Best TWAS P=1.79e-11 · Best GWAS P=8.08e-12 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Gls | alternative polyA | NM_012569.4 | 0.28 | 1360 | 0.03 | 5.5e-04 | -5.21 | 1.89e-07 | 0.51 | FALSE |
| Adipose | Osgepl1 | alternative polyA | NM_001394068.1 | 0.04 | 2335 | 0 | 8.5e-02 | 5.99 | 2.16e-09 | 0.3 | FALSE |
| Adipose | Osgepl1 | alternative polyA | NM_001394070.1 | 0.11 | 2335 | 0.05 | 3.8e-06 | -5.54 | 3.06e-08 | 0.42 | FALSE |
| Adipose | Osgepl1 | alternative polyA | NM_001394068.1 | 0.11 | 2335 | 0.04 | 1.3e-05 | 5.57 | 2.55e-08 | 0.42 | FALSE |
| Adipose | Osgepl1 | alternative polyA | NM_001394070.1 | 0.11 | 2335 | 0.04 | 1.3e-05 | -5.54 | 3.02e-08 | 0.41 | FALSE |
| Adipose | Ormdl1 | alternative TSS | NM_001134704.2 | 0.03 | 2309 | 0 | 1.6e-01 | 5.2 | 1.95e-07 | 0.14 | FALSE |
| Adipose | Ormdl1 | alternative TSS | XM_039082897.1 | 0.03 | 2309 | 0 | 1.9e-01 | -5.21 | 1.94e-07 | 0.13 | FALSE |
| Adipose | Ankar | gene expression | Ankar | 0.07 | 1 | 0.03 | 2.5e-04 | -6.46 | 1.02e-10 | 0.05 | FALSE |
| Adipose | Asnsd1 | gene expression | Asnsd1 | 0.15 | 1 | 0.07 | 1.9e-08 | -6.47 | 9.88e-11 | 0.39 | FALSE |
| Adipose | Col5a2 | gene expression | Col5a2 | 0.05 | 98 | 0.03 | 2.1e-04 | -6.01 | 1.84e-09 | 0.42 | FALSE |
| Adipose | LOC685203 | gene expression | LOC685203 | 0.05 | 2221 | 0.02 | 3.3e-03 | -5.48 | 4.23e-08 | 0.34 | FALSE |
| Adipose | Mrps9 | gene expression | Mrps9 | 0.14 | 1 | 0.09 | 4.4e-10 | 5.66 | 1.47e-08 | 0.62 | FALSE |
| Adipose | Nck2 | gene expression | Nck2 | 0.05 | 1 | 0.03 | 1.0e-04 | 5.52 | 3.32e-08 | 0.07 | FALSE |
| Adipose | Osgepl1 | gene expression | Osgepl1 | 0.03 | 2335 | 0.01 | 1.9e-02 | -5.34 | 9.06e-08 | 0.14 | FALSE |
| Adipose | RGD1310553 | gene expression | RGD1310553 | 0.13 | 1 | 0.05 | 1.3e-06 | -5.34 | 9.08e-08 | 0.18 | FALSE |
| Adipose | Srsf7-ps4 | gene expression | Srsf7-ps4 | 0.04 | 2168 | 0.01 | 8.2e-03 | -5.52 | 3.32e-08 | 0.3 | FALSE |
| Adipose | Tpp2 | gene expression | Tpp2 | 0.02 | 1 | 0.01 | 7.0e-02 | -5.22 | 1.75e-07 | 0.03 | FALSE |
| Adipose | Wdr75 | gene expression | Wdr75 | 0.2 | 2185 | 0.12 | 7.2e-13 | -6.43 | 1.27e-10 | 0.39 | FALSE |
| Adipose | Gls | isoform ratio | NM_012569.4 | 0.28 | 1360 | 0.01 | 2.0e-02 | -5.29 | 1.25e-07 | 0.62 | FALSE |
| Adipose | Gls | isoform ratio | XM_039083009.1 | 0.05 | 53 | 0.01 | 6.0e-02 | -5.44 | 5.41e-08 | 0.46 | FALSE |
| Adipose | Ormdl1 | isoform ratio | NM_001134704.2 | 0.26 | 1 | 0.14 | 1.8e-15 | -6.11 | 9.71e-10 | 0.09 | FALSE |
| Adipose | Ormdl1 | isoform ratio | XM_039082897.1 | 0.25 | 1 | 0.14 | 4.5e-15 | 5.98 | 2.25e-09 | 0.04 | FALSE |
| Adipose | Osgepl1 | isoform ratio | NM_001394068.1 | 0.08 | 2335 | 0.04 | 8.1e-05 | 6.17 | 6.68e-10 | 0.44 | FALSE |
| Adipose | Osgepl1 | isoform ratio | NM_001394070.1 | 0.04 | 2335 | 0.01 | 3.0e-02 | -5.28 | 1.32e-07 | 0.18 | FALSE |
| Adipose | RGD1310553 | isoform ratio | NM_001008517.2 | 0.04 | 18 | 0.03 | 1.2e-04 | 5.54 | 3.01e-08 | 0.28 | FALSE |
| Adipose | RGD1310553 | isoform ratio | XM_039083263.1 | 0.04 | 26 | 0.03 | 1.5e-04 | -5.54 | 3.00e-08 | 0.28 | FALSE |
| Adipose | Osgepl1 | intron excision ratio | chr9_48221742_48223241 | 0.07 | 1 | 0.03 | 7.7e-04 | -6.09 | 1.10e-09 | 0.03 | FALSE |
