Hub : Traits : Tail length : ←

chr20:800,195-6,388,285

Trait: Tail length

Best TWAS P = 7.42e-11 · Best GWAS P= 2.33e-07 conditioned to NaN

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	RT1-N2	alternative polyA	XM_063279192.1	0.53	250	0.3	2.0e-33	5.27	1.40e-07	0.65	TRUE
Adipose	Flot1	alternative TSS	NM_022701.2	0.03	8	0.02	5.9e-03	-5.5	3.84e-08	0.47	FALSE
Adipose	Flot1	alternative TSS	XM_063279499.1	0.08	5	0.04	4.3e-05	5.72	1.08e-08	0.57	FALSE
Adipose	Dhx16	gene expression	Dhx16	0.19	1524	0.18	8.5e-20	-5.35	8.87e-08	0.6	FALSE
Adipose	Gtf2h4	gene expression	Gtf2h4	0.18	29	0.14	8.4e-16	5.46	4.81e-08	0.6	FALSE
Adipose	RT1-T24-3	isoform ratio	XM_063279402.1	0.04	1390	0.03	8.2e-04	5.21	1.87e-07	0.45	FALSE
Adipose	H2-Q7-ps1	intron excision ratio	chr20_2629035_2629238	0.35	1164	0.05	3.8e-06	-5.5	3.86e-08	0.57	FALSE
Adipose	H2-Q7-ps1	intron excision ratio	chr20_2631404_2640514	0.23	7	0.04	1.2e-05	-5.38	7.32e-08	0.54	FALSE
Adipose	H2-Q7-ps1	intron excision ratio	chr20_2637860_2638063	0.35	1164	0.05	3.8e-06	-5.5	3.86e-08	0.57	FALSE
Adipose	RT1-O1l1	intron excision ratio	chr20_2629035_2629238	0.35	1156	0.05	3.9e-06	-5.5	3.85e-08	0.57	FALSE
Adipose	RT1-O1l1	intron excision ratio	chr20_2631404_2640514	0.23	7	0.04	1.2e-05	-5.38	7.34e-08	0.54	FALSE
Adipose	RT1-O1l1	intron excision ratio	chr20_2637860_2638063	0.35	1156	0.05	3.9e-06	-5.5	3.85e-08	0.57	FALSE
Adipose	RT1-S3	intron excision ratio	chr20_2629035_2629238	0.34	1303	0.05	3.9e-06	-5.51	3.59e-08	0.54	FALSE
Adipose	RT1-S3	intron excision ratio	chr20_2637860_2638063	0.34	1303	0.05	3.9e-06	-5.51	3.59e-08	0.54	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2696490_2696699	0.59	1357	0.15	1.4e-16	5.24	1.64e-07	0.55	FALSE
Adipose	Ppp1r10	mRNA stability	Ppp1r10	0.03	1532	0.01	7.0e-03	5.42	6.02e-08	0.44	FALSE
BLA	RT1-M6-2	alternative polyA	NM_001008853.1	0.06	3124	0.01	6.2e-02	5.36	8.13e-08	0.19	FALSE
BLA	RT1-M6-2	alternative polyA	XM_017601696.2	0.06	3124	0.03	1.7e-02	-5.34	9.27e-08	0.18	FALSE
BLA	RT1-N2	alternative polyA	XM_039098782.2	0.22	1195	0.13	2.9e-07	5.3	1.18e-07	0.63	FALSE
BLA	RT1-T18	alternative TSS	XM_063279363.1	0.49	9	0.09	1.4e-05	-5.67	1.42e-08	0.64	FALSE
BLA	Ddr1	gene expression	Ddr1	0.34	5	0.26	3.4e-14	5.25	1.55e-07	0.56	FALSE
BLA	Gtf2h4	gene expression	Gtf2h4	0.19	14	0.15	3.5e-08	5.25	1.55e-07	0.59	FALSE
