7e-02 5.21 1.91e-07 0.04 FALSE
Brain Rhobtb2 alternative TSS ENSRNOT00000023876 0.03 1 0.01 3.8e-02 -5.21 1.91e-07 0.03 FALSE
Brain Rhobtb2 alternative TSS ENSRNOT00000117351 0.03 1 0.01 2.9e-02 5.21 1.91e-07 0.04 FALSE
Brain Sorbs3 gene expression ENSRNOG00000008829 0.16 118 0.13 5.3e-12 -5.46 4.87e-08 0.58 FALSE
Brain Ppp3cc gene expression ENSRNOG00000009745 0.4 13 0.34 1.3e-32 5.46 4.71e-08 0.61 FALSE
Brain Slc39a14 gene expression ENSRNOG00000009832 0.05 1 0.04 1.1e-04 -5.34 9.43e-08 0.08 FALSE
Brain Polr3d gene expression ENSRNOG00000010028 0.17 588 0.13 2.1e-12 -5.29 1.20e-07 0.63 FALSE
Brain Bmp1 gene expression ENSRNOG00000010890 0.19 634 0.22 4.3e-20 5.27 1.38e-07 0.65 FALSE
Brain Lgi3 gene expression ENSRNOG00000011323 0.1 1 0.1 6.4e-10 -5.28 1.29e-07 0.64 FALSE
Brain Hr gene expression ENSRNOG00000011427 0.02 1 0.02 8.0e-03 -5.28 1.29e-07 0.04 FALSE
Brain Nudt18 gene expression ENSRNOG00000011831 0.13 79 0.06 2.5e-06 -5.28 1.27e-07 0.64 FALSE
Brain Dmtn gene expression ENSRNOG00000012273 0.15 172 0.18 1.9e-16 -5.44 5.44e-08 0.67 FALSE
Brain Entpd4 gene expression ENSRNOG00000016321 0.07 332 0.05 3.7e-05 -5.31 1.09e-07 0.75 FALSE
Brain Chmp7 gene expression ENSRNOG00000016939 0.04 1 0.03 1.9e-03 -5.32 1.03e-07 0.05 FALSE
Brain Rhobtb2 gene expression ENSRNOG00000017373 0.31 528 0.26 1.6e-24 5.29 1.22e-07 0.65 FALSE
Brain Egr3 gene expression ENSRNOG00000017828 0.04 13 0.03 1.8e-03 -5.37 7.86e-08 0.54 TRUE
Brain Ccar2 gene expression ENSRNOG00000018295 0.15 722 0.12 1.6e-11 5.3 1.19e-07 0.58 FALSE
Brain Tnfrsf10b gene expression ENSRNOG00000038483 0.26 479 0.22 8.9e-20 5.28 1.28e-07 0.68 FALSE
Brain Dmtn isoform ratio ENSRNOT00000106565 0.04 1 0.03 5.6e-04 5.38 7.48e-08 0.07 FALSE
Brain Egr3 isoform ratio ENSRNOT00000116948 0.03 15 0.02 2.7e-03 5.18 2.24e-07 0.48 FALSE
Brain Bin3 isoform ratio ENSRNOT00000024614 0.08 14 0.07 8.4e-07 5.32 1.03e-07 0.58 FALSE
Brain Bin3 isoform ratio ENSRNOT00000099631 0.08 1 0.07 5.8e-07 -5.32 1.03e-07 0.52 FALSE
Brain Ppp3cc intron excision ratio chr15:45297492:45298385 0.03 1 0.02 5.2e-03 -5.34 9.43e-08 0.04 FALSE
Brain Dmtn intron excision ratio chr15:45693188:45694000 0.04 1 0.04 4.8e-05 -5.21 1.92e-07 0.1 FALSE
Brain Dmtn intron excision ratio chr15:45693794:45694000 0.03 1 0.02 3.2e-03 5.5 3.72e-08 0.09 FALSE
Brain Dmtn intron excision ratio chr15:45694169:45704328 0.08 685 0.08 4.6e-08 -5.18 2.26e-07 0.66 FALSE
Brain Dmtn intron excision ratio chr15:45702261:45704328 0.06 1 0.08 8.7e-08 5.5 3.72e-08 0.85 FALSE
Brain Ppp3cc mRNA stability ENSRNOG00000009745 0.4 639 0.33 2.7e-31 5.29 1.22e-07 0.61 FALSE