| Adipose | Bivm | mRNA stability | Bivm | 0.14 | 1 | 0.12 | 3.2e-13 | -5.22 | 1.75e-07 | 0.61 | FALSE |
| Adipose | Col5a2 | mRNA stability | Col5a2 | 0.07 | 1 | 0.03 | 2.6e-04 | -6.5 | 8.04e-11 | 0.12 | FALSE |
| Adipose | Ercc5 | mRNA stability | Ercc5 | 0.38 | 40 | 0.3 | 7.5e-34 | -5.18 | 2.19e-07 | 0.5 | FALSE |
| Adipose | Mrps9 | mRNA stability | Mrps9 | 0.44 | 255 | 0.27 | 1.7e-30 | 5.72 | 1.08e-08 | 0.31 | FALSE |
| Adipose | RGD1310553 | mRNA stability | RGD1310553 | 0.11 | 2963 | 0.05 | 7.4e-06 | 5.99 | 2.16e-09 | 0.33 | FALSE |
| Adipose | Tgfbrap1 | mRNA stability | Tgfbrap1 | 0.19 | 1 | 0.11 | 5.9e-12 | 5.19 | 2.07e-07 | 0.1 | FALSE |
| Adipose | Wdr75 | mRNA stability | Wdr75 | 0.28 | 34 | 0.12 | 1.3e-13 | 6.52 | 7.19e-11 | 0.35 | FALSE |
| BLA | Mfsd6 | alternative polyA | NM_001106911.1 | 0.09 | 1908 | 0.06 | 4.6e-04 | 5.37 | 8.08e-08 | 0.32 | FALSE |
| BLA | LOC685203 | gene expression | LOC685203 | 0.13 | 86 | 0.04 | 4.4e-03 | -5.46 | 4.69e-08 | 0.52 | FALSE |
| BLA | Nab1 | gene expression | Nab1 | 0.16 | 1392 | 0.05 | 9.1e-04 | 5.22 | 1.78e-07 | 0.62 | FALSE |
| BLA | Tgfbrap1 | gene expression | Tgfbrap1 | 0.26 | 1 | 0.1 | 8.1e-06 | -5.5 | 3.89e-08 | 0.19 | FALSE |
| BLA | Wdr75 | gene expression | Wdr75 | 0.37 | 192 | 0.31 | 5.1e-17 | 5.97 | 2.41e-09 | 0.33 | FALSE |
| BLA | Osgepl1 | isoform ratio | NR_172073.1 | 0.05 | 2337 | 0.02 | 3.1e-02 | -5.35 | 8.83e-08 | 0.15 | FALSE |
| BLA | Osgepl1 | intron excision ratio | chr9_48221742_48223241 | 0.16 | 50 | 0.13 | 2.8e-07 | -6.36 | 2.04e-10 | 0.5 | FALSE |
| BLA | Osgepl1 | intron excision ratio | chr9_48221742_48223370 | 0.16 | 51 | 0.13 | 2.6e-07 | 6.36 | 2.03e-10 | 0.5 | FALSE |
| BLA | Hibch | mRNA stability | Hibch | 0.32 | 29 | 0.32 | 1.0e-17 | -5.94 | 2.88e-09 | 0.28 | FALSE |
| BLA | Mrps9 | mRNA stability | Mrps9 | 0.33 | 1 | 0.21 | 9.8e-12 | 5.54 | 3.09e-08 | 0.45 | FALSE |
| BLA | Nck2 | mRNA stability | Nck2 | 0.12 | 1 | 0.08 | 4.1e-05 | -5.22 | 1.75e-07 | 0.06 | FALSE |
| BLA | Pms1 | mRNA stability | Pms1 | 0.13 | 9 | 0.12 | 9.2e-07 | 5.99 | 2.15e-09 | 0.37 | FALSE |
| BLA | RGD1310553 | mRNA stability | RGD1310553 | 0.06 | 1 | 0.09 | 1.8e-05 | -5.59 | 2.29e-08 | 0.08 | FALSE |
| BLA | Tgfbrap1 | mRNA stability | Tgfbrap1 | 0.09 | 1 | 0.12 | 7.4e-07 | -5.37 | 8.00e-08 | 0.14 | FALSE |
| BLA | Wdr75 | mRNA stability | Wdr75 | 0.04 | 1 | 0.02 | 4.2e-02 | -6.26 | 3.94e-10 | 0.04 | FALSE |
| Brain | Tex30 | alternative TSS | XM_039083283.1 | 0.04 | 1192 | 0.02 | 2.6e-03 | 5.24 | 1.62e-07 | 0.42 | FALSE |
| Brain | Asnsd1 | gene expression | Asnsd1 | 0.04 | 7 | 0.02 | 4.2e-03 | -5.23 | 1.68e-07 | 0.17 | FALSE |
| Brain | LOC685203 | gene expression | LOC685203 | 0.09 | 2223 | 0.07 | 5.8e-07 | 5.22 | 1.77e-07 | 0.47 | FALSE |
| Brain | Mfsd6 | gene expression | Mfsd6 | 0.5 | 1 | 0.22 | 5.0e-20 | -5.23 | 1.72e-07 | 0.04 | FALSE |
| Brain | Tex30 | gene expression | Tex30 | 0.05 | 1192 | 0.04 | 9.5e-05 | 5.21 | 1.88e-07 | 0.47 | FALSE |
| Brain | Wdr75 | gene expression | Wdr75 | 0.21 | 2187 | 0.24 | 1.7e-22 | -6.34 | 2.33e-10 | 0.34 | FALSE |
| Brain | LOC120094677 | isoform ratio | XR_005489123.1 | 0.03 | 1 | 0.03 | 8.6e-04 | 5.34 | 9.37e-08 | 0.04 | FALSE |
