Hub : Traits : Tail length : ←

chr20:883,910-6,661,192

Trait: Tail length

Best TWAS P=2.78e-09 · Best GWAS P=3.01e-08 conditioned to NaN

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Ddr1	alternative TSS	NM_001166022.1	0.03	1269	0.01	8.3e-03	5.24	1.62e-07	0.2	FALSE
Adipose	Ddr1	alternative TSS	NM_001166022.1	0.02	1269	0.01	8.9e-03	5.2	2.01e-07	0.19	FALSE
Adipose	Gnl1	gene expression	Gnl1	0.07	8	0.06	1.8e-07	-5.33	9.95e-08	0.31	FALSE
Adipose	LOC108353253	isoform ratio	XR_005497429.1	0.61	2434	0.3	4.7e-34	-5.34	9.25e-08	0.59	TRUE
Adipose	Phf1	isoform ratio	NM_001414742.1	0.67	46	0.09	5.4e-10	-5.67	1.47e-08	0.12	FALSE
Adipose	LOC120093125	intron excision ratio	chr20_2617755_2617906	0.08	903	0.01	2.6e-02	5.21	1.94e-07	0.51	FALSE
Adipose	LOC120093125	intron excision ratio	chr20_2617755_2626735	0.08	903	0.01	2.7e-02	5.19	2.08e-07	0.51	FALSE
Adipose	LOC120093125	intron excision ratio	chr20_2624215_2624418	0.46	903	0.08	2.5e-09	-5.41	6.20e-08	0.42	FALSE
Adipose	LOC120093125	intron excision ratio	chr20_2626584_2635694	0.29	903	0.05	5.5e-06	-5.28	1.30e-07	0.75	FALSE
Adipose	LOC120093125	intron excision ratio	chr20_2626584_2657802	0.36	903	0.06	2.0e-07	-5.25	1.51e-07	0.76	FALSE
Adipose	LOC120093125	intron excision ratio	chr20_2670814_2671007	0.36	903	0.07	2.7e-08	5.25	1.55e-07	0.75	FALSE
Adipose	RT1-CE10	intron excision ratio	chr20_3298776_3357504	0.56	2843	0.01	5.6e-02	-5.19	2.13e-07	0.12	FALSE
Adipose	RT1-CE11	intron excision ratio	chr20_3258719_3357504	0.57	2800	0.01	3.8e-02	-5.19	2.15e-07	0.14	FALSE
Adipose	RT1-CE11	intron excision ratio	chr20_3277094_3357504	0.57	2800	0.01	3.7e-02	-5.18	2.19e-07	0.14	FALSE
Adipose	RT1-CE11	intron excision ratio	chr20_3298776_3357504	0.57	2800	0.01	5.8e-02	-5.21	1.91e-07	0.13	FALSE
Adipose	RT1-CE12	intron excision ratio	chr20_3258719_3357504	0.58	2760	0.01	3.9e-02	-5.18	2.18e-07	0.14	FALSE
Adipose	RT1-CE12	intron excision ratio	chr20_3277094_3357504	0.58	2760	0.01	3.8e-02	-5.18	2.22e-07	0.14	FALSE
Adipose	RT1-CE5	intron excision ratio	chr20_3436430_3478842	0.9	26	0.1	2.1e-11	5.51	3.52e-08	0.56	FALSE
Adipose	RT1-S3	intron excision ratio	chr20_2670814_2671007	0.26	1075	0.07	5.2e-08	5.27	1.36e-07	0.69	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2691672_2691881	0.49	1129	0.07	3.2e-08	5.4	6.67e-08	0.32	FALSE
Adipose	Taf11	intron excision ratio	chr20_5956380_5957018	0.12	1	0.01	4.2e-02	5.25	1.48e-07	0.06	FALSE
BLA	Lst1	alternative TSS	NM_022634.2	0.1	15	0.04	5.4e-03	5.2	2.02e-07	0.1	TRUE
BLA	Lst1	alternative TSS	XM_006256080.4	0.1	15	0.04	5.3e-03	-5.2	1.96e-07	0.1	FALSE
BLA	RT1-N3	alternative TSS	NM_001008855.2	0.46	34	0.18	9.7e-10	-5.18	2.24e-07	0.56	FALSE
BLA	Dhx16	gene expression	Dhx16	0.12	1315	0.06	3.1e-04	-5.46	4.85e-08	0.29	FALSE
BLA	RT1-T24-2	gene expression	RT1-T24-2	0.23	1239	0.17	1.6e-09	-5.35	8.94e-08	0.31	FALSE
