Hub : Traits : Length with tail : ← →

chr9:58,279,121-60,963,686

Trait: Length with tail

Best TWAS P=1.104088e-08 · Best GWAS P=5.75313e-09 conditioned to 1

Associated models

#	Tissue	Gene	Modality	RNA phenotype	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	Adipose	Casp8	gene expression	ENSRNOG00000012331	0.09	0.01	enet	11	0.02	1.5e-03	-4.7	-5.5	4.2e-08	0.82	0.19	0.69	FALSE
2	Adipose	Kctd18	gene expression	ENSRNOG00000027091	0.08	0.03	enet	488	0.04	1.9e-05	-4.8	5.7	1.1e-08	-0.33	0.85	0.14	TRUE
3	Adipose	Aox2	gene expression	ENSRNOG00000033923	0.05	0.01	blup	2414	0.03	8.6e-04	-3.8	-5.3	1.0e-07	0.86	0.64	0.34	FALSE
4	BLA	Kctd18	intron excision ratio	chr9:59515068:59515815	0.08	0.06	top1	1	0.06	3.9e-04	-5.4	5.4	6.3e-08	-0.96	0.11	0.09	FALSE
5	BLA	Kctd18	intron excision ratio	chr9:59515068:59516751	0.11	0.08	lasso	10	0.08	3.9e-05	-5.1	-5.5	4.3e-08	0.80	0.54	0.45	FALSE
6	BLA	Aox1	mRNA stability	ENSRNOG00000015354	0.10	0.06	enet	12	0.07	1.7e-04	-5.2	-5.4	6.9e-08	0.78	0.72	0.25	FALSE
7	Brain	Nif3l1	gene expression	ENSRNOG00000013446	0.05	0.03	top1	1	0.03	7.9e-04	-5.6	5.6	2.1e-08	-0.94	0.06	0.43	TRUE
8	LHb	Kctd18	intron excision ratio	chr9:59510430:59512513	0.14	0.06	lasso	3	0.11	1.8e-03	-4.6	-5.2	2.2e-07	0.79	0.38	0.31	FALSE
9	Liver	Kctd18	gene expression	ENSRNOG00000027091	0.04	0.01	enet	157	0.02	1.0e-03	-4.8	5.5	4.2e-08	-0.91	0.48	0.45	FALSE
10	NAcc	Maip1	gene expression	ENSRNOG00000015983	0.06	0.04	lasso	35	0.05	1.7e-04	-3.8	5.1	3.2e-07	-0.88	0.31	0.67	TRUE
11	NAcc	Kctd18	intron excision ratio	chr9:59515068:59515815	0.10	0.08	lasso	16	0.08	1.0e-06	-5.3	5.4	7.1e-08	-0.91	0.66	0.34	FALSE
12	OFC	Aox4	gene expression	ENSRNOG00000014555	0.39	0.21	blup	2460	0.25	1.5e-06	-4.8	5.4	8.0e-08	-0.81	0.63	0.36	TRUE
13	PL	Kctd18	intron excision ratio	chr9:59515068:59516751	0.06	0.02	blup	2551	0.04	6.7e-04	-4.7	-5.5	3.9e-08	0.89	0.51	0.46	FALSE

h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.