| Brain | LOC120094677 | isoform ratio | XR_005489124.1 | 0.03 | 1 | 0.03 | 7.3e-04 | -5.34 | 9.37e-08 | 0.04 | FALSE |
| Brain | LOC685203 | isoform ratio | XM_008767148.3 | 0.07 | 1 | 0.05 | 2.6e-05 | -6.02 | 1.79e-09 | 0.32 | FALSE |
| Brain | LOC685203 | isoform ratio | XM_039084567.1 | 0.04 | 2223 | 0.02 | 4.1e-03 | -6.09 | 1.10e-09 | 0.53 | FALSE |
| Brain | Ormdl1 | isoform ratio | NM_001134704.2 | 0.07 | 6 | 0.05 | 3.8e-05 | 6.27 | 3.50e-10 | 0.36 | FALSE |
| Brain | Ormdl1 | isoform ratio | XM_039082897.1 | 0.07 | 7 | 0.05 | 3.5e-05 | -6.26 | 3.83e-10 | 0.37 | FALSE |
| Brain | Pms1 | isoform ratio | XM_039084043.1 | 0.06 | 2337 | 0.02 | 2.5e-03 | -5.37 | 7.98e-08 | 0.13 | FALSE |
| Brain | RGD1310553 | isoform ratio | NM_001008517.2 | 0.04 | 9 | 0.04 | 5.8e-05 | -6.19 | 5.86e-10 | 0.29 | FALSE |
| Brain | RGD1310553 | isoform ratio | XM_039083263.1 | 0.04 | 9 | 0.04 | 7.9e-05 | 6.19 | 5.84e-10 | 0.29 | FALSE |
| Brain | Ercc5 | intron excision ratio | chr9_46315189_46315723 | 0.03 | 2 | 0.01 | 1.5e-02 | -5.41 | 6.38e-08 | 0.37 | FALSE |
| Brain | Ercc5 | intron excision ratio | chr9_46344066_46350281 | 0.05 | 1154 | 0.05 | 2.5e-05 | -5.23 | 1.71e-07 | 0.5 | FALSE |
| Brain | LOC120094678 | intron excision ratio | chr9_44623199_44624206 | 0.04 | 11 | 0.01 | 3.5e-02 | 5.77 | 7.94e-09 | 0.4 | FALSE |
| Brain | LOC120094678 | intron excision ratio | chr9_44623199_44676041 | 0.06 | 30 | 0.05 | 3.7e-05 | 5.8 | 6.59e-09 | 0.46 | FALSE |
| Brain | LOC685203 | intron excision ratio | chr9_48559735_48584017 | 0.2 | 1 | 0.13 | 6.8e-12 | 5.96 | 2.47e-09 | 0.52 | FALSE |
| Brain | Osgepl1 | intron excision ratio | chr9_48221742_48223241 | 0.11 | 2337 | 0.11 | 3.2e-10 | 5.5 | 3.85e-08 | 0.36 | FALSE |
| Brain | Pantr1 | intron excision ratio | chr9_44916870_44943551 | 0.05 | 1 | 0.02 | 3.1e-03 | 5.3 | 1.16e-07 | 0.03 | FALSE |
| Brain | RGD1310553 | intron excision ratio | chr9_45373526_45377235 | 0.03 | 1 | 0.04 | 2.1e-04 | -5.22 | 1.75e-07 | 0.03 | FALSE |
| Brain | Gulp1 | mRNA stability | Gulp1 | 0.06 | 16 | 0.06 | 2.2e-06 | 5.67 | 1.42e-08 | 0.59 | FALSE |
| Brain | LOC120094677 | mRNA stability | LOC120094677 | 0.06 | 1 | 0.06 | 6.8e-06 | 5.25 | 1.51e-07 | 0.32 | TRUE |
| Brain | LOC685203 | mRNA stability | LOC685203 | 0.07 | 2223 | 0.05 | 4.2e-05 | 5.78 | 7.37e-09 | 0.62 | FALSE |
| Brain | Mrps9 | mRNA stability | Mrps9 | 0.32 | 2977 | 0.29 | 8.8e-27 | -5.7 | 1.22e-08 | 0.33 | FALSE |
| Brain | Nck2 | mRNA stability | Nck2 | 0.09 | 1 | 0.09 | 1.6e-08 | -5.56 | 2.77e-08 | 0.49 | FALSE |
| Brain | Osgepl1 | mRNA stability | Osgepl1 | 0.04 | 1 | 0.05 | 3.5e-05 | -6.29 | 3.09e-10 | 0.06 | FALSE |
| Brain | Pms1 | mRNA stability | Pms1 | 0.76 | 2337 | 0.08 | 4.2e-08 | -5.57 | 2.59e-08 | 0.16 | FALSE |
| Brain | RGD1310553 | mRNA stability | RGD1310553 | 0.16 | 1 | 0.11 | 4.9e-10 | -5.41 | 6.20e-08 | 0.26 | FALSE |
| Brain | Tgfbrap1 | mRNA stability | Tgfbrap1 | 0.06 | 1 | 0.05 | 2.5e-05 | -5.34 | 9.09e-08 | 0.11 | FALSE |
| Brain | Wdr75 | mRNA stability | Wdr75 | 0.18 | 64 | 0.2 | 1.5e-18 | 6.6 | 4.09e-11 | 0.41 | FALSE |
| Eye | Mfsd6 | alternative TSS | NM_001106911.1 | 0.33 | 1 | 0.01 | 2.5e-01 | 5.75 | 8.87e-09 | 0.06 | FALSE |