BLA	LOC134483846	gene expression	LOC134483846	0.79	43	0.71	4.3e-52	5.22	1.79e-07	0.62	FALSE
BLA	RT1-M6-2	isoform ratio	XM_017601696.2	0.1	3124	0.07	9.5e-05	-5.26	1.43e-07	0.23	FALSE
BLA	Abcf1	intron excision ratio	chr20_2807464_2811704	0.08	1500	0.03	6.9e-03	5.22	1.78e-07	0.28	FALSE
BLA	Dhx16	intron excision ratio	chr20_2868362_2869501	0.1	8	0.02	2.5e-02	-5.44	5.27e-08	0.27	FALSE
BLA	RT1-CE10	intron excision ratio	chr20_3280797_3281038	0.27	3056	0.04	3.7e-03	5.6	2.17e-08	0.42	TRUE
BLA	RT1-CE11	intron excision ratio	chr20_3280797_3281038	0.27	3055	0.04	3.7e-03	5.6	2.17e-08	0.42	FALSE
BLA	RT1-CE14	intron excision ratio	chr20_3280797_3281038	0.25	2648	0.04	4.0e-03	5.69	1.30e-08	0.4	FALSE
BLA	RT1-CE15	intron excision ratio	chr20_3280797_3281038	0.25	154	0.04	2.7e-03	6.34	2.27e-10	0.4	FALSE
BLA	RT1-CE16	intron excision ratio	chr20_3280797_3281038	0.26	2619	0.04	4.7e-03	5.75	9.16e-09	0.4	FALSE
Brain	Dhx16	alternative polyA	XM_039098481.2	0.23	1524	0.15	6.3e-14	5.67	1.42e-08	0.58	FALSE
Brain	RT1-N2	alternative polyA	XM_039098782.2	0.36	30	0.32	7.5e-31	5.86	4.51e-09	0.66	FALSE
Brain	RT1-N2	alternative polyA	XM_039098782.2	0.36	29	0.33	8.7e-32	5.77	7.93e-09	0.66	TRUE
Brain	Dhx16	alternative TSS	XM_039098484.2	0.06	1524	0.03	6.8e-04	5.27	1.35e-07	0.46	FALSE
Brain	Gabbr1	isoform ratio	NM_031028.3	0.05	3649	0.04	1.3e-04	-5.28	1.32e-07	0.35	FALSE
Brain	RT1-M6-2	isoform ratio	XM_017601696.2	0.23	19	0.24	3.7e-22	-5.21	1.88e-07	0.11	FALSE
Brain	RT1-M6-2	isoform ratio	XM_063279325.1	0.15	170	0.16	7.2e-15	5.33	9.96e-08	0.12	FALSE
Brain	Zfp57	isoform ratio	XM_039098787.2	0.07	3517	0.04	1.2e-04	-5.21	1.87e-07	0.41	FALSE
Brain	Znrd1as1	intron excision ratio	chr20_1592067_1595158	0.03	2915	0.01	1.7e-02	5.32	1.01e-07	0.25	FALSE
Brain	RT1-M6-2	mRNA stability	RT1-M6-2	0.76	51	0.54	5.4e-60	-5.21	1.89e-07	0.13	FALSE
Brain	Trim15	mRNA stability	Trim15	0.06	32	0.04	1.2e-04	5.26	1.43e-07	0.34	FALSE
Eye	Mrps18b	alternative polyA	NM_212534.2	0.43	1532	0.05	5.8e-02	5.29	1.21e-07	0.18	FALSE
Eye	Mrps18b	alternative polyA	XM_039098476.2	0.44	1532	0.06	5.1e-02	-5.31	1.12e-07	0.18	FALSE
Eye	H2-Q7-ps1	intron excision ratio	chr20_2631404_2662623	0.76	1164	0.19	7.7e-04	-5.52	3.47e-08	0.28	FALSE
Eye	RT1-O1l1	intron excision ratio	chr20_2631404_2662623	0.76	1156	0.19	7.7e-04	-5.52	3.48e-08	0.28	FALSE