BLA	Cchcr1	isoform ratio	XM_039098942.1	0.09	2249	0.02	3.2e-02	5.34	9.30e-08	0.23	FALSE
BLA	RT1-M6-2	isoform ratio	XM_017601696.2	0.08	2861	0.04	5.7e-03	-5.19	2.09e-07	0.34	FALSE
BLA	RT1-N3	isoform ratio	XM_006255908.4	0.51	27	0.27	7.9e-15	5.26	1.47e-07	0.44	FALSE
Brain	Dhx16	alternative polyA	XM_039098481.1	0.22	1315	0.13	5.7e-12	5.54	3.10e-08	0.3	TRUE
Brain	LOC120093125	alternative polyA	XM_039099257.1	0.17	948	0.14	5.8e-13	-5.32	1.04e-07	0.41	FALSE
Brain	LOC120093125	alternative polyA	XM_039099257.1	0.17	948	0.14	1.3e-12	-5.33	1.00e-07	0.4	FALSE
Brain	Neu1	alternative TSS	NM_031522.3	0.12	32	0.06	1.8e-06	5.2	1.94e-07	0.44	FALSE
Brain	Neu1	alternative TSS	XM_039098415.1	0.12	33	0.06	1.3e-06	-5.22	1.79e-07	0.45	FALSE
Brain	RT1-N3	alternative TSS	XM_039098420.1	0.72	12	0.15	3.3e-14	5.22	1.80e-07	0.68	FALSE
Brain	RT1-CE13	gene expression	RT1-CE13	0.16	2580	0.1	2.3e-09	-5.39	7.24e-08	0.48	FALSE
Brain	LOC120093125	isoform ratio	XM_039099258.1	0.26	7	0.15	1.9e-13	5.37	7.97e-08	0.54	FALSE
Brain	RT1-N2	isoform ratio	XM_039098783.1	0.28	17	0.36	2.8e-34	-5.2	2.03e-07	0.4	FALSE
Brain	RT1-S3	isoform ratio	NM_001008886.2	0.05	1120	0.04	1.7e-04	-5.43	5.69e-08	0.39	FALSE
Brain	RT1-S3	isoform ratio	XM_006255917.4	0.05	1120	0.04	1.4e-04	5.43	5.69e-08	0.4	FALSE
Brain	Prr3	intron excision ratio	chr20_2793415_2793683	0.05	1262	0.02	7.9e-03	-5.25	1.51e-07	0.33	FALSE
Brain	RT1-CE10	intron excision ratio	chr20_3276101_3276342	0.25	28	0.14	1.5e-12	-5.91	3.52e-09	0.25	FALSE
Brain	RT1-CE14	intron excision ratio	chr20_3276101_3276342	0.23	31	0.14	1.1e-12	-5.93	3.11e-09	0.32	FALSE
Brain	RT1-CE15	intron excision ratio	chr20_3276101_3276342	0.23	21	0.14	1.2e-12	-5.84	5.33e-09	0.36	FALSE
Brain	RT1-CE16	intron excision ratio	chr20_3276101_3276342	0.23	20	0.14	1.4e-12	-5.78	7.69e-09	0.37	FALSE
Eye	LOC120093125	isoform ratio	XM_039099255.1	0.42	33	0.13	5.6e-03	-5.43	5.66e-08	0.18	TRUE
IL	LOC120093125	alternative polyA	XM_039099255.1	0.4	948	0.17	6.9e-05	5.36	8.32e-08	0.38	FALSE
IL	LOC120093125	isoform ratio	XM_039099257.1	0.31	948	0.21	7.1e-06	-5.36	8.35e-08	0.38	FALSE
IL	RT1-N2	isoform ratio	XM_039098786.1	0.64	10	0.36	1.2e-09	5.31	1.10e-07	0.4	FALSE
IL	Abcf1	intron excision ratio	chr20_2802656_2807786	0.25	1268	0.12	8.4e-04	-5.34	9.10e-08	0.28	FALSE
LHb	RT1-N3	alternative TSS	XM_039098420.1	0.37	1052	0.17	9.0e-05	-5.42	6.04e-08	0.36	FALSE
LHb	Ilrun	gene expression	Ilrun	0.81	1	0.27	3.3e-07	5.23	1.69e-07	0.58	FALSE
LHb	RT1-CE4	mRNA stability	RT1-CE4	0.49	280	0.19	2.7e-05	-5.94	2.78e-09	0.14	TRUE
Liver	LOC120093125	alternative polyA	XM_039099255.1	0.38	17	0.15	3.0e-16	5.24	1.62e-07	0.42	FALSE
Liver	LOC120093125	alternative polyA	XM_039099257.1	0.47	26	0.22	4.3e-24	-5.2	2.02e-07	0.41	FALSE
Liver	LOC120093125	alternative polyA	XM_039099255.1	0.35	19	0.18	4.6e-19	5.24	1.56e-07	0.41	FALSE