| Eye | RGD1310553 | gene expression | RGD1310553 | 0.33 | 1 | 0.17 | 1.3e-03 | -5.37 | 8.02e-08 | 0.05 | FALSE |
| Eye | Tgfbrap1 | gene expression | Tgfbrap1 | 0.38 | 1 | 0.19 | 7.4e-04 | -5.37 | 8.02e-08 | 0.05 | FALSE |
| Eye | Ercc5 | intron excision ratio | chr9_46339662_46343922 | 0.6 | 1 | 0.19 | 7.0e-04 | -5.22 | 1.75e-07 | 0.06 | FALSE |
| IL | Osgepl1 | alternative polyA | NM_001394070.1 | 0.19 | 40 | 0.13 | 6.4e-04 | 5.44 | 5.18e-08 | 0.2 | FALSE |
| IL | Osgepl1 | alternative polyA | NM_001394068.1 | 0.15 | 39 | 0.1 | 2.7e-03 | -5.5 | 3.74e-08 | 0.23 | FALSE |
| IL | Osgepl1 | alternative polyA | NM_001394070.1 | 0.15 | 36 | 0.09 | 2.9e-03 | 5.6 | 2.20e-08 | 0.23 | FALSE |
| IL | Inpp1 | alternative TSS | NM_001012131.1 | 0.15 | 1952 | 0.08 | 6.2e-03 | -5.35 | 8.56e-08 | 0.24 | FALSE |
| IL | Pantr1 | gene expression | Pantr1 | 0.46 | 1 | 0.16 | 1.2e-04 | -5.22 | 1.78e-07 | 0.05 | FALSE |
| IL | Srsf7-ps4 | gene expression | Srsf7-ps4 | 0.41 | 15 | 0.2 | 1.5e-05 | 5.66 | 1.51e-08 | 0.52 | FALSE |
| IL | Wdr75 | gene expression | Wdr75 | 0.44 | 1 | 0.16 | 1.5e-04 | 6.44 | 1.18e-10 | 0.05 | FALSE |
| IL | Ormdl1 | isoform ratio | NM_001134704.2 | 0.18 | 2311 | 0.08 | 5.8e-03 | -5.3 | 1.16e-07 | 0.17 | FALSE |
| IL | Ormdl1 | isoform ratio | XM_039082897.1 | 0.16 | 2311 | 0.07 | 7.5e-03 | 5.36 | 8.53e-08 | 0.19 | FALSE |
| IL | Nck2 | intron excision ratio | chr9_45803030_45824030 | 0.18 | 2431 | 0.04 | 4.0e-02 | -5.61 | 2.04e-08 | 0.21 | FALSE |
| IL | Hibch | mRNA stability | Hibch | 0.27 | 26 | 0.1 | 1.8e-03 | 5.86 | 4.66e-09 | 0.44 | FALSE |
| IL | Mrps9 | mRNA stability | Mrps9 | 0.4 | 2977 | 0.11 | 1.1e-03 | -5.65 | 1.59e-08 | 0.22 | FALSE |
| IL | Nck2 | mRNA stability | Nck2 | 0.22 | 1 | 0.11 | 1.7e-03 | -5.47 | 4.45e-08 | 0.05 | FALSE |
| IL | Pms1 | mRNA stability | Pms1 | 0.35 | 1 | 0.14 | 3.8e-04 | 6.3 | 2.98e-10 | 0.05 | FALSE |
| LHb | Hibch | gene expression | Hibch | 0.46 | 1971 | 0.09 | 4.6e-03 | 5.42 | 6.03e-08 | 0.28 | FALSE |
| LHb | Mstn | gene expression | Mstn | 0.23 | 2211 | 0.02 | 1.2e-01 | 6.13 | 8.81e-10 | 0.22 | FALSE |
| LHb | RGD1310553 | gene expression | RGD1310553 | 0.5 | 1 | 0.17 | 7.3e-05 | -5.34 | 9.08e-08 | 0.05 | FALSE |
| LHb | Ormdl1 | isoform ratio | NM_001134704.2 | 0.21 | 1 | 0.01 | 1.6e-01 | 6.42 | 1.37e-10 | 0.05 | FALSE |
| LHb | Ormdl1 | isoform ratio | XM_039082897.1 | 0.22 | 1 | 0.01 | 1.5e-01 | -6.42 | 1.37e-10 | 0.05 | FALSE |
| LHb | Mrps9 | intron excision ratio | chr9_45170461_45172088 | 0.21 | 20 | 0.04 | 3.9e-02 | 5.76 | 8.48e-09 | 0.21 | FALSE |
| Liver | Osgepl1 | alternative polyA | NM_001394070.1 | 0.1 | 2335 | 0.04 | 3.2e-05 | -5.38 | 7.36e-08 | 0.35 | FALSE |
| Liver | Osgepl1 | alternative polyA | NM_001394068.1 | 0.11 | 2335 | 0.04 | 4.9e-05 | 5.25 | 1.53e-07 | 0.3 | FALSE |
| Liver | Osgepl1 | alternative polyA | NM_001394070.1 | 0.11 | 2335 | 0.04 | 4.9e-05 | -5.29 | 1.19e-07 | 0.32 | FALSE |
| Liver | Nck2 | alternative TSS | NM_001108216.1 | 0.1 | 1 | 0.03 | 1.7e-04 | -5.52 | 3.33e-08 | 0.04 | FALSE |
| Liver | Nck2 | alternative TSS | XM_006244825.4 | 0.11 | 1 | 0.04 | 7.5e-05 | 5.51 | 3.57e-08 | 0.06 | TRUE |