Brain Slc39a14 mRNA stability ENSRNOG00000009832 0.07 612 0.06 5.3e-06 -5.28 1.28e-07 0.62 FALSE
Brain R3hcc1 mRNA stability ENSRNOG00000016777 0.08 436 0.06 3.0e-06 5.28 1.30e-07 0.7 FALSE
Brain Chmp7 mRNA stability ENSRNOG00000016939 0.05 1 0.04 7.7e-05 -5.21 1.91e-07 0.08 FALSE
Brain Bin3 mRNA stability ENSRNOG00000018023 0.05 1 0.04 1.2e-04 5.23 1.68e-07 0.06 FALSE
Brain Ccar2 mRNA stability ENSRNOG00000018295 0.04 722 0.03 1.4e-03 5.29 1.21e-07 0.53 FALSE
Eye Phyhip gene expression ENSRNOG00000010555 0.77 572 0.52 1.2e-09 -5.28 1.32e-07 0.63 FALSE
Eye Tnfrsf10b gene expression ENSRNOG00000038483 0.37 180 0.25 8.7e-05 5.31 1.12e-07 0.58 FALSE
IL Ppp3cc gene expression ENSRNOG00000009745 0.54 638 0.28 1.7e-07 5.29 1.23e-07 0.61 FALSE
IL Dmtn gene expression ENSRNOG00000012273 0.23 1 0.1 1.9e-03 -5.27 1.33e-07 0.07 FALSE
IL Rhobtb2 gene expression ENSRNOG00000017373 0.24 1 0.11 1.6e-03 5.26 1.47e-07 0.47 FALSE
IL ENSRNOG00000067974 gene expression ENSRNOG00000067974 0.2 330 0.06 1.2e-02 5.31 1.11e-07 0.44 FALSE
IL Ppp3cc mRNA stability ENSRNOG00000009745 0.33 1 0.13 6.3e-04 5.32 1.03e-07 0.07 FALSE
IL Bin3 mRNA stability ENSRNOG00000018023 0.16 713 0.05 2.9e-02 5.29 1.22e-07 0.29 FALSE
LHb Sorbs3 gene expression ENSRNOG00000008829 0.22 707 0.11 1.5e-03 -5.29 1.22e-07 0.45 FALSE
LHb Ppp3cc gene expression ENSRNOG00000009745 0.37 637 0.22 7.1e-06 5.29 1.22e-07 0.59 FALSE
LHb Phyhip gene expression ENSRNOG00000010555 0.52 3 0.31 3.9e-08 5.29 1.25e-07 0.64 TRUE
LHb Tnfrsf10b gene expression ENSRNOG00000038483 0.52 1 0.26 8.1e-07 5.27 1.37e-07 0.18 FALSE
LHb Ppp3cc mRNA stability ENSRNOG00000009745 0.28 637 0.12 8.4e-04 5.29 1.23e-07 0.51 FALSE
LHb Loxl2 mRNA stability ENSRNOG00000016758 0.16 1 0.08 7.0e-03 -5.26 1.47e-07 0.33 FALSE
Liver R3hcc1 alternative TSS ENSRNOT00000022706 0.11 1 0.09 7.3e-10 5.19 2.07e-07 0.58 FALSE
Liver R3hcc1 alternative TSS ENSRNOT00000101142 0.11 107 0.09 5.6e-10 -5.27 1.35e-07 0.7 FALSE
Liver Pdlim2 gene expression ENSRNOG00000008543 0.02 271 0.02 3.5e-03 -5.28 1.30e-07 0.45 FALSE
Liver Ppp3cc gene expression ENSRNOG00000009745 0.02 1 0.01 8.0e-03 -5.31 1.10e-07 0.03 FALSE
Liver Slc39a14 gene expression ENSRNOG00000009832 0.03 611 0.03 5.2e-04 5.29 1.22e-07 0.58 FALSE
Liver Polr3d gene expression ENSRNOG00000010028 0.08 97 0.06 5.6e-07 -5.31 1.09e-07 0.63 TRUE
Liver Bmp1 gene expression ENSRNOG00000010890 0.1 1 0.13 3.7e-14 5.28 1.30e-07 0.64 FALSE
Liver Fgf17 gene expression ENSRNOG00000012912 0.02 697 0.01 1.7e-02 -5.16 2.51e-07 0.47 FALSE
Liver R3hcc1 gene expression ENSRNOG00000016777 0.43 1 0.38 4.3e-44 -5.19 2.07e-07 0.58 FALSE
Liver Rhobtb2 gene expression ENSRNOG00000017373 0.04 1 0.03 1.8e-04 5.16 2.52e-07 0.06 FALSE