Eye	RT1-S2	intron excision ratio	chr20_2631404_2662623	0.77	1208	0.19	7.6e-04	-5.51	3.55e-08	0.28	FALSE
Eye	RT1-CE4	mRNA stability	RT1-CE4	0.39	3147	0.07	3.2e-02	5.23	1.72e-07	0.12	FALSE
IC	Znrd1as1	gene expression	Znrd1as1	0.22	80	0.13	3.0e-06	5.31	1.10e-07	0.4	FALSE
IC	Dhx16	intron excision ratio	chr20_2868393_2869501	0.14	1524	0.01	1.4e-01	5.78	7.53e-09	0.22	FALSE
IL	RT1-CE15	alternative polyA	NM_001008838.2	0.22	2609	0.05	2.9e-02	-5.69	1.24e-08	0.24	FALSE
IL	RT1-N2	alternative polyA	XM_039098782.2	0.32	1195	0.17	8.5e-05	5.46	4.88e-08	0.58	FALSE
IL	RT1-N2	alternative polyA	XM_039098782.2	0.41	1195	0.2	1.2e-05	5.65	1.61e-08	0.61	FALSE
IL	RT1-O1l1	alternative polyA	XM_039099255.2	0.26	1156	0.13	5.4e-04	5.56	2.64e-08	0.52	FALSE
IL	RT1-O1l1	gene expression	RT1-O1l1	0.78	1156	0.46	1.1e-12	-5.34	9.30e-08	0.66	FALSE
IL	Abcf1	isoform ratio	NM_001109883.2	0.23	1500	0.14	3.8e-04	5.51	3.65e-08	0.4	FALSE
IL	Abcf1	isoform ratio	XM_017601783.3	0.22	1500	0.13	5.6e-04	-5.5	3.75e-08	0.38	FALSE
IL	RT1-T24-4	isoform ratio	NM_001008826.3	0.31	1357	0.15	1.7e-04	5.55	2.91e-08	0.44	FALSE
IL	Abcf1	intron excision ratio	chr20_2807464_2812594	0.27	1500	0.12	9.7e-04	-5.47	4.55e-08	0.42	FALSE
IL	LOC134483846	intron excision ratio	chr20_2630996_2650951	0.41	1390	0.19	2.5e-05	-5.58	2.45e-08	0.5	FALSE
IL	LOC134483846	intron excision ratio	chr20_2639816_2650951	0.41	1390	0.19	2.5e-05	-5.58	2.45e-08	0.5	FALSE
IL	RT1-A2	intron excision ratio	chr20_4909750_4909928	0.57	874	0.35	3.1e-09	-5.32	1.02e-07	0.29	FALSE
LHb	Znrd1as1	gene expression	Znrd1as1	0.24	2915	0.03	7.9e-02	5.35	8.68e-08	0.21	FALSE
LHb	RT1-T24-4	isoform ratio	NM_001008826.3	0.42	21	0.21	1.0e-05	5.25	1.51e-07	0.55	FALSE
Liver	RT1-N2	alternative polyA	XM_039098782.2	0.34	15	0.34	3.7e-39	5.34	9.51e-08	0.68	FALSE
Liver	RT1-N2	alternative polyA	XM_039098782.2	0.36	15	0.35	7.9e-40	5.53	3.21e-08	0.68	FALSE
Liver	RT1-O1l1	alternative polyA	XM_039099255.2	0.28	4	0.19	1.6e-20	5.79	7.12e-09	0.68	FALSE
Liver	RT1-S2	alternative polyA	NM_001008857.1	0.27	1208	0.24	1.2e-26	-5.25	1.53e-07	0.64	FALSE
Liver	Abcf1	gene expression	Abcf1	0.14	1500	0.12	1.0e-12	5.45	5.04e-08	0.58	FALSE
Liver	Dhx16	gene expression	Dhx16	0.16	1524	0.13	1.4e-14	-5.47	4.49e-08	0.59	FALSE