| Liver | Ccdc168 | gene expression | Ccdc168 | 0.14 | 1188 | 0.04 | 2.0e-05 | 5.23 | 1.74e-07 | 0.48 | FALSE |
| Liver | Inpp1 | gene expression | Inpp1 | 0.14 | 1950 | 0.05 | 5.4e-06 | -5.88 | 4.10e-09 | 0.64 | FALSE |
| Liver | Mrps9 | gene expression | Mrps9 | 0.2 | 28 | 0.13 | 2.6e-14 | -5.4 | 6.60e-08 | 0.32 | TRUE |
| Liver | Nck2 | gene expression | Nck2 | 0.82 | 2429 | 0.39 | 8.7e-46 | 5.67 | 1.44e-08 | 0.58 | FALSE |
| Liver | Ormdl1 | gene expression | Ormdl1 | 0.05 | 2309 | 0.02 | 4.4e-03 | -6.11 | 1.02e-09 | 0.34 | FALSE |
| Liver | Osgepl1 | gene expression | Osgepl1 | 0.03 | 1 | 0.02 | 5.1e-03 | 6.28 | 3.43e-10 | 0.03 | FALSE |
| Liver | Pms1 | gene expression | Pms1 | 0.06 | 1 | 0.01 | 1.8e-02 | 6.09 | 1.11e-09 | 0.03 | FALSE |
| Liver | Slc40a1 | gene expression | Slc40a1 | 0.19 | 2543 | 0.1 | 5.9e-11 | 6.28 | 3.48e-10 | 0.38 | FALSE |
| Liver | Tgfbrap1 | gene expression | Tgfbrap1 | 0.09 | 1 | 0.08 | 7.8e-09 | -5.57 | 2.62e-08 | 0.44 | FALSE |
| Liver | Wdr75 | gene expression | Wdr75 | 0.06 | 1 | 0.02 | 9.6e-04 | 6.49 | 8.80e-11 | 0.05 | FALSE |
| Liver | Hibch | isoform ratio | NM_001398668.1 | 0.16 | 1 | 0.03 | 1.9e-04 | -5.96 | 2.47e-09 | 0.16 | FALSE |
| Liver | Asdurf | intron excision ratio | chr9_48126949_48128543 | 0.03 | 2376 | 0 | 1.6e-01 | 6.08 | 1.21e-09 | 0.24 | FALSE |
| Liver | Asdurf | intron excision ratio | chr9_48126954_48128543 | 0.03 | 2376 | 0 | 1.3e-01 | -6.03 | 1.62e-09 | 0.25 | FALSE |
| Liver | Asnsd1 | intron excision ratio | chr9_48126949_48128543 | 0.03 | 2376 | 0 | 1.6e-01 | 6.08 | 1.21e-09 | 0.24 | FALSE |
| Liver | Asnsd1 | intron excision ratio | chr9_48126954_48128543 | 0.03 | 2376 | 0 | 1.3e-01 | -6.03 | 1.62e-09 | 0.25 | FALSE |
| Liver | Bivm | intron excision ratio | chr9_46284450_46289214 | 0.06 | 10 | 0.04 | 1.5e-05 | -5.38 | 7.53e-08 | 0.49 | FALSE |
| Liver | Mrps9 | intron excision ratio | chr9_45166282_45170292 | 0.11 | 1 | 0.05 | 5.6e-06 | 5.46 | 4.71e-08 | 0.19 | FALSE |
| Liver | Tgfbrap1 | intron excision ratio | chr9_45348544_45353406 | 0.17 | 1 | 0.13 | 1.8e-14 | -5.52 | 3.30e-08 | 0.39 | FALSE |
| Liver | Mrps9 | mRNA stability | Mrps9 | 0.15 | 2976 | 0.08 | 4.2e-09 | -6.03 | 1.64e-09 | 0.32 | FALSE |
| Liver | Nck2 | mRNA stability | Nck2 | 0.32 | 2429 | 0.08 | 1.4e-09 | 5.74 | 9.66e-09 | 0.54 | FALSE |
| Liver | Pms1 | mRNA stability | Pms1 | 0.16 | 10 | 0.08 | 4.7e-09 | -5.44 | 5.19e-08 | 0.09 | FALSE |
| Liver | Tgfbrap1 | mRNA stability | Tgfbrap1 | 0.03 | 1 | 0.02 | 2.5e-03 | -5.57 | 2.62e-08 | 0.03 | FALSE |
| Liver | Wdr75 | mRNA stability | Wdr75 | 0.05 | 2185 | 0.03 | 3.1e-04 | 6.32 | 2.68e-10 | 0.36 | FALSE |
| NAcc | Osgepl1 | alternative polyA | NM_001394070.1 | 0.03 | 73 | 0.02 | 1.4e-03 | 5.85 | 4.85e-09 | 0.24 | FALSE |
| NAcc | Osgepl1 | alternative polyA | NM_001394068.1 | 0.03 | 2337 | 0.01 | 1.0e-02 | 5.66 | 1.52e-08 | 0.23 | FALSE |
| NAcc | Osgepl1 | alternative polyA | NM_001394070.1 | 0.03 | 113 | 0.02 | 2.5e-03 | 6.05 | 1.46e-09 | 0.26 | FALSE |
| NAcc | Mfsd6 | alternative TSS | XM_017596349.2 | 0.05 | 47 | 0.03 | 1.3e-04 | -5.51 | 3.51e-08 | 0.1 | FALSE |
| NAcc | Col5a2 | gene expression | Col5a2 | 0.03 | 1660 | 0.02 | 8.0e-04 | -6.72 | 1.79e-11 | 0.42 | TRUE |
