Best TWAS P=1.10e-09 · Best GWAS P=1.67e-10 conditioned to 9.28e-03
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Rap1gds1 | gene expression | ENSRNOG00000015987 | 0.28 | 236 | 0.26 | 1.5e-28 | 5.24 | 1.64e-07 | 0.34 | FALSE |
Adipose | Dnajb14 | gene expression | ENSRNOG00000060107 | 0.25 | 76 | 0.23 | 2.7e-25 | -5.41 | 6.42e-08 | 0.36 | FALSE |
Adipose | Rap1gds1 | mRNA stability | ENSRNOG00000015987 | 0.13 | 2505 | 0.1 | 1.3e-11 | 5.73 | 1.03e-08 | 0.4 | FALSE |
BLA | Metap1 | gene expression | ENSRNOG00000012947 | 0.08 | 1 | 0.03 | 9.1e-03 | -5.57 | 2.57e-08 | 0.07 | FALSE |
BLA | Eif4e | gene expression | ENSRNOG00000052343 | 0.11 | 6 | 0.04 | 2.9e-03 | 5.4 | 6.66e-08 | 0.73 | FALSE |
Brain | Trmt10a | gene expression | ENSRNOG00000011025 | 0.46 | 300 | 0.36 | 1.9e-34 | 5.17 | 2.30e-07 | 0.04 | FALSE |
Brain | Rap1gds1 | gene expression | ENSRNOG00000015987 | 0.43 | 237 | 0.52 | 7.2e-56 | 5.56 | 2.71e-08 | 0.86 | FALSE |
Brain | Trmt10a | mRNA stability | ENSRNOG00000011025 | 0.08 | 27 | 0.04 | 7.2e-05 | -5.88 | 4.17e-09 | 0.48 | FALSE |
Eye | Rap1gds1 | gene expression | ENSRNOG00000015987 | 0.43 | 1 | 0.23 | 2.2e-04 | 5.85 | 5.06e-09 | 0.06 | FALSE |
LHb | Tspan5 | gene expression | ENSRNOG00000015913 | 0.26 | 51 | 0.17 | 9.9e-05 | 5.56 | 2.68e-08 | 0.53 | FALSE |
LHb | Stpg2 | gene expression | ENSRNOG00000023457 | 0.2 | 2587 | 0.11 | 1.6e-03 | 5.85 | 4.83e-09 | 0.49 | FALSE |
Liver | Mttp | gene expression | ENSRNOG00000010655 | 0.31 | 42 | 0.25 | 5.8e-28 | 5.26 | 1.46e-07 | 0.36 | FALSE |
Liver | Rap1gds1 | gene expression | ENSRNOG00000015987 | 0.25 | 1 | 0.23 | 3.8e-25 | 5.68 | 1.34e-08 | 0.41 | FALSE |
Liver | Adh7 | gene expression | ENSRNOG00000032959 | 0.55 | 9 | 0.39 | 1.8e-45 | -5.31 | 1.11e-07 | 0.56 | FALSE |
NAcc | Rap1gds1 | gene expression | ENSRNOG00000015987 | 0.07 | 1 | 0.08 | 1.3e-06 | 6.09 | 1.12e-09 | 0.87 | FALSE |
OFC | Tspan5 | isoform ratio | ENSRNOT00000021381 | 0.23 | 2 | 0.21 | 1.1e-05 | -5.65 | 1.57e-08 | 0.56 | FALSE |
PL | Rap1gds1 | gene expression | ENSRNOG00000015987 | 0.41 | 1 | 0.26 | 7.6e-20 | 5.69 | 1.31e-08 | 0.41 | FALSE |
PL | Stpg2 | gene expression | ENSRNOG00000023457 | 0.08 | 13 | 0.06 | 1.5e-05 | 6.09 | 1.10e-09 | 0.66 | TRUE |