Liver	Gtf2h4	gene expression	Gtf2h4	0.3	224	0.29	4.9e-33	5.29	1.22e-07	0.6	FALSE
Liver	Abcf1	isoform ratio	NM_001109883.2	0.05	1500	0.04	3.2e-05	5.41	6.30e-08	0.54	FALSE
Liver	Abcf1	isoform ratio	XM_017601783.3	0.06	1500	0.04	1.1e-05	-5.38	7.51e-08	0.54	FALSE
Liver	RT1-N2	isoform ratio	XM_039098783.2	0.41	19	0.4	1.4e-47	5.27	1.38e-07	0.66	FALSE
Liver	RT1-O1l1	isoform ratio	XM_039099255.2	0.29	7	0.29	2.1e-32	5.55	2.78e-08	0.68	FALSE
Liver	RT1-O1l1	isoform ratio	XM_039099257.2	0.42	13	0.39	3.0e-46	-5.25	1.49e-07	0.67	FALSE
Liver	LOC134483846	intron excision ratio	chr20_2727582_2729544	0.46	4	0.09	2.7e-10	-5.42	6.09e-08	0.59	FALSE
Liver	RT1-CE10	intron excision ratio	chr20_3362457_3384434	0.58	447	0.19	1.4e-20	-5.23	1.69e-07	0	FALSE
Liver	RT1-CE10	intron excision ratio	chr20_3384252_3384434	0.56	426	0.19	5.1e-21	5.22	1.80e-07	0	TRUE
Liver	RT1-CE11	intron excision ratio	chr20_3362457_3384434	0.58	435	0.19	1.4e-20	-5.26	1.45e-07	0	FALSE
Liver	RT1-CE11	intron excision ratio	chr20_3384252_3384434	0.56	388	0.19	4.9e-21	5.33	1.00e-07	0	FALSE
Liver	Znrd1as1	intron excision ratio	chr20_1592067_1595158	0.16	2915	0.05	1.7e-06	5.31	1.11e-07	0.09	FALSE
NAcc	Dhx16	alternative polyA	XM_039098481.2	0.08	9	0.08	1.6e-12	5.62	1.90e-08	0.58	FALSE
NAcc	Prr3	alternative TSS	XM_063279198.1	0.04	1496	0.03	8.7e-06	-5.56	2.74e-08	0.57	FALSE
NAcc	Prr3	alternative TSS	XM_063279199.1	0.03	1496	0.02	4.4e-04	5.22	1.80e-07	0.55	FALSE
NAcc	Prr3	alternative TSS	XM_063279198.1	0.04	1496	0.03	1.7e-05	-5.58	2.41e-08	0.58	FALSE
NAcc	Prr3	alternative TSS	XM_063279199.1	0.04	1496	0.03	9.5e-06	5.56	2.64e-08	0.57	FALSE
NAcc	RT1-M6-2	alternative TSS	XM_017601696.2	0.03	3124	0.04	4.2e-06	5.38	7.38e-08	0.13	FALSE
NAcc	RT1-M6-2	alternative TSS	XM_017601696.2	0.04	3124	0.04	6.1e-07	5.35	8.75e-08	0.09	FALSE
NAcc	Dhx16	gene expression	Dhx16	0.08	1524	0.06	4.8e-10	-5.51	3.69e-08	0.58	FALSE
NAcc	RT1-T24-2	gene expression	RT1-T24-2	0.04	1416	0.03	7.6e-05	5.52	3.36e-08	0.55	FALSE
NAcc	Dhx16	isoform ratio	NM_212496.2	0.06	1524	0.05	2.0e-08	5.47	4.61e-08	0.52	FALSE
NAcc	Prr3	isoform ratio	NM_212544.2	0.03	1496	0.02	3.0e-04	5.49	4.12e-08	0.5	FALSE
NAcc	RT1-T24-4	isoform ratio	NM_001008826.3	0.35	90	0.15	1.5e-22	6.14	8.51e-10	0.48	FALSE
NAcc	Prr3	intron excision ratio	chr20_2798224_2798492	0.02	1496	0.02	1.5e-03	-5.28	1.28e-07	0.43	FALSE