| NAcc | Hibch | gene expression | Hibch | 0.08 | 1971 | 0.08 | 1.9e-09 | 5.25 | 1.50e-07 | 0.07 | FALSE |
| NAcc | LOC120094678 | gene expression | LOC120094678 | 0.2 | 66 | 0.15 | 4.4e-17 | -5.52 | 3.47e-08 | 0.11 | FALSE |
| NAcc | LOC685203 | gene expression | LOC685203 | 0.06 | 1 | 0.06 | 5.6e-08 | -6.03 | 1.67e-09 | 0.6 | FALSE |
| NAcc | Pantr1 | gene expression | Pantr1 | 0.07 | 1 | 0.04 | 1.3e-05 | -5.36 | 8.44e-08 | 0.13 | FALSE |
| NAcc | Wdr75 | gene expression | Wdr75 | 0.25 | 26 | 0.17 | 9.9e-19 | -6.57 | 4.91e-11 | 0.45 | FALSE |
| NAcc | Mfsd6 | isoform ratio | XM_017596349.2 | 0.03 | 40 | 0.03 | 1.7e-04 | -5.34 | 9.52e-08 | 0.08 | FALSE |
| NAcc | Ormdl1 | isoform ratio | NM_001134704.2 | 0.09 | 7 | 0.07 | 1.2e-08 | -5.97 | 2.35e-09 | 0.19 | FALSE |
| NAcc | Ormdl1 | isoform ratio | XM_039082897.1 | 0.1 | 2311 | 0.08 | 1.6e-09 | 5.76 | 8.64e-09 | 0.17 | FALSE |
| NAcc | Osgepl1 | isoform ratio | NM_001394068.1 | 0.04 | 2337 | 0.04 | 3.4e-05 | 6.16 | 7.47e-10 | 0.34 | FALSE |
| NAcc | RGD1310553 | isoform ratio | NM_001008517.2 | 0.03 | 2965 | 0.01 | 4.0e-02 | 6.07 | 1.32e-09 | 0.23 | FALSE |
| NAcc | RGD1310553 | isoform ratio | XM_039083263.1 | 0.03 | 2965 | 0.01 | 2.6e-02 | -6.05 | 1.42e-09 | 0.23 | FALSE |
| NAcc | LOC102547518 | intron excision ratio | chr9_44943995_45025905 | 0.02 | 1 | 0.01 | 6.0e-03 | -5.44 | 5.31e-08 | 0.03 | FALSE |
| NAcc | LOC685203 | intron excision ratio | chr9_48559735_48584017 | 0.1 | 1 | 0.05 | 3.7e-06 | 5.96 | 2.54e-09 | 0.45 | FALSE |
| NAcc | LOC685203 | intron excision ratio | chr9_48560309_48584017 | 0.04 | 2223 | 0.04 | 6.3e-05 | 5.98 | 2.18e-09 | 0.6 | FALSE |
| NAcc | Osgepl1 | intron excision ratio | chr9_48221742_48223241 | 0.19 | 1 | 0.03 | 2.2e-04 | -6.01 | 1.84e-09 | 0.03 | FALSE |
| NAcc | Mrps9 | mRNA stability | Mrps9 | 0.29 | 2977 | 0.24 | 2.0e-27 | -5.43 | 5.68e-08 | 0.33 | FALSE |
| NAcc | Pms1 | mRNA stability | Pms1 | 0.13 | 1 | 0.05 | 2.1e-06 | 5.96 | 2.54e-09 | 0.03 | FALSE |
| NAcc | RGD1310553 | mRNA stability | RGD1310553 | 0.07 | 5 | 0.1 | 9.8e-12 | -5.73 | 1.01e-08 | 0.3 | TRUE |
| NAcc | Wdr75 | mRNA stability | Wdr75 | 0.05 | 1 | 0.05 | 1.5e-06 | -6.49 | 8.80e-11 | 0.28 | FALSE |
| OFC | Mstn | gene expression | Mstn | 0.4 | 2211 | 0.14 | 3.1e-04 | -5.62 | 1.90e-08 | 0.46 | FALSE |
| OFC | Tex30 | gene expression | Tex30 | 0.18 | 1 | 0.04 | 3.9e-02 | -5.18 | 2.22e-07 | 0.05 | FALSE |
| OFC | Wdr75 | gene expression | Wdr75 | 0.55 | 1 | 0.23 | 4.2e-06 | 6.58 | 4.85e-11 | 0.09 | FALSE |
| OFC | Mrps9 | mRNA stability | Mrps9 | 0.37 | 1 | 0.08 | 6.7e-03 | 5.21 | 1.87e-07 | 0.05 | FALSE |
| PL | Osgepl1 | alternative polyA | NM_001394070.1 | 0.05 | 2337 | 0.04 | 9.8e-05 | -6.25 | 4.23e-10 | 0.36 | FALSE |
| PL | Osgepl1 | alternative polyA | NM_001394068.1 | 0.05 | 2337 | 0.04 | 3.4e-05 | 6.23 | 4.72e-10 | 0.38 | FALSE |
| PL | Osgepl1 | alternative polyA | NM_001394070.1 | 0.05 | 2337 | 0.04 | 3.4e-05 | -6.21 | 5.36e-10 | 0.38 | FALSE |
| PL | Gpr45 | alternative TSS | NM_001106906.1 | 0.05 | 3052 | 0.04 | 2.5e-05 | -5.97 | 2.41e-09 | 0.3 | FALSE |
| PL | Gpr45 | alternative TSS | XM_039083259.1 | 0.05 | 3052 | 0.04 | 1.8e-05 | 5.96 | 2.56e-09 | 0.3 | FALSE |
