chr15:35,841,493-43,041,493

Trait: Tibialis anterior weight

Best TWAS P=7.31e-09 · Best GWAS P=5.35e-09 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Bnip3l alternative TSS ENSRNOT00000095519 0.06 1461 0.05 4.1e-06 5.2 2.01e-07 0.62 FALSE
Adipose Bnip3l alternative TSS ENSRNOT00000014798 0.03 1461 0.02 1.3e-03 -5.15 2.63e-07 0.54 FALSE
Adipose Ppp2r2a alternative TSS ENSRNOT00000099993 0.03 1 0.03 1.8e-04 -5.37 7.67e-08 0.07 FALSE
Adipose Ppp2r2a alternative TSS ENSRNOT00000099993 0.04 1 0.03 9.6e-05 -5.37 7.67e-08 0.12 FALSE
Adipose Trim35 gene expression ENSRNOG00000009449 0.14 1 0.07 9.5e-09 -5.36 8.16e-08 0.7 FALSE
Adipose Fam124a gene expression ENSRNOG00000009802 0.03 1 0.03 3.1e-04 5.78 7.31e-09 0.28 TRUE
Adipose Ppp2r2a gene expression ENSRNOG00000011158 0.07 1 0.06 3.1e-07 -5.37 7.67e-08 0.66 FALSE
Adipose Sox7 gene expression ENSRNOG00000012049 0.11 1398 0.09 5.9e-10 5.53 3.18e-08 0.78 FALSE
Adipose Kif13b gene expression ENSRNOG00000013089 0.08 1 0.09 9.2e-10 -5.32 1.02e-07 0.61 FALSE
Adipose Ints9 gene expression ENSRNOG00000013459 0.09 1 0.08 5.4e-09 -5.32 1.03e-07 0.64 FALSE
Adipose Nefm gene expression ENSRNOG00000013916 0.3 1 0.25 2.3e-27 5.29 1.22e-07 0.64 FALSE
Adipose Gulo gene expression ENSRNOG00000016648 0.24 1905 0.23 9.3e-26 5.26 1.43e-07 0.57 FALSE
Adipose Dock5 gene expression ENSRNOG00000024703 0.11 1 0.09 3.4e-10 -5.15 2.67e-07 0.46 FALSE
Adipose Ptk2b gene expression ENSRNOG00000027839 0.14 1 0.08 3.3e-09 -5.47 4.45e-08 0.81 FALSE
Adipose Fzd3 gene expression ENSRNOG00000047211 0.03 18 0.02 3.0e-03 -5.48 4.36e-08 0.65 FALSE
Adipose Bnip3l isoform ratio ENSRNOT00000095519 0.04 1 0.04 3.3e-05 5.38 7.37e-08 0.22 FALSE
Adipose Ppp2r2a isoform ratio ENSRNOT00000099993 0.05 1 0.04 1.5e-05 -5.37 7.67e-08 0.29 FALSE
Adipose Rnaseh2b mRNA stability ENSRNOG00000009192 0.02 1 0.02 1.2e-03 -5.78 7.31e-09 0.1 FALSE
Adipose Dpysl2 mRNA stability ENSRNOG00000009625 0.04 1614 0.02 2.0e-03 5.16 2.50e-07 0.56 TRUE
Adipose Ints6 mRNA stability ENSRNOG00000009873 0.02 1830 0.01 9.8e-03 -5.41 6.17e-08 0.32 TRUE
Adipose Dock5 mRNA stability ENSRNOG00000024703 0.13 1 0.11 3.8e-12 -5.33 9.68e-08 0.69 FALSE
Adipose Ptk2b mRNA stability ENSRNOG00000027839 0.03 1 0.02 3.0e-03 -5.36 8.16e-08 0.04 FALSE
BLA Msra alternative TSS ENSRNOT00000102126 0.12 1225 0.08 2.8e-05 5.24 1.64e-07 0.57 FALSE
BLA Gucy1b2 gene expression ENSRNOG00000009440 0.27 1 0.3 1.6e-16 -5.46 4.79e-08 0.46 FALSE
BLA Wdfy2 gene expression ENSRNOG00000010042 0.16 47 0.09 1.1e-05 5.28 1.29e-07 0.17 TRUE
BLA Pinx1 gene expression ENSRNOG00000012012 0.07 13 0.05 1.7e-03 5.62 1.87e-08 0.71 FALSE