NAcc	RT1-T24-4	intron excision ratio	chr20_2746170_2746348	0.04	1357	0.02	1.1e-04	5.64	1.72e-08	0.59	FALSE
NAcc	Nudt3	mRNA stability	Nudt3	0.07	2415	0.03	6.5e-05	5.38	7.53e-08	0.8	FALSE
OFC	RT1-N2	alternative polyA	XM_039098782.2	0.43	1195	0.32	2.6e-08	5.57	2.62e-08	0.64	FALSE
OFC	RT1-CE13	isoform ratio	XM_063279407.1	0.14	2740	0.1	3.0e-03	5.23	1.71e-07	0.21	FALSE
OFC	RT1-O1l1	isoform ratio	XM_039099255.2	0.43	1156	0.35	3.6e-09	5.41	6.14e-08	0.65	FALSE
OFC	RT1-T24-4	isoform ratio	NM_001008826.3	0.49	1357	0.34	5.2e-09	5.65	1.61e-08	0.59	FALSE
OFC	LOC134483846	intron excision ratio	chr20_2630996_2650951	0.38	22	0.17	7.2e-05	-5.43	5.50e-08	0.49	TRUE
OFC	LOC134483846	intron excision ratio	chr20_2639816_2650951	0.38	22	0.17	8.7e-05	-5.43	5.52e-08	0.49	FALSE
PL	Dhx16	gene expression	Dhx16	0.09	1524	0.09	6.3e-10	-5.52	3.40e-08	0.6	FALSE
PL	Gtf2h4	gene expression	Gtf2h4	0.11	1495	0.13	1.0e-13	5.45	5.02e-08	0.6	FALSE
PL	RT1-T24-2	gene expression	RT1-T24-2	0.77	1416	0.1	5.5e-11	6.51	7.42e-11	0.6	TRUE
PL	Ddr1	isoform ratio	XM_063278984.1	0.04	21	0.03	2.8e-04	5.38	7.55e-08	0.45	FALSE
PL	Dhx16	isoform ratio	NM_212496.2	0.04	1524	0.03	2.4e-04	5.26	1.46e-07	0.51	FALSE
PL	RT1-S2	isoform ratio	XM_063278970.1	0.34	8	0.17	5.3e-18	-5.23	1.70e-07	0.62	FALSE
PL	Zfp57	isoform ratio	NM_213565.4	0.04	3517	0.03	1.6e-04	5.35	8.76e-08	0.25	FALSE
PL	Zfp57	isoform ratio	XM_039098787.2	0.03	3517	0.03	2.8e-04	-5.31	1.10e-07	0.32	FALSE
PL	RT1-A2	intron excision ratio	chr20_4852635_4852768	0.38	95	0.29	2.4e-32	-5.46	4.76e-08	0.34	TRUE
PL	RT1-CE10	intron excision ratio	chr20_3280797_3281038	0.14	3056	0.12	4.8e-13	5.22	1.83e-07	0.19	FALSE
PL	RT1-CE11	intron excision ratio	chr20_3280797_3281038	0.14	3055	0.12	4.8e-13	5.22	1.83e-07	0.19	FALSE
PL	RT1-CE14	intron excision ratio	chr20_3280797_3281038	0.13	2648	0.12	4.8e-13	5.22	1.81e-07	0.18	FALSE
PL	RT1-CE15	intron excision ratio	chr20_3280797_3281038	0.13	2609	0.12	4.7e-13	5.22	1.77e-07	0.19	FALSE
PL	RT1-CE16	intron excision ratio	chr20_3280797_3281038	0.13	2619	0.12	5.2e-13	5.22	1.76e-07	0.2	FALSE
PL	Trim15	mRNA stability	Trim15	0.03	2465	0.03	8.1e-04	5.38	7.61e-08	0.19	FALSE
pVTA	Trim15	alternative polyA	NM_001291382.2	0.17	44	0.15	2.4e-12	-5.23	1.73e-07	0.13	FALSE
pVTA	Tubb5	gene expression	Tubb5	0.08	8	0.07	4.2e-06	5.58	2.38e-08	0.6	FALSE