| PL | Ormdl1 | alternative TSS | XM_039082897.1 | 0.13 | 23 | 0.03 | 1.4e-04 | -5.34 | 9.38e-08 | 0.01 | FALSE |
| PL | Tex30 | alternative TSS | XM_039083278.1 | 0.13 | 38 | 0.19 | 4.2e-20 | 5.45 | 5.05e-08 | 0.48 | FALSE |
| PL | Asnsd1 | gene expression | Asnsd1 | 0.03 | 2377 | 0.02 | 2.0e-03 | -5.19 | 2.06e-07 | 0.21 | FALSE |
| PL | Col5a2 | gene expression | Col5a2 | 0.02 | 1 | 0.01 | 1.5e-02 | -6.64 | 3.19e-11 | 0.04 | FALSE |
| PL | Ecrg4 | gene expression | Ecrg4 | 0.06 | 1 | 0.05 | 4.6e-06 | 5.46 | 4.70e-08 | 0.43 | FALSE |
| PL | Gpr45 | gene expression | Gpr45 | 0.07 | 3052 | 0.09 | 1.2e-09 | 5.22 | 1.77e-07 | 0.3 | FALSE |
| PL | LOC102547455 | gene expression | LOC102547455 | 0.05 | 1 | 0.03 | 2.5e-04 | -5.34 | 9.08e-08 | 0.05 | FALSE |
| PL | LOC108351921 | gene expression | LOC108351921 | 0.04 | 16 | 0.02 | 1.9e-03 | 5.22 | 1.82e-07 | 0.64 | FALSE |
| PL | LOC685203 | gene expression | LOC685203 | 0.28 | 10 | 0.22 | 6.7e-24 | 5.27 | 1.37e-07 | 0.3 | FALSE |
| PL | Mstn | gene expression | Mstn | 0.08 | 2211 | 0.05 | 8.4e-06 | -5.19 | 2.06e-07 | 0.39 | FALSE |
| PL | Pantr1 | gene expression | Pantr1 | 0.3 | 1 | 0.26 | 7.3e-29 | -5.2 | 2.04e-07 | 0.13 | FALSE |
| PL | Tex30 | gene expression | Tex30 | 0.09 | 18 | 0.1 | 8.2e-11 | 5.75 | 8.95e-09 | 0.49 | FALSE |
| PL | Wdr75 | gene expression | Wdr75 | 0.54 | 2187 | 0.32 | 1.9e-36 | -6.71 | 1.99e-11 | 0.41 | FALSE |
| PL | Inpp1 | isoform ratio | XM_006244899.4 | 0.07 | 1952 | 0.04 | 9.8e-05 | -5.18 | 2.23e-07 | 0.17 | FALSE |
| PL | Inpp1 | isoform ratio | XM_008767092.2 | 0.04 | 1 | 0.01 | 3.8e-02 | 5.33 | 9.59e-08 | 0.03 | TRUE |
| PL | LOC685203 | isoform ratio | XM_008767148.3 | 0.05 | 2223 | 0.04 | 9.2e-05 | 6.12 | 9.20e-10 | 0.64 | FALSE |
| PL | LOC685203 | isoform ratio | XM_039084567.1 | 0.04 | 1 | 0.03 | 1.5e-04 | 6.02 | 1.78e-09 | 0.27 | FALSE |
| PL | Ormdl1 | isoform ratio | NM_001134704.2 | 0.02 | 2311 | 0.02 | 6.2e-03 | -6.18 | 6.43e-10 | 0.36 | FALSE |
| PL | Ormdl1 | isoform ratio | XM_039082897.1 | 0.03 | 2311 | 0.02 | 3.3e-03 | 6.19 | 5.96e-10 | 0.39 | FALSE |
| PL | Osgepl1 | isoform ratio | NM_001394068.1 | 0.08 | 2337 | 0.08 | 1.9e-09 | 6.28 | 3.43e-10 | 0.34 | FALSE |
| PL | LOC685203 | intron excision ratio | chr9_48560309_48584017 | 0.05 | 2223 | 0.03 | 5.1e-04 | 5.55 | 2.93e-08 | 0.5 | FALSE |
| PL | Mrps9 | intron excision ratio | chr9_45166282_45170292 | 0.06 | 1 | 0.03 | 1.4e-04 | -5.26 | 1.47e-07 | 0.06 | FALSE |
| PL | Mrps9 | intron excision ratio | chr9_45170461_45172088 | 0.15 | 2977 | 0.11 | 2.3e-12 | -5.48 | 4.17e-08 | 0.33 | FALSE |
| PL | Osgepl1 | intron excision ratio | chr9_48221742_48223241 | 0.33 | 63 | 0.13 | 6.0e-14 | 6.09 | 1.13e-09 | 0.07 | FALSE |
| PL | Osgepl1 | intron excision ratio | chr9_48221742_48223370 | 0.29 | 40 | 0.13 | 8.1e-14 | -6.04 | 1.51e-09 | 0.07 | FALSE |
| PL | Pantr1 | intron excision ratio | chr9_44916870_44943551 | 0.03 | 1 | 0.02 | 1.3e-03 | 5.22 | 1.82e-07 | 0.03 | FALSE |
| PL | Pms1 | intron excision ratio | chr9_48253475_48262367 | 0.04 | 2337 | 0.03 | 2.6e-04 | 6.39 | 1.65e-10 | 0.5 | FALSE |
| PL | Hibch | mRNA stability | Hibch | 0.38 | 1971 | 0.35 | 2.6e-39 | -5.88 | 4.09e-09 | 0.7 | FALSE |