Liver Tnfrsf10b gene expression ENSRNOG00000038483 0.05 1 0.03 1.3e-04 -5.27 1.37e-07 0.16 FALSE
Liver ENSRNOG00000067366 gene expression ENSRNOG00000067366 0.03 1 0.02 2.0e-03 -5.26 1.42e-07 0.07 FALSE
Liver Sorbs3 intron excision ratio chr15:45263517:45263631 0.03 478 0.02 1.5e-03 -5.34 9.55e-08 0.54 FALSE
Liver Sorbs3 intron excision ratio chr15:45263517:45264017 0.03 478 0.03 6.6e-04 5.33 9.58e-08 0.56 FALSE
Liver Slc39a14 mRNA stability ENSRNOG00000009832 0.02 611 0.02 4.0e-03 -5.28 1.26e-07 0.45 FALSE
Liver R3hcc1 mRNA stability ENSRNOG00000016777 0.11 107 0.09 2.8e-10 -5.27 1.35e-07 0.71 FALSE
Liver Bin3 mRNA stability ENSRNOG00000018023 0.17 61 0.16 6.5e-17 5.23 1.66e-07 0.59 FALSE
NAcc Ppp3cc gene expression ENSRNOG00000009745 0.37 18 0.26 3.8e-19 5.31 1.10e-07 0.61 FALSE
NAcc Nudt18 gene expression ENSRNOG00000011831 0.16 7 0.06 2.1e-05 -5.23 1.65e-07 0.65 FALSE
NAcc R3hcc1 gene expression ENSRNOG00000016777 0.07 436 0.05 1.7e-04 5.28 1.28e-07 0.67 FALSE
NAcc Rhobtb2 gene expression ENSRNOG00000017373 0.11 430 0.07 5.7e-06 5.45 5.07e-08 0.66 FALSE
NAcc Ccar2 gene expression ENSRNOG00000018295 0.08 722 0.05 8.1e-05 5.29 1.20e-07 0.57 FALSE
NAcc Tnfrsf10b gene expression ENSRNOG00000038483 0.12 1 0.07 3.2e-06 5.28 1.30e-07 0.57 FALSE
NAcc Egr3 isoform ratio ENSRNOT00000116948 0.06 709 0.03 4.1e-03 5.29 1.21e-07 0.51 FALSE
NAcc Fhip2b intron excision ratio chr15:45658567:45658743 0.04 650 0 1.9e-01 -5.12 3.06e-07 0.4 FALSE
NAcc ENSRNOG00000067974 intron excision ratio chr15:44603231:44603574 0.04 330 0.01 4.4e-02 -5.31 1.11e-07 0.43 FALSE
NAcc Ppp3cc mRNA stability ENSRNOG00000009745 0.06 639 0.03 1.9e-03 5.29 1.23e-07 0.58 FALSE
NAcc R3hcc1 mRNA stability ENSRNOG00000016777 0.04 61 0.03 1.6e-03 5.26 1.42e-07 0.43 FALSE
NAcc Bin3 mRNA stability ENSRNOG00000018023 0.04 1 0.04 4.6e-04 5.5 3.72e-08 0.07 FALSE
OFC Ppp3cc gene expression ENSRNOG00000009745 0.45 1 0.15 1.8e-04 5.32 1.05e-07 0.13 FALSE
OFC Polr3d gene expression ENSRNOG00000010028 0.26 1 0.12 9.0e-04 -5.27 1.33e-07 0.06 FALSE
OFC Nudt18 gene expression ENSRNOG00000011831 0.27 1 0.07 1.1e-02 -5.32 1.03e-07 0.06 FALSE
OFC Dmtn gene expression ENSRNOG00000012273 0.14 1 0.07 7.8e-03 -5.32 1.03e-07 0.06 FALSE
OFC Dok2 gene expression ENSRNOG00000013922 0.15 1 0.08 7.1e-03 5.32 1.03e-07 0.06 FALSE
OFC Rhobtb2 gene expression ENSRNOG00000017373 0.25 1 0.12 7.9e-04 5.32 1.05e-07 0.06 FALSE
OFC Ccar2 gene expression ENSRNOG00000018295 0.26 721 0.13 5.1e-04 5.29 1.22e-07 0.47 FALSE
OFC Tnfrsf10b gene expression ENSRNOG00000038483 0.23 1 0.08 7.0e-03 5.28 1.30e-07 0.06 FALSE