Liver	LOC120093125	alternative polyA	XM_039099257.1	0.41	160	0.19	6.2e-21	5.42	5.80e-08	0.41	FALSE
Liver	LOC120098967	alternative polyA	XR_005497790.1	0.09	1213	0.05	1.1e-06	-5.27	1.33e-07	0.57	FALSE
Liver	LOC120098967	alternative polyA	XR_005497791.1	0.1	1213	0.06	9.0e-07	5.28	1.32e-07	0.56	FALSE
Liver	RT1-N2	alternative polyA	XM_017601671.2	0.83	22	0.22	5.7e-24	5.2	1.98e-07	0.41	FALSE
Liver	Abcf1	gene expression	Abcf1	0.14	1223	0.11	3.3e-12	5.28	1.29e-07	0.3	FALSE
Liver	Abcf1	isoform ratio	XM_017601783.2	0.06	1223	0.05	3.4e-06	-5.21	1.91e-07	0.3	FALSE
Liver	LOC120093125	isoform ratio	XM_039099255.1	0.84	145	0.3	3.6e-33	-5.21	1.92e-07	0.4	FALSE
Liver	RT1-N2	isoform ratio	XM_039098783.1	0.3	34	0.29	2.4e-32	5.23	1.66e-07	0.41	FALSE
Liver	RT1-T24-4	intron excision ratio	chr20_2741803_2741939	0.19	1129	0.03	7.2e-04	-5.35	8.66e-08	0.28	FALSE
NAcc	Dhx16	alternative polyA	XM_039098481.1	0.14	1315	0.06	5.3e-08	5.78	7.42e-09	0.3	FALSE
NAcc	RT1-N3	alternative TSS	NM_001008855.2	0.06	1052	0.04	3.5e-05	5.2	1.95e-07	0.7	FALSE
NAcc	RT1-N3	alternative TSS	XM_039098420.1	0.19	32	0.17	1.4e-19	-5.21	1.94e-07	0.34	FALSE
NAcc	Nudt3	gene expression	Nudt3	0.2	74	0.11	2.2e-12	-5.31	1.09e-07	0.85	FALSE
NAcc	RT1-N3	isoform ratio	XM_039098420.1	0.27	17	0.24	2.7e-27	-5.35	8.85e-08	0.34	FALSE
NAcc	RT1-S3	isoform ratio	NM_001008886.2	0.08	1120	0.05	3.4e-06	-5.21	1.91e-07	0.68	FALSE
NAcc	RT1-S3	isoform ratio	XM_006255917.4	0.09	1120	0.05	2.6e-06	5.22	1.78e-07	0.68	FALSE
NAcc	RT1-CE4	mRNA stability	RT1-CE4	0.15	2968	0.07	3.4e-08	5.27	1.33e-07	0.06	FALSE
OFC	RT1-N2	alternative polyA	XM_017601671.2	0.43	999	0.3	6.7e-08	5.24	1.62e-07	0.39	FALSE
OFC	RT1-CE13	gene expression	RT1-CE13	0.23	2580	0.15	2.6e-04	-5.25	1.51e-07	0.14	FALSE
OFC	RT1-N2	isoform ratio	XM_039098783.1	0.49	27	0.43	2.4e-11	5.19	2.12e-07	0.39	FALSE
OFC	RT1-N3	isoform ratio	XM_006255908.4	0.23	1052	0.09	4.4e-03	5.43	5.63e-08	0.35	FALSE
OFC	RT1-N3	isoform ratio	XM_039098420.1	0.24	1052	0.18	5.0e-05	-5.36	8.32e-08	0.44	FALSE
OFC	RT1-CE7	intron excision ratio	chr20_3503725_3503935	0.36	31	0.19	3.6e-05	-5.22	1.79e-07	0.08	FALSE
PL	RT1-N3	alternative TSS	XM_039098420.1	0.23	20	0.27	3.7e-29	-5.41	6.22e-08	0.33	TRUE
PL	RT1-N3	alternative TSS	NM_001008855.2	0.12	1052	0.11	4.7e-12	5.43	5.70e-08	0.36	FALSE
PL	RT1-N3	alternative TSS	XM_039098421.1	0.05	1052	0.03	2.2e-04	-5.43	5.64e-08	0.45	FALSE
PL	Dhx16	gene expression	Dhx16	0.11	1315	0.09	6.3e-10	-5.43	5.60e-08	0.3	FALSE
pVTA	RT1-N3	alternative TSS	NM_001008855.2	0.16	1052	0.1	4.6e-05	5.24	1.57e-07	0.64	FALSE
pVTA	LOC108349027	gene expression	LOC108349027	0.25	10	0.11	1.6e-05	-5.27	1.39e-07	0.54	FALSE
pVTA	Abcf1	isoform ratio	NM_001109883.2	0.15	1268	0.06	1.4e-03	5.18	2.25e-07	0.25	TRUE
RMTg	Cchcr1	gene expression	Cchcr1	0.44	32	0.28	2.8e-08	5.57	2.59e-08	0.7	FALSE