Hub : Traits : Tail length : ← →

chr10:105,364,159-107,179,560

Trait: Tail length

Best TWAS P=1.073404e-07 · Best GWAS P=2.449396e-07 conditioned to 1

Associated models

#	Tissue	Gene	Modality	RNA phenotype	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	Adipose	Csnk1d	alternative polyA	ENSRNOT00000106442	0.03	0.02	blup	1650	0.02	4.4e-03	-4.8	-5.1	3.4e-07	0.97	0.31	0.63	FALSE
2	Adipose	Ogfod3	gene expression	ENSRNOG00000036668	0.08	0.07	enet	6	0.08	6.7e-09	-4.9	5.3	1.1e-07	-0.91	0.31	0.69	FALSE
3	BLA	Slc16a3	gene expression	ENSRNOG00000036677	0.06	0.04	blup	1767	0.05	1.6e-03	-4.7	-5.1	3.0e-07	0.95	0.35	0.54	FALSE
4	Brain	Ccdc57	gene expression	ENSRNOG00000047531	0.17	0.16	lasso	2	0.17	3.5e-15	-4.9	-5.1	3.4e-07	0.94	0.36	0.64	FALSE
5	Liver	Dus1l	gene expression	ENSRNOG00000047905	0.07	0.02	enet	95	0.04	1.8e-05	-5.0	-5.3	1.1e-07	0.98	0.45	0.55	TRUE
6	Liver	Sectm1b	mRNA stability	ENSRNOG00000036673	0.05	0.01	blup	1573	0.03	9.8e-05	-4.9	-5.1	3.2e-07	0.89	0.37	0.62	FALSE
7	NAcc	Ccdc57	gene expression	ENSRNOG00000047531	0.06	0.03	blup	1793	0.05	1.2e-04	-5.0	-5.1	3.1e-07	0.96	0.42	0.57	FALSE

h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.