OFC Dmtn intron excision ratio chr15:45679395:45679904 0.11 1 0.13 6.2e-04 5.24 1.64e-07 0.06 FALSE
OFC Ppp3cc mRNA stability ENSRNOG00000009745 0.17 638 0.09 3.2e-03 5.29 1.22e-07 0.42 FALSE
OFC Bin3 mRNA stability ENSRNOG00000018023 0.27 4 0.14 3.2e-04 5.13 2.95e-07 0.52 FALSE
PL Sorbs3 alternative TSS ENSRNOT00000012056 0.04 711 0.02 1.9e-02 -5.29 1.23e-07 0.37 FALSE
PL Sorbs3 alternative TSS ENSRNOT00000113720 0.04 711 0.02 1.4e-02 5.29 1.23e-07 0.42 FALSE
PL Ppp3cc alternative TSS ENSRNOT00000100817 0.07 1 0.04 6.1e-04 -5.32 1.03e-07 0.06 FALSE
PL Ppp3cc alternative TSS ENSRNOT00000100817 0.09 1 0.07 6.7e-06 -5.32 1.03e-07 0.23 FALSE
PL Dok2 alternative TSS ENSRNOT00000103496 0.04 756 0.02 1.6e-02 -5.14 2.81e-07 0.49 FALSE
PL Dok2 alternative TSS ENSRNOT00000119823 0.04 756 0.01 2.2e-02 5.13 2.95e-07 0.46 FALSE
PL Gfra2 alternative TSS ENSRNOT00000096485 0.04 1 0.02 5.5e-03 -5.36 8.34e-08 0.05 FALSE
PL Gfra2 alternative TSS ENSRNOT00000019222 0.04 1 0.03 3.4e-03 5.36 8.34e-08 0.05 FALSE
PL Gfra2 alternative TSS ENSRNOT00000096485 0.04 1 0.02 6.3e-03 -5.36 8.34e-08 0.05 FALSE
PL Ppp3cc gene expression ENSRNOG00000009745 0.55 408 0.41 1.1e-33 5.36 8.47e-08 0.61 FALSE
PL Slc39a14 gene expression ENSRNOG00000009832 0.11 1 0.08 1.5e-06 -5.29 1.21e-07 0.43 FALSE
PL Polr3d gene expression ENSRNOG00000010028 0.06 588 0.04 4.6e-04 -5.28 1.27e-07 0.58 FALSE
PL Lgi3 gene expression ENSRNOG00000011323 0.05 645 0.04 4.1e-04 -5.28 1.33e-07 0.63 FALSE
PL Dmtn gene expression ENSRNOG00000012273 0.13 25 0.13 6.1e-10 -5.21 1.91e-07 0.66 FALSE
PL Entpd4 gene expression ENSRNOG00000016321 0.06 118 0.03 2.0e-03 -5.25 1.49e-07 0.71 FALSE
PL R3hcc1 gene expression ENSRNOG00000016777 0.14 436 0.09 1.8e-07 5.28 1.28e-07 0.7 FALSE
PL Rhobtb2 gene expression ENSRNOG00000017373 0.34 1 0.26 1.4e-19 5.23 1.66e-07 0.58 FALSE
PL Ccar2 gene expression ENSRNOG00000018295 0.1 1 0.07 3.4e-06 5.3 1.16e-07 0.38 FALSE
PL Tnfrsf10b gene expression ENSRNOG00000038483 0.09 1 0.07 9.3e-06 5.23 1.66e-07 0.18 FALSE
PL Ppp3cc intron excision ratio chr15:45297492:45309209 0.05 1 0.03 2.0e-03 5.32 1.03e-07 0.04 FALSE
PL Slc39a14 intron excision ratio chr15:45403531:45423398 0.04 1 0.02 8.5e-03 -5.5 3.72e-08 0.04 FALSE
PL Phyhip intron excision ratio chr15:45535048:45538056 0.04 1 0.01 4.2e-02 -5.32 1.03e-07 0.04 FALSE
PL Dmtn intron excision ratio chr15:45702261:45704328 0.04 685 0.03 2.2e-03 5.2 1.96e-07 0.59 FALSE
PL Ppp3cc mRNA stability ENSRNOG00000009745 0.21 639 0.14 4.3e-11 5.29 1.22e-07 0.61 FALSE
PL Slc39a14 mRNA stability ENSRNOG00000009832 0.04 1 0.03 2.3e-03 -5.5 3.72e-08 0.05 FALSE
PL Bin3 mRNA stability ENSRNOG00000018023 0.05 131 0.03 2.7e-03 5.32 1.02e-07 0.51 FALSE