BLA Kctd9 gene expression ENSRNOG00000012951 0.09 1 0.06 3.0e-04 5.29 1.22e-07 0.08 FALSE
BLA Nefm gene expression ENSRNOG00000013916 0.14 32 0.07 1.3e-04 5.29 1.20e-07 0.65 FALSE
BLA Prss55 gene expression ENSRNOG00000047258 0.37 28 0.32 1.9e-17 -5.52 3.43e-08 0.77 FALSE
BLA ENSRNOG00000047632 gene expression ENSRNOG00000047632 0.13 1 0.06 4.9e-04 -5.35 8.94e-08 0.38 FALSE
BLA Stmn4 gene expression ENSRNOG00000053334 0.08 1 0.06 5.9e-04 5.29 1.22e-07 0.06 FALSE
BLA ENSRNOG00000070558 gene expression ENSRNOG00000070558 0.12 6 0.11 2.7e-06 -5.18 2.26e-07 0.57 TRUE
BLA Msra isoform ratio ENSRNOT00000102126 0.16 1 0.14 7.2e-08 5.35 8.94e-08 0.62 FALSE
BLA Rnaseh2b intron excision ratio chr15:36576723:36583517 0.07 2320 0.06 6.4e-04 5.13 2.82e-07 0.31 FALSE
BLA Ptk2b intron excision ratio chr15:40414856:40481059 0.27 2104 0.15 1.6e-08 -5.48 4.17e-08 0.74 FALSE
BLA Prss55 intron excision ratio chr15:38340170:38344928 0.06 1 0.04 2.6e-03 -5.61 2.02e-08 0.1 FALSE
BLA Stmn4 intron excision ratio chr15:40541457:40551926 0.11 1 0.05 1.3e-03 -5.32 1.03e-07 0.06 FALSE
BLA Stmn4 intron excision ratio chr15:40554019:40554341 0.08 9 0.04 3.4e-03 -5.45 4.96e-08 0.45 TRUE
BLA Fam124a mRNA stability ENSRNOG00000009802 0.05 1 0.06 5.3e-04 -5.51 3.53e-08 0.05 FALSE
BLA Prss55 mRNA stability ENSRNOG00000047258 0.06 1472 0.01 9.0e-02 -5.22 1.81e-07 0.45 FALSE
Brain Bnip3l alternative polyA ENSRNOT00000095519 0.08 1462 0.06 2.7e-06 5.34 9.27e-08 0.65 FALSE
Brain Bnip3l alternative polyA ENSRNOT00000102793 0.08 1462 0.06 2.0e-06 -5.36 8.47e-08 0.65 FALSE
Brain Msra alternative polyA ENSRNOT00000016616 0.14 1225 0.1 1.1e-09 -5.52 3.32e-08 0.64 FALSE
Brain Msra alternative polyA ENSRNOT00000101265 0.15 1225 0.1 1.2e-09 5.53 3.20e-08 0.64 FALSE
Brain Msra alternative TSS ENSRNOT00000095387 0.03 1225 0.02 2.7e-03 -5.31 1.11e-07 0.53 FALSE
Brain Gucy1b2 gene expression ENSRNOG00000009440 0.23 15 0.26 4.0e-24 -5.46 4.85e-08 0.47 FALSE
Brain Pinx1 gene expression ENSRNOG00000012012 0.09 15 0.05 3.4e-05 5.3 1.19e-07 0.75 FALSE
Brain Kctd9 gene expression ENSRNOG00000012951 0.1 1 0.1 1.3e-09 5.33 9.68e-08 0.77 FALSE
Brain Kif13b gene expression ENSRNOG00000013089 0.13 117 0.12 7.1e-11 -5.31 1.12e-07 0.62 TRUE
Brain Hmbox1 gene expression ENSRNOG00000013326 0.07 1 0.06 2.4e-06 5.21 1.91e-07 0.47 FALSE
Brain Nefm gene expression ENSRNOG00000013916 0.23 22 0.16 1.0e-14 5.29 1.22e-07 0.66 FALSE
Brain Scara3 gene expression ENSRNOG00000016177 0.44 1842 0.26 5.0e-24 -5.13 2.91e-07 0.5 FALSE
Brain Dock5 gene expression ENSRNOG00000024703 0.25 470 0.23 7.4e-21 -5.35 8.63e-08 0.68 FALSE
