Hub : Traits : Length with tail : ← →

chr9:67,025,649-69,247,638

Trait: Length with tail

Best TWAS P=4.876508e-12 · Best GWAS P=4.978672e-13 conditioned to 0

Associated models

#	Tissue	Gene	Modality	RNA phenotype	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	Adipose	Unc80	gene expression	ENSRNOG00000028362	0.18	0.12	enet	162	0.13	9.5e-15	-4.39	-5.5	4.9e-08	0.61	1.00	0.00	TRUE
2	Adipose	NA	gene expression	ENSRNOG00000063935	0.08	0.02	top1	1	0.02	1.5e-03	-6.60	6.6	4.1e-11	-0.48	0.11	0.05	TRUE
3	BLA	Lancl1	gene expression	ENSRNOG00000013557	0.39	0.35	top1	1	0.35	2.2e-19	-5.48	5.5	4.2e-08	-0.28	1.00	0.00	FALSE
4	Brain	Lancl1	gene expression	ENSRNOG00000013557	0.27	0.55	enet	443	0.56	4.0e-62	-5.55	5.5	4.9e-08	-0.39	1.00	0.00	FALSE
5	Brain	NA	gene expression	ENSRNOG00000068276	0.08	0.06	blup	2374	0.07	8.3e-07	-5.64	5.7	9.4e-09	-0.57	0.99	0.01	TRUE
6	Brain	Map2	intron excision ratio	chr9:67952936:67956162	0.06	0.03	lasso	15	0.03	5.9e-04	-0.34	5.1	3.2e-07	-0.06	0.91	0.05	TRUE
7	Brain	Lancl1	mRNA stability	ENSRNOG00000013557	0.08	0.07	top1	1	0.07	2.1e-07	-5.63	5.6	1.8e-08	-0.46	0.94	0.00	FALSE
8	Liver	Acadl	gene expression	ENSRNOG00000012966	0.08	0.02	enet	339	0.02	9.0e-04	1.11	-6.9	4.9e-12	0.77	0.63	0.05	TRUE
9	Liver	Lancl1	gene expression	ENSRNOG00000013557	0.59	0.34	enet	260	0.34	5.7e-39	-5.72	5.5	2.9e-08	-0.47	1.00	0.00	FALSE
10	Liver	Lancl1	mRNA stability	ENSRNOG00000013557	0.04	0.01	top1	1	0.01	1.0e-02	-5.72	5.7	1.1e-08	-0.35	0.07	0.03	FALSE
11	NAcc	NA	gene expression	ENSRNOG00000065023	0.04	0.02	blup	2473	0.03	3.8e-03	-5.61	-5.1	3.4e-07	0.28	0.51	0.41	FALSE
12	NAcc	NA	gene expression	ENSRNOG00000068276	0.12	0.08	blup	2373	0.09	4.6e-07	-5.53	5.7	1.0e-08	-0.58	0.57	0.43	FALSE
13	NAcc	Kansl1l	mRNA stability	ENSRNOG00000028149	0.04	0.04	top1	1	0.04	6.4e-04	-5.70	-5.7	1.2e-08	0.34	0.10	0.03	FALSE
14	OFC	Lancl1	gene expression	ENSRNOG00000013557	0.45	0.43	top1	1	0.43	2.2e-11	-5.69	5.7	1.3e-08	-0.29	0.90	0.01	FALSE
15	OFC	NA	gene expression	ENSRNOG00000068276	0.21	0.21	top1	1	0.21	1.3e-05	-5.64	5.6	1.7e-08	-0.36	0.14	0.05	FALSE
16	PL	Lancl1	gene expression	ENSRNOG00000013557	0.38	0.39	enet	77	0.41	4.8e-33	-5.68	5.2	2.3e-07	-0.36	0.99	0.01	FALSE

h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.