| PL | LOC685203 | mRNA stability | LOC685203 | 0.07 | 15 | 0.06 | 6.7e-07 | 5.79 | 7.21e-09 | 0.63 | FALSE |
| PL | Mrps9 | mRNA stability | Mrps9 | 0.35 | 2 | 0.25 | 9.6e-27 | -5.86 | 4.58e-09 | 0.33 | FALSE |
| PL | Pms1 | mRNA stability | Pms1 | 0.07 | 4 | 0.07 | 7.9e-08 | -6.3 | 2.96e-10 | 0.3 | FALSE |
| PL | RGD1310553 | mRNA stability | RGD1310553 | 0.03 | 2965 | 0.02 | 1.5e-03 | 5.9 | 3.53e-09 | 0.25 | FALSE |
| PL | Tgfbrap1 | mRNA stability | Tgfbrap1 | 0.08 | 1 | 0.1 | 2.0e-11 | -5.43 | 5.60e-08 | 0.28 | FALSE |
| PL | Wdr75 | mRNA stability | Wdr75 | 0.07 | 2187 | 0.08 | 4.0e-09 | 6.42 | 1.33e-10 | 0.4 | FALSE |
| pVTA | Gpr45 | alternative TSS | NM_001106906.1 | 0.12 | 1 | 0.09 | 7.8e-05 | 5.44 | 5.36e-08 | 0.06 | FALSE |
| pVTA | Gpr45 | alternative TSS | XM_039083259.1 | 0.11 | 3052 | 0.08 | 3.3e-04 | 5.21 | 1.91e-07 | 0.29 | FALSE |
| pVTA | LOC120094678 | gene expression | LOC120094678 | 0.19 | 1950 | 0.14 | 1.8e-06 | 5.46 | 4.89e-08 | 0.21 | FALSE |
| pVTA | Mrps9 | gene expression | Mrps9 | 0.14 | 1 | 0.08 | 2.8e-04 | -5.2 | 2.04e-07 | 0.04 | FALSE |
| pVTA | RGD1310553 | gene expression | RGD1310553 | 0.31 | 1 | 0.16 | 2.6e-07 | -5.55 | 2.85e-08 | 0.35 | FALSE |
| pVTA | Wdr75 | gene expression | Wdr75 | 0.11 | 24 | 0.03 | 2.3e-02 | 5.3 | 1.18e-07 | 0.22 | FALSE |
| pVTA | Mfsd6 | isoform ratio | XM_006244898.4 | 0.72 | 3 | 0.06 | 2.2e-03 | -5.74 | 9.74e-09 | 0.06 | FALSE |
| pVTA | LOC685203 | intron excision ratio | chr9_48559735_48584017 | 0.15 | 2223 | 0.12 | 4.8e-06 | -6.02 | 1.70e-09 | 0.62 | FALSE |
| pVTA | Osgepl1 | intron excision ratio | chr9_48221742_48223241 | 0.09 | 2337 | 0.06 | 8.8e-04 | 6.29 | 3.09e-10 | 0.38 | FALSE |
| pVTA | Osgepl1 | intron excision ratio | chr9_48221742_48223370 | 0.08 | 2337 | 0.06 | 2.1e-03 | -6.29 | 3.20e-10 | 0.35 | FALSE |
| pVTA | Mrps9 | mRNA stability | Mrps9 | 0.19 | 1 | 0.07 | 7.3e-04 | 5.54 | 3.09e-08 | 0.05 | FALSE |
| pVTA | RGD1310553 | mRNA stability | RGD1310553 | 0.15 | 12 | 0.11 | 1.3e-05 | 5.86 | 4.75e-09 | 0.27 | FALSE |
| pVTA | Tgfbrap1 | mRNA stability | Tgfbrap1 | 0.2 | 1 | 0.04 | 6.2e-03 | -5.42 | 5.85e-08 | 0.04 | FALSE |
| pVTA | Wdr75 | mRNA stability | Wdr75 | 0.13 | 2187 | 0.04 | 6.1e-03 | 5.98 | 2.22e-09 | 0.26 | FALSE |
| RMTg | Mfsd6 | gene expression | Mfsd6 | 0.17 | 1 | 0.09 | 2.5e-03 | -5.23 | 1.68e-07 | 0.05 | FALSE |
| RMTg | RGD1310553 | gene expression | RGD1310553 | 0.11 | 1 | 0.05 | 2.1e-02 | -5.26 | 1.44e-07 | 0.05 | FALSE |
| RMTg | Wdr75 | gene expression | Wdr75 | 0.18 | 2187 | 0.08 | 3.6e-03 | -6.24 | 4.29e-10 | 0.35 | FALSE |
| RMTg | Ercc5 | intron excision ratio | chr9_46344066_46349969 | 0.16 | 18 | 0.18 | 1.5e-05 | 5.72 | 1.07e-08 | 0.49 | FALSE |
| RMTg | Ercc5 | intron excision ratio | chr9_46344066_46350281 | 0.1 | 48 | 0.07 | 6.1e-03 | 5.35 | 8.96e-08 | 0.36 | FALSE |
| RMTg | Pantr1 | intron excision ratio | chr9_44916870_44941750 | 0.13 | 1 | 0.12 | 3.6e-04 | -5.29 | 1.23e-07 | 0.05 | FALSE |
| RMTg | Tgfbrap1 | mRNA stability | Tgfbrap1 | 0.41 | 53 | 0.09 | 1.9e-03 | -5.29 | 1.22e-07 | 0.17 | FALSE |
| RMTg | Wdr75 | mRNA stability | Wdr75 | 0.15 | 1 | 0.07 | 6.0e-03 | -6.19 | 6.15e-10 | 0.05 | FALSE |