Brain ENSRNOG00000047632 gene expression ENSRNOG00000047632 0.15 1 0.18 7.5e-17 -5.35 8.94e-08 0.69 FALSE
Brain Stmn4 gene expression ENSRNOG00000053334 0.18 2132 0.2 1.2e-18 5.28 1.28e-07 0.44 FALSE
Brain ENSRNOG00000070558 gene expression ENSRNOG00000070558 0.09 6 0.08 3.8e-08 -5.52 3.30e-08 0.15 FALSE
Brain Msra isoform ratio ENSRNOT00000016616 0.18 1225 0.1 1.3e-09 -5.57 2.61e-08 0.63 FALSE
Brain Msra intron excision ratio chr15:38364214:38449622 0.13 1 0.15 1.3e-13 5.45 5.04e-08 0.76 FALSE
Brain Ptk2b intron excision ratio chr15:40414856:40481059 0.16 1 0.16 1.9e-14 -5.18 2.24e-07 0.48 FALSE
Brain Prss55 intron excision ratio chr15:38340170:38344928 0.07 1472 0.06 3.2e-06 -5.22 1.80e-07 0.74 TRUE
Brain Stmn4 intron excision ratio chr15:40553358:40553939 0.24 1 0.11 3.5e-10 -5.19 2.15e-07 0.44 FALSE
Brain Stmn4 intron excision ratio chr15:40553358:40554341 0.32 1 0.17 3.7e-15 5.19 2.15e-07 0.44 FALSE
Brain Stmn4 intron excision ratio chr15:40554019:40554341 0.11 2132 0.1 8.8e-10 -5.27 1.35e-07 0.56 FALSE
Brain Stmn4 intron excision ratio chr15:40555719:40556362 0.03 2132 0.01 5.5e-02 -5.13 2.94e-07 0.42 FALSE
Brain ENSRNOG00000009522 mRNA stability ENSRNOG00000009522 0.09 2027 0.07 4.8e-07 -5.44 5.23e-08 0.64 FALSE
Brain Kif13b mRNA stability ENSRNOG00000013089 0.03 1259 0.02 6.8e-03 -5.18 2.27e-07 0.43 FALSE
Brain Dock5 mRNA stability ENSRNOG00000024703 0.05 1 0.04 1.6e-04 -5.34 9.13e-08 0.14 FALSE
IL Gucy1b2 gene expression ENSRNOG00000009440 0.22 1 0.05 2.3e-02 -5.34 9.23e-08 0.05 FALSE
IL Nefm gene expression ENSRNOG00000013916 0.26 485 0.12 9.9e-04 5.34 9.17e-08 0.55 FALSE
IL Stmn4 intron excision ratio chr15:40553358:40553939 0.4 2128 0.17 5.6e-05 -5.3 1.13e-07 0.52 FALSE
IL Stmn4 intron excision ratio chr15:40553358:40554341 0.21 2128 0.04 4.6e-02 5.18 2.19e-07 0.32 FALSE
IL Nefl mRNA stability ENSRNOG00000013658 0.16 479 0.06 1.5e-02 5.35 9.04e-08 0.32 FALSE
LHb Bnip3l gene expression ENSRNOG00000009820 0.29 1454 0.13 5.2e-04 -5.17 2.34e-07 0.49 FALSE
LHb Kctd9 gene expression ENSRNOG00000012951 0.21 322 0.06 1.9e-02 5.32 1.04e-07 0.38 FALSE
LHb Nefm gene expression ENSRNOG00000013916 0.17 1 0.05 2.5e-02 5.29 1.25e-07 0.06 FALSE
LHb Dock5 gene expression ENSRNOG00000024703 0.38 468 0.21 1.3e-05 -5.35 8.78e-08 0.67 FALSE
LHb ENSRNOG00000070558 gene expression ENSRNOG00000070558 0.16 1 0.07 9.0e-03 -5.46 4.65e-08 0.05 FALSE
Liver Gucy1b2 alternative TSS ENSRNOT00000012948 0.02 2125 0.02 5.7e-03 -5.38 7.27e-08 0.39 FALSE
Liver Gucy1b2 alternative TSS ENSRNOT00000081912 0.02 2125 0.02 5.7e-03 5.39 6.87e-08 0.4 FALSE
Liver Ints9 alternative TSS ENSRNOT00000096924 0.02 1 0.02 5.2e-03 -5.34 9.17e-08 0.04 FALSE
Liver Ints9 alternative TSS ENSRNOT00000096924 0.02 1 0.02 5.4e-03 -5.38 7.63e-08 0.04 FALSE
Liver Wdfy2 gene expression ENSRNOG00000010042 0.38 217 0.38 6.5e-44 -5.22 1.82e-07 0.14 TRUE
Liver Extl3 gene expression ENSRNOG00000013581 0.05 1 0.06 6.2e-07 -5.24 1.58e-07 0.54 FALSE
Liver Gulo gene expression ENSRNOG00000016648 0.19 1905 0.19 8.9e-21 5.14 2.69e-07 0.47 FALSE
Liver Chrna2 gene expression ENSRNOG00000017424 0.06 2032 0.06 8.2e-07 -5.17 2.34e-07 0.55 FALSE
Liver Dock5 gene expression ENSRNOG00000024703 0.12 1 0.1 6.9e-11 -5.15 2.67e-07 0.46 FALSE
Liver ENSRNOG00000047632 gene expression ENSRNOG00000047632 0.04 1478 0.03 4.5e-04 -5.32 1.06e-07 0.69 FALSE
Liver Rnaseh2b intron excision ratio chr15:36576723:36581882 0.06 2319 0.06 6.7e-07 -5.23 1.66e-07 0.51 FALSE
Liver Gucy1b2 intron excision ratio chr15:36640915:36643646 0.08 2125 0.09 2.3e-10 -5.48 4.17e-08 0.52 FALSE
Liver Gucy1b2 mRNA stability ENSRNOG00000009440 0.07 2125 0.08 8.6e-09 -5.18 2.20e-07 0.4 FALSE
NAcc Gucy1b2 alternative polyA ENSRNOT00000012948 0.06 55 0.08 7.8e-07 5.27 1.33e-07 0.51 TRUE
NAcc Msra alternative polyA ENSRNOT00000016616 0.05 1 0.05 1.9e-04 -5.37 7.76e-08 0.08 FALSE
NAcc Msra alternative polyA ENSRNOT00000101265 0.05 1 0.05 2.2e-04 5.37 7.76e-08 0.08 FALSE
NAcc Ints9 alternative TSS ENSRNOT00000096924 0.03 1362 0.02 1.2e-02 -5.31 1.09e-07 0.44 FALSE
NAcc Gucy1b2 gene expression ENSRNOG00000009440 0.23 1 0.22 1.6e-16 -5.64 1.65e-08 0.7 FALSE
NAcc Ints6 gene expression ENSRNOG00000009873 0.06 1 0.05 1.6e-04 -5.35 8.68e-08 0.06 FALSE
NAcc Kctd9 gene expression ENSRNOG00000012951 0.08 1 0.04 2.9e-04 5.29 1.22e-07 0.28 FALSE
NAcc Extl3 gene expression ENSRNOG00000013581 0.06 1351 0.06 2.4e-05 5.1 3.41e-07 0.5 FALSE
NAcc Nefm gene expression ENSRNOG00000013916 0.07 485 0.04 2.8e-04 5.35 8.95e-08 0.66 FALSE
NAcc Prss55 gene expression ENSRNOG00000047258 0.35 1472 0.14 1.1e-10 -5.37 8.04e-08 0.74 FALSE
NAcc ENSRNOG00000070558 gene expression ENSRNOG00000070558 0.04 1 0.04 6.1e-04 -5.46 4.77e-08 0.06 FALSE
NAcc Msra isoform ratio ENSRNOT00000016616 0.05 1 0.04 4.9e-04 -5.37 7.76e-08 0.07 FALSE
NAcc Msra isoform ratio ENSRNOT00000102126 0.07 16 0.06 1.6e-05 5.28 1.26e-07 0.64 FALSE
NAcc Ppp2r2a intron excision ratio chr15:41261896:41263615 0.06 1 0.03 5.6e-03 5.38 7.37e-08 0.05 FALSE
NAcc Kif13b intron excision ratio chr15:39045792:39048068 0.04 1259 0.02 6.8e-03 5.35 8.94e-08 0.5 FALSE
NAcc Ptk2b intron excision ratio chr15:40414856:40481059 0.26 95 0.13 3.9e-10 -5.22 1.78e-07 0.46 FALSE
NAcc Stmn4 intron excision ratio chr15:40553358:40553939 0.15 1 0.08 1.4e-06 -5.24 1.57e-07 0.44 TRUE
NAcc Stmn4 intron excision ratio chr15:40553358:40554341 0.21 1 0.1 4.1e-08 5.18 2.17e-07 0.44 FALSE
NAcc ENSRNOG00000009522 mRNA stability ENSRNOG00000009522 0.07 2025 0.04 2.6e-04 -5.29 1.26e-07 0.62 FALSE
NAcc Msra mRNA stability ENSRNOG00000012440 0.22 1 0.16 5.0e-12 5.46 4.80e-08 0.77 FALSE
OFC Nefm gene expression ENSRNOG00000013916 0.96 11 0.25 1.4e-06 5.31 1.09e-07 0.37 TRUE
OFC Scara3 gene expression ENSRNOG00000016177 0.43 2 0.24 2.0e-06 -5.09 3.55e-07 0.58 FALSE
OFC Stmn4 intron excision ratio chr15:40554019:40554341 0.23 2128 0.09 4.0e-03 -5.36 8.49e-08 0.31 FALSE
OFC ENSRNOG00000009522 mRNA stability ENSRNOG00000009522 0.19 2019 0.09 3.1e-03 -5.44 5.26e-08 0.4 FALSE
PL Msra alternative polyA ENSRNOT00000016616 0.06 1 0.05 1.2e-04 -5.32 1.01e-07 0.1 FALSE
PL Msra alternative polyA ENSRNOT00000101265 0.06 1 0.05 8.6e-05 5.32 1.01e-07 0.11 FALSE
PL Gucy1b2 gene expression ENSRNOG00000009440 0.5 1 0.36 2.9e-28 -5.41 6.41e-08 0.39 FALSE
PL Fam124a gene expression ENSRNOG00000009802 0.03 1 0.02 1.6e-02 5.45 5.17e-08 0.04 FALSE
PL Ints6 gene expression ENSRNOG00000009873 0.05 1 0.02 1.9e-02 -5.52 3.47e-08 0.05 FALSE
PL Wdfy2 gene expression ENSRNOG00000010042 0.03 1 0.02 2.0e-02 5.62 1.94e-08 0.04 FALSE
PL Kctd9 gene expression ENSRNOG00000012951 0.09 1 0.07 2.3e-06 5.36 8.45e-08 0.62 FALSE
PL Nefl gene expression ENSRNOG00000013658 0.05 479 0.03 2.4e-03 -5.35 8.83e-08 0.58 FALSE
PL Fbxo16 gene expression ENSRNOG00000014003 0.28 20 0.23 1.2e-17 -5.18 2.21e-07 0.71 FALSE
PL Dock5 gene expression ENSRNOG00000024703 0.04 470 0.02 1.2e-02 -5.35 8.74e-08 0.47 FALSE
PL Prss55 gene expression ENSRNOG00000047258 0.19 1 0.16 3.6e-12 -5.37 7.76e-08 0.72 FALSE
PL ENSRNOG00000047632 gene expression ENSRNOG00000047632 0.09 20 0.06 3.0e-05 -5.19 2.14e-07 0.64 FALSE
PL Stmn4 gene expression ENSRNOG00000053334 0.07 1 0.04 4.9e-04 5.26 1.46e-07 0.13 FALSE
PL Msra isoform ratio ENSRNOT00000016616 0.08 1 0.06 2.0e-05 -5.32 1.01e-07 0.31 FALSE
PL Msra isoform ratio ENSRNOT00000102126 0.06 1 0.04 3.2e-04 5.27 1.37e-07 0.06 FALSE
PL Ints9 intron excision ratio chr15:39234621:39237155 0.05 1 0.03 2.1e-03 -5.27 1.37e-07 0.04 FALSE
PL Ints9 intron excision ratio chr15:39237294:39239666 0.06 1 0.03 3.0e-03 5.27 1.37e-07 0.04 FALSE
PL Ptk2b intron excision ratio chr15:40414856:40481059 0.43 1 0.23 2.3e-17 -5.24 1.57e-07 0.56 FALSE
PL ENSRNOG00000009522 mRNA stability ENSRNOG00000009522 0.06 1 0.05 1.8e-04 -5.25 1.55e-07 0.08 FALSE